| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_11735 |
|---|
| Symbol | |
|---|
| ID | 7199957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | - |
|---|
| Start bp | 804799 |
|---|
| End bp | 805968 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179511 |
|---|
| Protein GI | 219117433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGG AACAACAGAA GCAGGAACTT GATTTCTATC AGGAAGTCAA GGGCCTTGAA
AAGCAGCTCG AATTCGTCTC TCTGCAAGAA GAGTACCTGA AGGACGAAAT GCGTCACCTG
CAGCGAGAAC TTTTACGGGC AAAGGAAGAG GTTCGCCGCA TTCAATCGGT TCCTCTCGTG
ATTGGACAAT TTAACGAAAT GATCGACGCC AAGTACGGCA TTGTTTCCAG TACAGCTGGT
TCCAATTACT ACGTCCGCAT CCTTAGTACC CTGGATCGAG AGCTCTTGAA GCCTAACACG
TCTATTGCAT TACACCGTCA CTCTCATTCT GTGGTTGACA TTTTGCCGCC GGAGTCTGAT
TCGACGGTTA AACTCATGTC TGAGAAGCCT GACGTGACTT ACAAAGATAT TGGTGGGATG
GATATACAGA AACAGGAAGT TCGCGAAGCG ATCGAACTTC CTCTCCTCCA ACATCACCTA
TACCAGCAAA TCGGAATTGA TCCTCCCCGG GGTGTCCTTT TGTATGGGCC TCCCGGTACA
GGAAAAACCA TGATGGCAAA GGCGGTGGCC AACGCTACCA AGGCGACCTT TATTTCCATG
GTTGGGTCCG AGTTCGTGCA AAAATACCTA GGTGAAGGTC CCCGTATGGT GCGTGACGTC
TTCCGTTTGG CGCGGGAAAA TTCCCCTTGT ATTGTCTTTA TTGATGAGAT CGATGCCATT
GCGACCAAGC GGTTTGATGC TCAGACTGGG GCCGATAGGG AAGTCCAGCG TATTCTCCTA
GAACTGTTAA ACCAAATGGA CGGTTTCGAT CAAACGACCA ACATCAAGGT CATTATGGCA
ACCAATCGTG CGGACACGCT AGATCCTGCG TTGCTACGTC CGGGACGGTT GGACCGTAAG
ATTGAGTTCC CCAATCCCGA TCGACGACAA AAACGCATGG TCTTTCAAGC CGCTACAACC
AAAATGAACT TATCGGACGA GCTGGACTTG GAAGACTACG TGAACCGGAG CGAAAAGGTT
TCGGCGGCCG ACATCTCGTC GATATGCGCC GAAGCTGGGT TGCAAGCCGT GCGTGAAAAT
CGGTACGTCG TATTGCCAAA GGACTTTGAC GCGGCCTACA AGAAAGCTGT CAGCAATCGT
GAAAAGGAGC ACAATTTTTA TACTATGTAA
|
|---|
| Protein sequence | MDMEQQKQEL DFYQEVKGLE KQLEFVSLQE EYLKDEMRHL QRELLRAKEE VRRIQSVPLV
IGQFNEMIDA KYGIVSSTAG SNYYVRILST LDRELLKPNT SIALHRHSHS VVDILPPESD
STVKLMSEKP DVTYKDIGGM DIQKQEVREA IELPLLQHHL YQQIGIDPPR GVLLYGPPGT
GKTMMAKAVA NATKATFISM VGSEFVQKYL GEGPRMVRDV FRLARENSPC IVFIDEIDAI
ATKRFDAQTG ADREVQRILL ELLNQMDGFD QTTNIKVIMA TNRADTLDPA LLRPGRLDRK
IEFPNPDRRQ KRMVFQAATT KMNLSDELDL EDYVNRSEKV SAADISSICA EAGLQAVREN
RYVVLPKDFD AAYKKAVSNR EKEHNFYTM
|
|---|
| |