Gene PHATRDRAFT_45034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45034 
Symbol 
ID7199539 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp1068429 
End bp1070197 
Gene Length1769 bp 
Protein Length510 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178906 
Protein GI219116222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000346108 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCG GCAACCCCGC TTCTGTGAGA TTCCATTCGC CAGCCCTGCG GGATCCAACG 
CCTAGTAGTT TCCACACGAA CTGTAAGTAC CGGTCCATAC CATACTGTTC TGTGTCTAAC
GAACCCGGAC TTAAATACGA CCGTTGGCAG TCCGTACAGC CGGCGATGCG ATGAGCACCA
GCAAGGGTGC GGTAAATGTC CGTGACGCTG GGGGACGATT ACGCCAAAGA CTTTCTTACT
GTTAACAGGA AACAACCAAC GCCTCGAAGG CTTTTGGTTG CTTCCAACAA TCGATCGAAG
AACAAAGTTA CCCTTCCACA CTCTCTCTCA CGAGCACTCT CTCTCGTCCT CAATCAAAGG
GCTCCCATAG TATGGTGCGA ACGAGACCTC TTGTATCGTT GTCGTTGTCG TTGTTACCGA
CGCTAGTAAG GCTCGGAACG ACGAGCGTGA CCGCCGACGC TTCCGCAGAC TGCACCGTGC
AGCTCGACGG CACGTGTGTG TCTTCGCTGC CACGACTCGA ATGCGGTGTG TACATGGCGC
CGAGTACTTT GGGTGAAGAC ACGAACCTGG GAATCTACAC GGGCAAGGCA CTCCGGACGG
ACGACGTTGT CAACTTTCCA GAAATCGCCA TTCCGCTGCT CTTCCGCGAA TGGGGCGAGC
ACGTCGAAGG GATTGCCGAC GGTGCACTCT GGGATCGCTA TATTTGGGAA GGCGAAGTCG
CCGATTTGGA AACCTACACC GATCGCAACC GCATCGACAA CCGCGCCGTC TTTGTGCCGG
GCGTTGGCTG CACCGTCAAC TCGGTACTCG ACATGAACAA CATTGAGAGC ACGCACGGAT
CCACCTACGA TACCGCTGGC TTGCACCGAT CGCGGGATCC CGGTACCGGT GCTTTTTCGC
CCTACCACAG CGCGCTTACT ACCGCCGTCA CCGATATTGC CCCCGGCGCC GAGCTGTTCG
CCTCCTACGG GGACTACTGG GTACCGTCCA TTCCGGGAGT GCAAGTCACA CTCGATGAAG
TCCTCGATGT GACCGAAGAC TTCTTGCAGA ACGATTTGTA CGAATTTGTG CAGTCGCACC
GTGACGCCGA TGCGCTCACT CCCGACGTCA AGGAAGCGCT CTTTGCTTTT GTCAAGGACT
TTCCCCTGCC CAATCAGCCT TTTTCTAATC TGCCCCGCAA CGTTCCCTGG GCCGACGTCG
AACGGGCTAT CCACGAAGCC GGCACACACC GCAAACACAC TGATACGACA ACTGACAATG
TTAGCGGCGA GTCCTCCGTT GCACGACAGT TCATTCGGGA ACAGTCGATC CGTGATCTAG
CCTGGTTAGA CGAACACGGC TACTGTCAGG ATCACCTGCG ACCAGGTCGC TCCACACTAC
CCCAAGCCGG ACGCGGGGCT TTTGCTACCC GTAATCTCCC GGCCGGAAGC GTAGTCGGCT
ACGCCCCGCT CATTCATATT GGACTACACG GGCGTGAAGT TTTACGTATC ACTTATCCTC
CCAGCGAACA CGATCATCAC GTTGGGAACG ATGACAACGA CGGTGAGAAC GGCACGACAC
CGCGCACCAG TTACGATCTT GTCCTCAACT ACAGCTTTGC CCATCGCAAT TCAACCGTCA
TACTTACACC CTACGGCGGA ATGGTAAACT ATATCAATCA CGGTAGTACA ACTAGCGGGC
GTGCCAACGT ACAGGTGCGG TGGCCGGACA AATCCTTGAT CGCTCACGTC CCATCCTGGC
TGGAACAAGA CCCCATATTC TTGTCGGAA
 
Protein sequence
MRTGNPASVR FHSPALRDPT PSSFHTNFRT AGDAMSTSKG AVNETTNASK AFGCFQQSIE 
EQSYPSTLSL TSTLSRPQSK GSHSMVRTRP LVSLSLSLLP TLVRLGTTSV TADASADCTV
QLDGTCVSSL PRLECGVYMA PSTLGEDTNL GIYTGKALRT DDVVNFPEIA IPLLFREWGE
HVEGIADGAL WDRYIWEGEV ADLETYTDRN RIDNRAVFVP GVGCTVNSVL DMNNIESTHG
STYDTAGLHR SRDPGTGAFS PYHSALTTAV TDIAPGAELF ASYGDYWVPS IPGVQVTLDE
VLDVTEDFLQ NDLYEFVQSH RDADALTPDV KEALFAFVKD FPLPNQPFSN LPRNVPWADV
ERAIHEAGTH RKHTDTTTDN VSGESSVARQ FIREQSIRDL AWLDEHGYCQ DHLRPGRSTL
PQAGRGAFAT RNLPAGSVVG YAPLIHIGLH GREVLRITYP PSEHDHHVGN DDNDGENGTT
PRTSYDLVLN YSFAHRNSTV ILTPYGGMYN