Gene PHATRDRAFT_44969 details

Gene Information

• Locus tag: PHATRDRAFT_44969
• ID: 7199646
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 841999
• End bp: 844170
• Gene Length: 2172 bp
• Protein Length: 561 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002179074
• Protein GI: 219116558

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAGCCATCC ATCAAATGGA GTAAAGTACG TCAACGACTC CTTTGACAGT CCGTGAGAAT 
CTCATTGTGA ACTTTCTCGG CCCATACAAT GATCCTCTCG CATTTACAGT GACAGTGAAA 
AAGACGTGTT ACCTCTACAT TGGATGGATA GTTTGATGGT TGTCTGTCTT TTATCGAGTG 
CGGACGGATT AAAGACCACA AAATCACGTG GCAGGCTTAG GCTTCGGAAT GGTATGAGAC 
CTCATTTCAT TCTTGAATGT GCTTTGGCTG CAAAAATTGT TGACGAGCCT TCTGCCTTTC 
CCGGTTGACC TGTAAGCGTG AAACTGTCCA CAGATTGATT GTTTATTGTT CCACTGGCTG 
ATATGCTGTT TGCTTGTTTG TTTGTTTTTT TGCAAAAGTG GTGCACATCT GACTATGAAG 
AAACAAATCG GTGTTCTGTT CGTTTTATTG CACCTGTGTA ACGCGTCGTC TAGATCCGTA 
GTTGCGGCTG CAAATGTTCG TACAAACCAG AAGTGCTCGA CAAAGACTCG TGAACCACCT 
TTCGGTAAAT GGATTGAGGA GGCGCGGCTC TTGGGATGTT GCTCGCCACT GATTTCTGCA 
TCAATGTTTG GTGCGGCAAG TGCAGTACTA CTTGCTGGAA CCGCAATGGA GCCAGTCTCA 
AGAGCTCTTT ACTTTTGGAG GACAGCCGGG CCCGCAATTT TCCATTATAA ATTTACGCAG 
TGGTGGTTGG AGGCATCCAA GGCTGACATA GAAAAGCGCG ATCTAGTTTA CGAAAGCTTG 
CACGATCGAT ATGCTGAACC CGCCTTGAAG ATGATGATTC GCCAAAAAGG TCTGTACGTG 
AAACTCGGAC AGGTTCTTTC CTCGCGACCA GACTTTTTAC CATCCCAGTA CATCGAACGT 
TTCGCAACTG TTCAAGATTC GATACCGCAA TGGCCTATCG ACCAGGTACG CGCGATAGTG 
GAGAAGTCCT TGATAGTCGA ACTCGGCCTG TCTTGGGGGG ACGTCTTCGA ATCCATGGAT 
GATATAGCAC TTGGGTCGGC AAGCATTGGG CAAGTCCACA GAGCCGTGTT GACCGAGAAG 
TGGGCCAAAA CTACAGGATA CAGAGGAGAT AAAGAAGCGG CTGTGAAAGT CATGCATCCC 
AACTCCCAAA AGCTATTTGC ATATGATTTT GATGTGTTTC GATGGGTTTG CCGTATTGCA 
TTACCCGGTT GGAAAGGTTT CTTGGACGAG CTCGAGCGAA GAATCATGAG CGAGTTCGAC 
TATCGGCACG AAGCCACTTC GTTGGATGAA GTTCGTTCTC CGTACAAATC TAGAGTTTAT 
ATACCGCAAC CTTTACAGGA GCTCTGTTGC CGTCATGTGC TTGTAATGGA GCTTCTAAAA 
GGGCGGAAAT TAGTGGACTC CTTTGAGGAC GGCCTGGCGA ATGCGATGGG AGGGCATGAT 
CTTGCCAAAG CATATTTGGC GAAGAAACAA AGAGAAATAT TGCTAGGTTC TTGCGATGGT 
ACAGATTATG ACGCCATCTG GCGGCTACCC ATAGTCAACA AACTCAAACT TTTGTGGCTG 
AGAAGAGTGG CATCCAAATA CATCGATCTT TTGCTAGACG TCCACGGGTA CCAAATCTTT 
CAGAACGGAT GCTTTAACGG AGATCCTCAT CCTGGAAACT GTTTGCAACT AGAGGATGGA 
CGTCTTGGCT TGATTGACTT CGGTCAAACC CGCCGTCTTA CAGAGACAGA AAGATACGAT 
TTGGCCCGAA TTGTATGTGC TTTAAATGAT CCTTCCACGG ATGCTATCGG AATTGATTAC 
GCAATGCAAA CGGCTGGCTT TCAACTCAGA GACGCAAGTG CGGAGATGAT GGTCAAATAT 
GCTACGATTT TCTTTGACTC TGACGAGGAT AGCAAACACC TGGGCTTCGC AACACCACAA 
CTTTATTTTG CTAGTTTAAT GGCAACCAAT CCTTTGGTTG TCATTCCAGA TTCAGCTGGT 
ACGTAGTTTG ATTGAAACTT GAGCTATGAA TTGTCGAATT GATTGCATCT GAAATTGCTT 
CTTTGTACAG TGTTTGTCGC TAGGACGAGC TTCTTGTTCC GTGGCATCGG TAGTGGTGTC 
GGCTCCGGCC CACTGAGAAC TTCACAAAGG TGGCAAGAGC ATGCTGCTGC TGCAATTAGC 
CAGGTCTCAT AG 

 

Protein sequence

MKKQIGVLFV LLHLCNASSR SVVAAANVRT NQKCSTKTRE PPFGKWIEEA RLLGCCSPLI 
SASMFGAASA VLLAGTAMEP VSRALYFWRT AGPAIFHYKF TQWWLEASKA DIEKRDLVYE 
SLHDRYAEPA LKMMIRQKGL YVKLGQVLSS RPDFLPSQYI ERFATVQDSI PQWPIDQVRA 
IVEKSLIVEL GLSWGDVFES MDDIALGSAS IGQVHRAVLT EKWAKTTGYR GDKEAAVKVM 
HPNSQKLFAY DFDVFRWVCR IALPGWKGFL DELERRIMSE FDYRHEATSL DEVRSPYKSR 
VYIPQPLQEL CCRHVLVMEL LKGRKLVDSF EDGLANAMGG HDLAKAYLAK KQREILLGSC 
DGTDYDAIWR LPIVNKLKLL WLRRVASKYI DLLLDVHGYQ IFQNGCFNGD PHPGNCLQLE 
DGRLGLIDFG QTRRLTETER YDLARIVCAL NDPSTDAIGI DYAMQTAGFQ LRDASAEMMV 
KYATIFFDSD EDSKHLGFAT PQLYFASLMA TNPLVVIPDS AVFVARTSFL FRGIGSGVGS 
GPLRTSQRWQ EHAAAAISQV S