| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45017 |
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| Symbol | |
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| ID | 7199682 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | + |
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| Start bp | 1009622 |
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| End bp | 1012281 |
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| Gene Length | 2660 bp |
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| Protein Length | 811 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178894 |
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| Protein GI | 219116198 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0053865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCCGATACGG CACGGTATGC CCCATTGAAA GCGTTCCGAG TGTGTGCGAA CCCCCCTTTC
TTCCTTCCCC AGCCCCTCAT TGTTGCTTAC TATAAGCTTC CTTGCATCCG GTACTGGTGC
CATTGATTCA CATGTTTCGT TCGTCGACAG TCCTTCTCGC AACTCGGTCG TCGGCGTTGG
CGCGGCATTC CGCGACAGCG GTCGCTCCGA CTCGGCGGCG GTGCGCCTTT GTTCTGGGAC
ATTCGGATCC CCCGACGCGT CTCGCGGGAC AGCCGCGTTT CTTGTCTTCG ATTGATTCAC
CTTTACCACC GACCAGTAAT CACCGGCACC AACCGTTGGA ACATGCACGG GGATCCATTC
TTTACACGGA AACGGACGAA GCCCCCGCCC TCGCAACCTT TTCGCTCTAC CCAGTCATAT
CAAAGGTACC GTAACGGCAT TGCCGATCCA GTCCTTCTCC ACGCCTTGCT TCCAGATCTC
TCACTCTCTT TGATTTCGCT CCGTTCTGGT CCAGTTCTCT GCTCTCGCTA ATGTGGATAT
CGTGCCTTGC GATATTTCCG TGGCGGGCCG CGTCTTGGCG GCGTTTCCGG AATGCCTCAA
GCCATCGCAG CGGGTCCCCG ACAATCTCTC CTACCTTGGC AAAAAGGCTC TCGAAGCAGA
CTGCGCTATC GTCAAATTGC CCAACATTTC TGCACCTCTC AACCAACTGC TGGAATGCGT
TAACGAACTC CGCCACAAGG GATACGACGT TCCCCTCTAT CCGCACGAAC CAAGCAACGT
CGAAGAAACG GACGTGAAAC ACCGTTACGA TAAACTCATG GGTTCCGCGG TCAATCCCGT
ATTACGGGAG GGGAATTCTG ATCGTCGCGT TGCGGCACCC GTCAAGGCCT ACGCCCAAAA
GAACCCGCAC CGCATGGGCT TGTGGAGCAA GGCATCCCGC ACCCACGTGG CACACATGGA
AACGGGAGAC TTTTACGAAA CGGAACAGTC CGCCGTCATG GCGCTCCCTA CCTCAGTCTC
CATTGTGCTG GCTACCAAGA ACGAAGGCGA AATCGTCCTC AAGGCGGAAA CGCCACTCGA
AGAGGGGGAA GTCGTTGATG CGTCGCGAAT GAGCGTCAAG TCCTTGCGAG ACTTTTACGA
ACGTGAAATG CAGGACGCTA AGGACTCCGA ACTCATGCTC TCTCTACATC TCAAGGCCAC
CATGATGAAA GTCTCGGATC CAATCATGTT CGGACACGCA ATTCGTGTCT TTTTCCAAGA
CGCCTTTGAC AAGCACGGGG AGGTCTTGGC TTCGATTGGG GCCAATCCCA ACGGAGGTCT
CGGTAGCGTC TACGAAACAA TCAAATCCAA ACTGCCCGCG GATCAGGCTG CTACTATTCA
AGCCGACTTT GAAGCCTGTT TTGAGGATCG CCCCTGGCTA GCAATGGTTG ATTCCGATAA
GGGTATTACC AACCTACACG CACCCAACGA TATTATCATT GATGCCAGTA TGCCTGTCGT
GGTACGTGAT TCGGGTAAAA TGTGGAACAA ATTGGGCGAG TTGGAAGACG TCAAGTGCCT
CATTCCGGAT CGATGCTACG CCACCATGTA TCAAGAAGTG CTTTCCTACG TCAAGACCAA
GGGACAGTTT GATGTGGCCA CCATGGGATC GGTTGCCAAC GTGGGGCTCA TGGCCAAAAA
AGCGGAAGAG TATGGATCGC ACGACAAAAC ATTCGAAATC CCGAGTGATG GTCGCGTTGT
GGTGAAAGAT AATAACACAG GCGAAGTGTA CTTTGAACAT GTGGTGAATG CCGGCGATGT
GTGGCGTATG TGCCAAACGA AGGACGTGGC CATTCGCGAC TGGGTCCGTC TCGCTGTGGA
ACGTGCCCGC GCCACCGGCG ATCGTACCAT CTTTTGGCTC GACAAGCGTC GTGCCCACGA
TGCCTCGCTT ATAAAAAAAG TCAATACTTA TTTGAAAGAT CACGATACGG ATGGTTTGGA
TATTTCCATT ATGCGTCCGG TAGATGCCGT GCGTATTTCT ATGGAACGAG CTACGGACGG
CAAGAATACT ATTTCAGTTA CTGGAAATGT GCTGCGTGAT TATTTGACGG ATTTGTTTCC
TATTCTAGAA CTCGGGACGT CCGCTAAGAT GCTTTCCATT GTTCCTCTTT TGGCGGGTGG
CGGCTTGTAC GAGACGGGAG CCGGTGGTTC GGCCCCCAAG CACGTGCAGC AATTTGTGAA
GGAAGGCCAT TTACGGTGGG ATAGTCTCGG AGAATACTTG GCTTTGGCGG TTGCGTTGGA
GGGGTTAGCC GACACCGCGG GCAACCCGAA AGCCAAGATT CTTGGTGACT GCCTTAACAA
GGCTGTGGGC CGGATTTTGA CGAATCGGAA GAGTCCATCC CGTGTGGTGA ACCAAATCGA
CAACCGTGCA ACCAACTTTT ACGTGAGCTT GTACTGGGCC GACTTTTTGC AACAGGAAGA
TCCATCGTAC AAGGCGATTT TTGAATCACT TACGGAGAAT CGCGGTAAGA TTGTTGAAGA
GTTCTCGCAA TGCCAGGGGA CCGCCGTGGA TCTAGGTGGA TATTATTTGT TCGACCCGGC
CAAGACCAAG GCCGCCATGA ACCCCTCGCC CACACTCAAC AAGATCCTGA GTAGCTTTGG
TCCCGACATG AACTAAAGAT
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| Protein sequence | MFRSSTVLLA TRSSALARHS ATAVAPTRRR CAFVLGHSDP PTRLAGQPRF LSSIDSPLPP
TSNHRHQPLE HARGSILYTE TDEAPALATF SLYPVISKFS ALANVDIVPC DISVAGRVLA
AFPECLKPSQ RVPDNLSYLG KKALEADCAI VKLPNISAPL NQLLECVNEL RHKGYDVPLY
PHEPSNVEET DVKHRYDKLM GSAVNPVLRE GNSDRRVAAP VKAYAQKNPH RMGLWSKASR
THVAHMETGD FYETEQSAVM ALPTSVSIVL ATKNEGEIVL KAETPLEEGE VVDASRMSVK
SLRDFYEREM QDAKDSELML SLHLKATMMK VSDPIMFGHA IRVFFQDAFD KHGEVLASIG
ANPNGGLGSV YETIKSKLPA DQAATIQADF EACFEDRPWL AMVDSDKGIT NLHAPNDIII
DASMPVVVRD SGKMWNKLGE LEDVKCLIPD RCYATMYQEV LSYVKTKGQF DVATMGSVAN
VGLMAKKAEE YGSHDKTFEI PSDGRVVVKD NNTGEVYFEH VVNAGDVWRM CQTKDVAIRD
WVRLAVERAR ATGDRTIFWL DKRRAHDASL IKKVNTYLKD HDTDGLDISI MRPVDAVRIS
MERATDGKNT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLLAGGGLY ETGAGGSAPK
HVQQFVKEGH LRWDSLGEYL ALAVALEGLA DTAGNPKAKI LGDCLNKAVG RILTNRKSPS
RVVNQIDNRA TNFYVSLYWA DFLQQEDPSY KAIFESLTEN RGKIVEEFSQ CQGTAVDLGG
YYLFDPAKTK AAMNPSPTLN KILSSFGPDM N
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