Gene PHATRDRAFT_44991 details

Gene Information

• Locus tag: PHATRDRAFT_44991
• ID: 7199664
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 914982
• End bp: 917208
• Gene Length: 2227 bp
• Protein Length: 587 aa
• GC content: 45%
• Product: predicted protein
• Protein accession: XP_002178876
• Protein GI: 219116162

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGACCTCCTA AATTGCTTAC AGGAGATGAT TACTGCCACC GTTACACCAT ATATAATACA 
CTTGAATCGT CCAGCCAAAA AACATAGCGA AGGGCACTCC ACCACGTGAT TGCGTGTAGA 
AGAAAATAAT CTGAATGCAG TTTCGAGAAG TCGGAGTAAG CAATAATGAC ATCCTGGATT 
GCCATAGAAA CGGGTATATA TCCTTTGGTG CAAAGAGCAT CTCGCACTAG CTCTGTAGAT 
GCTCACAAAT ATTTCATTGA GAACACTTCT CACAAAATTT ACGCATAGCC GAAGAAAAAT 
ATGATATTTC GCATCACCTT CCTGTTGTTC TTCGCCCTCT CCTTGAACAC TGCTAGTGCA 
GCATCGAAGG CCGAGCAAAA GCAAAAATCG TTCTCGGTTT TGGACTTCCT TCAAGATCCT 
GTTGCCCAGG AAACCGCCCG TTTTGATGCC TCTCAGCACC AACGCCAGCG TCGAGAGCTA 
CAAGAGTCTC CAGCTTGTGG CGACCAGATA ACTACCATTA CAGCGGGTGA GATTAAGCAA 
ATTGCCGCTC TGCTACTGGG AAACGTATTG GCAGGCGATT TGGCGGCTTT CGGTGAAGTG 
GCTTTAGCGG CAATAGATCA GGTAATTGTA TATGATTTAC AAGCCGTCAA GATCTGCAGT 
TCCTGCATCG AAACCAACAT ACTGACCGCG GTTGAACCTT GGAGGAGTGC GGAAGGATTC 
GGCTCTTACA ATACATACTG CAACGAAGGT ATTTTTGGTT TTGATGCCCA ACACAGCAGT 
GTCATGTTCC TACCGCTTGA CAGAGAGACT GGTTTGCCTG TTAGTGGAAA CCTCCGTGGT 
GTGATGGCTA TGCACGGACT CTTGTTGGAA AACAGAGATG CTCCCAGCGA GATATTGCCT 
GCCAATTTGA CAGAGTCTCT GGTAGCAACT GGTCCCGAAG CATTCTTTTT TATGATTATT 
GCTTTCTTGG AAAGCCTGGT GGCATCGTCT GCGGGAGCAG TTTCTCTGAT GCCAGACTTT 
CTAGGCTCAG GCGAGTCAGC TCTCACCCAC AATCGAGTAA GTTGGTGAGA CAGTGACCTC 
TCTCTCTGTT GTAATCATCT TCTGAAAAAC TGACTGCCTC TTTTAGACCA TTTCTGTGCC 
ACAATTTTAC ATGCAGTCGG CTGCACAGGC ATATTTTGGA GCACAGAGCT ACTTGGACAA 
GCATACAAAC GGATGTACAA AAATGTACAA TGAATGGAAT GTTGTAGGAT CCTCCGATGG 
CGGCTTTGGA TCTATTCCTG CTGCTAAAGC TCTTCAAGCA TTGGACAACC GTATCCTGAA 
TGTATTTGCT GGTGCACCAT ATCTGGATGC CAATGTACAA CTCAGATTTA TTTTTGGTAA 
GTAGAAGAAT AGGGTCACAA TTAGCAGTGC TTTCTGAAGC TTTTTTAAAG TGCCACTCAC 
AAAACCAATT CCTTGTTTCT CAATTCTAGA CACATATCTT AGTGGCTTCT TCAGTCCGGA 
CAAGGATAAC TCCTTCTTGC AGCTGTTTAT TCCACTACTT GGTTTTACGG GCTCAATTGA 
AAGTCCTGGA TACCCAAACA CTGGGACGGG GCAGAAGTTT GTTGATGCTT CTCAGCTTGC 
TGCAGTTACC AAGTGGATGG CAAATCCTTC TCCTCTTGGA CCAACTGAAC TTGCAACTAT 
TGTACCATTC CCGGCACTGG ATATCTTGAA CAAAGACTTA GTCGAAATGT ACCAGACAGC 
AATTGTGACA AACGTGACCA ATCCTTGTTT GGAAGGCTTG TTTTCCAACA AAACTGATAA 
ATTGTGTGAT GTCATCAATG AAGGGAGCCT TTTTAGCATT CTCCAAAGCT TTGACATTCA 
AACTCAGCTT TGCTACAGCC AAGAGGACAC GCTGAATACC CGTGACAACT TCATCCCCGA 
GCTTTTTGAG AACTCGCTTG TTTCCGAAGT AACTTCACTT TTGCATGGAA TATTGCCTAT 
TACAGGGGAT CACTTAAAAG CCACCTTCCT TTGCAAAATC AACCCCATCA GCTTCTTTGC 
TATGAATGGT CCGGCAACAA CCAATCCTCC AGTTTTGACA ACTACCATTG ACGGTGACGA 
ATTGGCAAAC TACTTAAAAG CATCCGGTCC TCGCACCATC TCCACAATTA CCAGTTCCGG 
CGGTGTGAAG ATGGGATTTT CCATTTTGTC TACTGTGCTA CTTCTGGCCT ACTTCCCTTT 
TGTTTGA 

 

Protein sequence

MIFRITFLLF FALSLNTASA ASKAEQKQKS FSVLDFLQDP VAQETARFDA SQHQRQRREL 
QESPACGDQI TTITAGEIKQ IAALLLGNVL AGDLAAFGEV ALAAIDQVIV YDLQAVKICS 
SCIETNILTA VEPWRSAEGF GSYNTYCNEG IFGFDAQHSS VMFLPLDRET GLPVSGNLRG 
VMAMHGLLLE NRDAPSEILP ANLTESLVAT GPEAFFFMII AFLESLVASS AGAVSLMPDF 
LGSGESALTH NRTISVPQFY MQSAAQAYFG AQSYLDKHTN GCTKMYNEWN VVGSSDGGFG 
SIPAAKALQA LDNRILNVFA GAPYLDANVQ LRFIFDTYLS GFFSPDKDNS FLQLFIPLLG 
FTGSIESPGY PNTGTGQKFV DASQLAAVTK WMANPSPLGP TELATIVPFP ALDILNKDLV 
EMYQTAIVTN VTNPCLEGLF SNKTDKLCDV INEGSLFSIL QSFDIQTQLC YSQEDTLNTR 
DNFIPELFEN SLVSEVTSLL HGILPITGDH LKATFLCKIN PISFFAMNGP ATTNPPVLTT 
TIDGDELANY LKASGPRTIS TITSSGGVKM GFSILSTVLL LAYFPFV