Gene PHATRDRAFT_51727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_51727 
SymbolRab1b 
ID7199741 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand- 
Start bp215777 
End bp216500 
Gene Length724 bp 
Protein Length208 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178953 
Protein GI219116316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCTA GCAGCTCTTC CAAACAGCGA GACTACGACT ACCTCTTCAA GCTCGTCTTA 
ATTGGAGATA GCGGAGTCGG AAAGTCTTGC CTTTTGCTTC GATTTGCGGT AAGATGAGCG 
ACACGTTTTC GCAAATGACG TCCCTGGACT GCGACGTAGA AACCGTGCTC ACGCATACTT 
CTTTATCTGG CTCGTGGTTC TTCAGGACGA TGCTTTCACT GAGTCGTACA TCAGTACAAT 
TGGAGTAGAC TTTCGTTTCC GAACAGTCAA AATAGACAAG AAAACAGTAA AGTTGCAGAT 
TTGGGACACT GCCGGTCAGG AACGCTTCCG AACAATCACT TCAGCATACT ACCGTGGCGC 
TGACGGAATT ATTATGGTTT TTGACGTGAC AAGCACAGAT TCGTTTGATC ACGTGAATGA 
CTGGTTAAAG GAAGTCAATC GCTACGCAGC GGAAGGTACC GTAAAATTAT TGGTCGGCAA 
TAAATCGGAT CGAACGGCGG ACCGTGTAGT GACAGAGGAG CAAGCGAGAG AATTTGCGGA 
TGAACTGGGT ATTCCCTTCA TAGAGACGTC AGCTAAATCG GCGAAGAATG TAGAGGAAGC 
ATTTCTGACC ATGGCGGGTG AGTTAATTCG GCAACGGGCG GCCCGTAGTG CGGCTGCTGG 
AGGCGGGGAA GAAAAGAAGG GTATTGACTT GCAAGCTGTG AAGGACAAGT CAAATTGTTG 
TTAG
 
Protein sequence
MAPSSSSKQR DYDYLFKLVL IGDSGVGKSC LLLRFADDAF TESYISTIGV DFRFRTVKID 
KKTVKLQIWD TAGQERFRTI TSAYYRGADG IIMVFDVTST DSFDHVNDWL KEVNRYAAEG 
TVKLLVGNKS DRTADRVVTE EQAREFADEL GIPFIETSAK SAKNVEEAFL TMAGELIRQR 
AARSAAAGGG EEKKGIDLQA VKDKSNCC