| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45009 |
|---|
| Symbol | |
|---|
| ID | 7199678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 985711 |
|---|
| End bp | 987359 |
|---|
| Gene Length | 1649 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179103 |
|---|
| Protein GI | 219116616 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGATACGGTT GCAATTGATA ACGGTTGCAA TTGATACGAT TCCGGTGTGT CTTTATTGTG
TATTTCAGAC CCACATATCC TCTCCTTTCC CCACACTGCA CAAAGCACTC GAACAGAAAG
AATTTCCAAA AAACAACCAC CACAAAATCC CAATGCAGAC AACGGCGCGC CATACGTTGG
TGACACTCGT GGAGGATCAC CTGACCGTGT TGATTGCTGA TGCCGTCACG GTGGGACGAC
ACGCCAAGCG TGCCCGAACC GTCACCAACA GTAACTCCAA CAATAACACC ACGAACGGGA
CACCCTTGGA CGAAGTCGCT GCCGTGTCCA AAGGAACATC TTCCAGTACG GGGGGAGGAG
TCACGGTACG CCGACGTTTA CACGCGGCCG ACATTAATCT CGCCTTGCAA ATGCGACAGT
CGGAAAAACT TTACGCGACG GCTCTCGTGC CACCGGACAC GGTACATCCG TCGTCTATGT
CGACAACAAC CACCACGGAC AATCCCGACC ATTCCTTACC CGCGTCGCAT CGTCCCGTCA
ATCTGGCCGA CTTTTTGCGA CACGCCCAAC TCCCATTCCA ACAACCCGCC GAAGTCGCCT
TGCACGTGTC GTGGCTTGCC GTGGACGGCA TTGCTCCGGA ACCGCATCCG CACGGGGTTG
TCGGGGCGTG GACGGACCGA CACACGCCCT CACCCCATCC CCTCGCCATG CCACACGAAA
ACAACAATCA CCACAACCCA TACCAATCCA CCGCTCCCCA AGCCTGGCTC GTACAACAAC
TCCAAGCCGC CATGTTGTCC GAAGAACTAC AACTATACTT TACCCGCGTC ACCTACGCTC
TGGATAACAC CACCAATACC CACTCCCCGA CCTCCGCACG CGCGCAAGAT CGACTCCTGG
ATCGACTCGC CGTCGACGCG CATTTGCAGG AACTCGTGCC CTTTTTCGCA CGCTACGTCA
CGCAGACTCT CTACGCATCG CACGTGACCC ACCAACGTGC CGCCGTACGA CTCGTGCAAG
CCATGCTCCA CAATCCAACC CTGCATCTCG AACTCTACTT GCACGAACTC GTACCAGCAC
TCTTGACCGC CATTGTGGCC GATCACCGCG ACCGGACGAA CCAACGGACC TCCGTCGCCG
TGACCGCCAC GCCGCACTGG CGTTTGCGCG TCGAAGCTTC CGTCGCGCTC CGCACCGTCT
GTCGACAATT CGGACCCGAA TACCCCACCC TCCAAGCACG GGTACTCCGG ACCCTCTGTC
AAGCACTCGG ACCGGACCGG TCCCGACCGG CCGTCTTTGG CGGTCTCACC GCCGTCACAC
TCTTTGGACC ACTCGCCATC CAAGCCTTTG TCCTACCCAT GCTGCCGCAC GCCTGGAATG
CCTGGGAGGA GGAAGCACAG TCGTCCGCTA CGGAAGAAGT GCAGTGGGAG ACCCGACAAT
GCCAACAAGC CGCACTCGGT GCCCTCGGGA CGTGGTTGCG GTCCTACGCA CCAACGGCTC
CGCAGACGTT AACTGCTGGA CCGGCAGAAC AAGTTGCCGC GACCGACGTC GCGCATCCAC
TCCTCGCCGA CACGTGGGGA GATGCCCTGG TACCCTTGCA AGGCTACGGA CCCGACGTGC
CCACCGATTA TACCCTGTGT GTACTCTAA
|
|---|
| Protein sequence | MQTTARHTLV TLVEDHLTVL IADAVTVGRH AKRARTVTNS NSNNNTTNGT PLDEVAAVSK
GTSSSTGGGV TVRRRLHAAD INLALQMRQS EKLYATALVP PDTVHPSSMS TTTTTDNPDH
SLPASHRPVN LADFLRHAQL PFQQPAEVAL HVSWLAVDGI APEPHPHGVV GAWTDRHTPS
PHPLAMPHEN NNHHNPYQST APQAWLVQQL QAAMLSEELQ LYFTRVTYAL DNTTNTHSPT
SARAQDRLLD RLAVDAHLQE LVPFFARYVT QTLYASHVTH QRAAVRLVQA MLHNPTLHLE
LYLHELVPAL LTAIVADHRD RTNQRTSVAV TATPHWRLRV EASVALRTVC RQFGPEYPTL
QARVLRTLCQ ALGPDRSRPA VFGGLTAVTL FGPLAIQAFV LPMLPHAWNA WEEEAQSSAT
EEVQWETRQC QQAALGALGT WLRSYAPTAP QTLTAGPAEQ VAATDVAHPL LADTWGDALV
PLQGYGPDVP TDYTLCVL
|
|---|
| |