Gene PHATRDRAFT_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5543 
Symbol 
ID7199686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp1027638 
End bp1028060 
Gene Length423 bp 
Protein Length141 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179109 
Protein GI219116628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0202221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGTGGTGGC GATTGCTTAC GCCAATTCTC CTACACGCCG GAGTCATTCA TTTGCTTTGT 
AACGTCGCCG TACAAATCGA AGCTGGAGCC TTTTTCGAAC AAGAATGGGG TAGTTTCCGT
TGGCTTGTCG TCTATCTGGC GTCAGCGGTA GGGTCGTCCA TTCTTTCCAT TATTGTCATG
CCTAACGCCG TCTCGGTTGG ATCCTCCGGA GCCCTTATGG GATTGTTCGG AGCGAAACTG
GCGGAAGTAA CACTGCGAGT GTGTGACCGT GCCGATACCG AGCAACAACG AGTCGCCCAT
CAAGTCCGCA AGGAGCAGTG TACCGCAGTA ACCTGCAGCG TCCTCCTTGT CATGCTGTTT
TCCTTTATTC CGTACGTGGA CTGGGCGGCG CATCTCGGTG GTCTCGTGGC CGGCTTTGCG
GTG
 
Protein sequence
QWWRLLTPIL LHAGVIHLLC NVAVQIEAGA FFEQEWGSFR WLVVYLASAV GSSILSIIVM 
PNAVSVGSSG ALMGLFGAKL AEVTLRVCDR ADTEQQRVAH QVRKEQCTAV TCSVLLVMLF
SFIPYVDWAA HLGGLVAGFA V