Gene PHATRDRAFT_51720 details

Gene Information

• Locus tag: PHATRDRAFT_51720
• ID: 7199710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 64932
• End bp: 66938
• Gene Length: 2007 bp
• Protein Length: 668 aa
• GC content: 52%
• Product: fumarate reductase flavoprotein
• Protein accession: XP_002178697
• Protein GI: 219115804

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.744935
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATC TGCAACGCGA AGAAGAACTC GTCCACTTGG CTCTTTCGCG GAATCTCGAT 
TTGCTGATTC TCGCTAAACA TTACGGTACG GACGTACCTC GATTTTACCA GCTATCGACT 
GCTCTGGGAA ATGGGCACGC CGTTGCCTCA GCCAACTCAG AACCCGACGC GATTATTGTT 
GGGAGCGGAC TCGCTGGCAT GGCGGCAGCG CTGAATATTC TCGATCGCGG CGGACGTGTG 
GTAATGATTG AAAAGGAACA TTTGCTGGGT GGCAACTCCA ACAAGGCTAG CTCCGGGATC 
AATGCGTATC GGGACGACAA TGGTGCAGAT GCACTTGAAG TCTTTCGAAA TGATACCATT 
CGATCGGCTG GTTCTTCGGC GCGCTTGGAT TTAGTCGACG TCCTCGTCTC CAAGAGCGCC 
TCGGCTGTGG AATGGTTGCA GTCACGCACT GGAGTCGACC TGTCGCTTGT TGCGCAGTTG 
GGGGGACACT CTGCTAAACG AACGCACAGG CCGAGGAGTG GCATGGTCGG TGCGGAAGTC 
ATTTTTGGCA TGCAGAAAGC CGTCAAACAA TATGAAAAGA CCGGAGAAGT CACGATACTG 
ATCGACAGCA AAGTGACGCG ACTCGTGACA GAAGGTGGAC GTGTGGTGGG AGTTGAATAC 
GCGAGCTCTA AGAAGGACAA CACCACCGAG CCTTACAAAA TTCATGCGGC CAACGTTGTC 
CTGGCGACGG GAGGATTTGC GTCGGATCGA TCGAAAGGCT CATTTTTGGA ACACTACCGT 
CCGGAACTCC TCAAGCTGCC TACAACGGCG GGCGCGTTTT CTACCGGAGA TGGTGTGGCA 
TTGGCAACGG CTCTCGGTGC TGGGATTGTG GATATGGACA AGGTCCAGGT ACATCCGACA 
GGTTGGGTGG ACCCATTAGA CCCAGACAAT CCCAGCAAAA TACTTGCTGC TGAGCTTATG 
CGAGGTGTCG GAGGTTTACT GATCAACGAC GATGGCAATC GCTTTTGTGA CGAGCTCGGG 
ACACGTGCGT ACGTGACGGA TCGAATGCTT TCACACGATG AAGGCTACTC GAGAACTAGG 
CAGTGGAACG TCAATGCGAC AATCCCAATT TTCTCGTTGG TATTGGCTTC ATCGGCTGCT 
GAAGATGGTA TGAAACATGT CGACTTGTAC TCACACAAGG GATTGCTAAA ACGACTGGAA 
GGGTTGTCGG AGCTCGCTGA ATGGATGGAG GTGCCAGTCG ACAAGTTGTC TGAGACCCTG 
CAAAAATATC GCTCTGCTGG TGACGTAGGG GAAGACGAGT TTGGAAAGAA GGAATTCCGT 
GGGACACCCT TGGAAGACTT GCAAAATGAA GTATTTTACG CTGGAAAAGT AACGCCTGTC 
TTGCATTATT GCATGGGTGG CATTACCATA AACGCAAACG GGAAGGTAGT GGCTGAAAAT 
GGCGAAGAAA TTCCAGGACT TTTTGCGGCT GGAGAAGTAA CAGGAGGCGT CCACGGAGTC 
AATCGGCTAG CTGGGAATTC TTTACTGGAA TGCACGGTAT TTGGTACCGT TGTGGGGCAA 
ACGGTCCCGA TCAAGAAAAG TGCTTCCCTG ATGAGCGAGA TTTACAAGAG AGAAGATGAT 
GCACCATCAG CAACGAAGGA CCTTCGGTCG GTTTCGCTAG CTGAGCTCCA GCAACATAGT 
ACTCCCGAAG ATTGCTGGGT TGCCATTGCA GGCGTCGTTT ACGATCTGAC CGAGTTTGCT 
GACGAGCATC CAGCTGGACC CGATTCGATA CACGAATTGG CCGGAAAAGA TGGTACGAAA 
TCTTTCTTAG CAGTCCACAG CCTTGGAATT CTTGACGATT TCGACGAAGA AAGGATAGGA 
AGTTTCAATG AGACATTGAA AGAGGACTTT TTAACCACCA ATAAGTCGGT CGCCGGGACT 
GCCGGAGACA GCAAGAGCGA TACACTTGTG AAACCCTCTG CCGCTTCGCG ATCTGGTGGG 
CTCTGGGACA GCCTTATTGG TCGGTAG 

 

Protein sequence

MIDLQREEEL VHLALSRNLD LLILAKHYGT DVPRFYQLST ALGNGHAVAS ANSEPDAIIV 
GSGLAGMAAA LNILDRGGRV VMIEKEHLLG GNSNKASSGI NAYRDDNGAD ALEVFRNDTI 
RSAGSSARLD LVDVLVSKSA SAVEWLQSRT GVDLSLVAQL GGHSAKRTHR PRSGMVGAEV 
IFGMQKAVKQ YEKTGEVTIL IDSKVTRLVT EGGRVVGVEY ASSKKDNTTE PYKIHAANVV 
LATGGFASDR SKGSFLEHYR PELLKLPTTA GAFSTGDGVA LATALGAGIV DMDKVQVHPT 
GWVDPLDPDN PSKILAAELM RGVGGLLIND DGNRFCDELG TRAYVTDRML SHDEGYSRTR 
QWNVNATIPI FSLVLASSAA EDGMKHVDLY SHKGLLKRLE GLSELAEWME VPVDKLSETL 
QKYRSAGDVG EDEFGKKEFR GTPLEDLQNE VFYAGKVTPV LHYCMGGITI NANGKVVAEN 
GEEIPGLFAA GEVTGGVHGV NRLAGNSLLE CTVFGTVVGQ TVPIKKSASL MSEIYKREDD 
APSATKDLRS VSLAELQQHS TPEDCWVAIA GVVYDLTEFA DEHPAGPDSI HELAGKDGTK 
SFLAVHSLGI LDDFDEERIG SFNETLKEDF LTTNKSVAGT AGDSKSDTLV KPSAASRSGG 
LWDSLIGR