| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50848 |
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| Symbol | |
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| ID | 7199533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | - |
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| Start bp | 1042944 |
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| End bp | 1044719 |
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| Gene Length | 1776 bp |
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| Protein Length | 544 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179112 |
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| Protein GI | 219116634 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.104715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACATCGCT GTGGTTGACA ATGGAGAGAG CAAGGTCCAC TACTGTCAGG CAGCCGCATT
CATTCCGCTC TGCTCTATTG AAATTACAAA TTAATTATCG GTGTTACTTC ACAAACGTTC
TGAAAACGTC ACGCGCTCAA CATGACGTCG CAATCGTCCC ACAAATCGAA TTACGCGCTG
GCCATTTCCT TTCTGGTTCA AGAGCTGATG GATGCGTACG ACAACGGTGA TACCGTCAAT
TTGACGCAAC TCAAAGGCAA GGCCTCGCGC AAGTTCAAGT TGAAGGGAAT TCCCAAAATG
AGTGACATAC TGCAGGGTCT ACCGATCAAT TACCGCAGCA AGCTATGGCC GTACCTGCAG
ACCAAGCCGG TCCGTACGGC CTCTGGCGTT GCGGTCGTCG CCGTTATGAG CAAGCCACAC
CGGTGTCCGC ATATTGCCTA CACTGGAAAC GTTTGCGTTT ACTGCCCCGG TGGACCGGAT
AGTGACTTTG AATATAGCAC GCAGGCGTAC ACTGGATACG AACCAACCTC CATGCGCGCC
ATTCGAGCCC GTTACGACCC CTACAGTCAA GTCAAAGGAC GTGTCGCGCA ACTGCGAGCC
ATTGGACATA CGGTAGACAA GGTAGAATTC ATTGTTATGG GAGGGACCTT TCTGAGTTTG
GATAAGGAGT ACAAAGATTA TTTCATTCGT AACCTACACG ATGCTTTGTC GGGATATCAT
TCGCAAACAG TGGAAGAATC AGTTCGATAC TCAGAGCAAG CTGTTACCAA GTGCATTGGA
ATTACTATTG AAACCAGGCC TGATTACTGC TTAAAGCCAC ACTTGGAAGA GATGCTTTCG
TACGGCTGTA CGCGAATCGA AATCGGTGTA CAAAGTATCT ACGAATCCGT GGCACGAGAA
ACTAATCGCG GACATACGGT GGCGGCTGTT TCTCACTCGT TTCAGCTAGC AAAGGATTGC
GGCTTCAAAG TTGTCACGCA CATGATGCCG GATCTACCAA ATATGGGCTA CGAACGAGAC
TTGGAGGGCT TCAAGGAGTA CTTTGAAAAT CCAATGTTCC GAAGCGACGG TATGAAGCTA
TACCCGACTC TAGTCATCCG AGGAACGGGC TTGTACGAAT TGTGGAAAAC AGGTCGATAC
CAGAATTATA CTCCAGATCA ATTGGTGGAA CTAACCGCGC AAGTTTTGAG CCTCATTCCA
CCGTGGACAC GTTTGTATCG AGTCCAGCGT GATATTCCGA TGCCACTCGT CTCATCTGGT
GTTGAGCACG GCAACCTCCG TGAACTCGCC TTGCAAAAAA TGCGGGAGCA AGATTTGCCG
TGTCTGGATA TTCGATCGCG AGAAGTTGGG ATGAAGCAGA TTCATCACTC CGTCACGCCT
GATCAGGTCG AACTAGTGCG GCGCGACTAC GTTGCCAATG GCGGATGGGA AACTTTTCTT
AGCTACGAAG ATCCGACACA GGACATTCTG ATCGGGCTGC TGCGATTGCG CAAAACATCG
CCTGCTGCAT GGTTGAAGGA AGTTGCCGAA TATCCTTCAA GTATTGTACG AGAATTGCAC
GTATACGGCA CTGCTGTTGC CGTCTCGGCT CGCGACCCGA CTCGTTTTCA GCATCAAGGC
TTTGGTATTC TGCTAATGGA AGAAGCCGAG CATATTGCCC GGGACGAGCA CGGGTCCAAA
AAGTTACTCG TCATTGCGGG GGTCGGAACG CGGCACTATT ACCGCAAGAT GGGGTACCAC
CTGGACGGAC CGTATATGAG CAAAATGTTG CTGTAA
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| Protein sequence | MTSQSSHKSN YALAISFLVQ ELMDAYDNGD TVNLTQLKGK ASRKFKLKGI PKMSDILQGL
PINYRSKLWP YLQTKPVRTA SGVAVVAVMS KPHRCPHIAY TGNVCVYCPG GPDSDFEYST
QAYTGYEPTS MRAIRARYDP YSQVKGRVAQ LRAIGHTVDK VEFIVMGGTF LSLDKEYKDY
FIRNLHDALS GYHSQTVEES VRYSEQAVTK CIGITIETRP DYCLKPHLEE MLSYGCTRIE
IGVQSIYESV ARETNRGHTV AAVSHSFQLA KDCGFKVVTH MMPDLPNMGY ERDLEGFKEY
FENPMFRSDG MKLYPTLVIR GTGLYELWKT GRYQNYTPDQ LVELTAQVLS LIPPWTRLYR
VQRDIPMPLV SSGVEHGNLR ELALQKMREQ DLPCLDIRSR EVGMKQIHHS VTPDQVELVR
RDYVANGGWE TFLSYEDPTQ DILIGLLRLR KTSPAAWLKE VAEYPSSIVR ELHVYGTAVA
VSARDPTRFQ HQGFGILLME EAEHIARDEH GSKKLLVIAG VGTRHYYRKM GYHLDGPYMS
KMLL
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