Gene PHATRDRAFT_44961 details

Gene Information

• Locus tag: PHATRDRAFT_44961
• ID: 7199488
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 802536
• End bp: 804620
• Gene Length: 2085 bp
• Protein Length: 682 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002179067
• Protein GI: 219116544

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.114443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAACG ATGACAGCGA TAAGCTAATT CATCCCATGA CGGCGGTTCC CGACGCCATC 
CGCATCGTAC TGACCGAGTG CGCCCGCGTG CTCCTGCAAA AATCGGATTT TGCTCCACCA 
GTTTTGTCGA TTGATGCCCA TGTCGATGGT GGGTCCTTGC TAGGTCAGGT ACTTGCCGAG 
CCAGTTGGCA TGTCTGAACC AGGGTATCCG CCCTACCGAG CAAGCATTAT GGACGGATTT 
GCCATTCGAA CGACCGATCG GTTTCCATCG ACTTTTCCAA ATGGATCTTC CCCGCCGACA 
ACGAAGCAAT GGACCCATAC AATTGCTGGA AAAGTGTTCG CTGGTAATAC TTCCCAAACA 
AAAGATGACA CCGGTACCTC ACAGACAGTG GACGCGTGTC AGTTACCCAC AGCATACTAC 
CTCACCACAG GAGCCGTCGT TCCTAATGAC TTTGACTGCG TGGTTCCTGT CGAAAAATGC 
ACCGTCAACA ACAAGACAAA TCCGACTTTT GTGAATATAC AGGCAGTTCC GGCCGACATC 
CAATCAGGTA AATGGATCCG CGATGTAGGT TGCGATATAC CAGCCGGTAT GGAAATGTTG 
CCACGGGGTC ACGTTCTGGA TGCCGTCTCC CTGGGTTTGA TACGGCAATC TGGTTGTGAG 
CGCGTAAGTA TTCGGCGTCG ACCAGTCGTG GGCGTCCTTT CTACGGGCAA TGAGCTACTA 
GGTGACAATG TACGCGGGGA ACAATCTCGG CACGGTATGA TTCCGGATGT GAATCGACCC 
GTTCTGCTTG CCACGTTGAA ATCTATGGCA AACTGTACGA CTGTGGATTT GGGGTTGGCT 
CGAGACGATA GCGTCGACGA TATGGCATCC CACCTTCAGT CTGCATTGGA GCGCTGTGAT 
GTAGTGATTA CAACTGGCGG AATTTCCATG GGAGAAACGG ACATTATTGA AGAAGTACTA 
GTGGAACGAC TCCAGGGTAA AGTACACTTT GGTCGACTCC TCATGAAACC TGGTAAGCCC 
ACAACCTTTG CTACGGTTGT GACTGCACCG TCCTCTGGGA CCAAGCTAAT CTTCGCCATG 
CCAGGAAATC CTGTGAGTGC AGTCGTCTGT ACACACTTGC TGGTACAGCC GTGCCTCGAC 
TTGCTCCATC ACGGACCGGA TAGTACAGCC GATACTTACG GAGAGAGTGT GGAAGAACAA 
ATACACCGCG TTGTGTTGAA TGCCGCAGTC CATCCAGAAG TTCAGGCAAT TCTCAGTCAG 
GACATCAGAC TGGATCATGA ACGACCCGAA TATCATCGCG TTCAACTGCG AGAACAAATG 
CCGGGAGGAA GCGTTTTCGC GTTTAGCACG GGGGTCCAAC AGTCTTCCCG ACTCATGAGT 
ATGCTTGGCG CCGATGCCCT TCTCATTTTA CCGCAAGGAA CGACGTCCAA ATCAACTGCC 
AAAAAAGGTG AAACGTACAC GGCACTCCTA CTTCGTCATC GCAGTCGCTA CCCACAAAAA 
CTCGTGACCG AGGCTCAGCA CTTGAATCCA ATCTCTTCAA CGGGAAACAA TATCCGGATC 
GGCGTTGTCT TTGCCGCCCC AAGTGTGCAG TTGTTACTCA CCCCTACGCT AGAAGAGATC 
ACCGAGTCGG TCCAAGCTGC AATGGCTGGA TCCAAAAAGA GCCACAGCAT AGAAATATCC 
TCCACACAAC TGTACACAGG CAGCGCAACC AAAATTGAGA ATTTTCTTAA CTCCATACCG 
CTGGATGTCG ATATTCTCAT CATTACTTAT TCAAAACGAC AATTTCGGTA TCAGCTGGCC 
TTGGCCAATT CGCTGCGCCA TGCGCTGATC AAACGTGCCG ACTGGATAGC GTTGCAGGCT 
CGTCAAGGTT GTGCCGCATA CGATCCTACC ACTGCCGCTT CTGAAATGGT GGTCGGTTTT 
TGGGAACGAA CGAAAGAAAC CTCCTTATCC GATGCGATAG TGGTATGTTT GCCGGCCGAA 
GGGGTCGGAG GATTGTCCCA TGTGCGGGGG GTTCTGCGAC ATGCGCTCCG CGTGGCACGC 
GGGGCCGGTC ACTCTGATGA AGGCTATCCT CGGAAGGAAA GCTAG 

 

Protein sequence

MTNDDSDKLI HPMTAVPDAI RIVLTECARV LLQKSDFAPP VLSIDAHVDG GSLLGQVLAE 
PVGMSEPGYP PYRASIMDGF AIRTTDRFPS TFPNGSSPPT TKQWTHTIAG KVFAGNTSQT 
KDDTGTSQTV DACQLPTAYY LTTGAVVPND FDCVVPVEKC TVNNKTNPTF VNIQAVPADI 
QSGKWIRDVG CDIPAGMEML PRGHVLDAVS LGLIRQSGCE RVSIRRRPVV GVLSTGNELL 
GDNVRGEQSR HGMIPDVNRP VLLATLKSMA NCTTVDLGLA RDDSVDDMAS HLQSALERCD 
VVITTGGISM GETDIIEEVL VERLQGKVHF GRLLMKPGKP TTFATVVTAP SSGTKLIFAM 
PGNPPCLDLL HHGPDSTADT YGESVEEQIH RVVLNAAVHP EVQAILSQDI RLDHERPEYH 
RVQLREQMPG GSVFAFSTGV QQSSRLMSML GADALLILPQ GTTSKSTAKK GETYTALLLR 
HRSRYPQKLV TEAQHLNPIS STGNNIRIGV VFAAPSVQLL LTPTLEEITE SVQAAMAGSK 
KSHSIEISST QLYTGSATKI ENFLNSIPLD VDILIITYSK RQFRYQLALA NSLRHALIKR 
ADWIALQARQ GCAAYDPTTA ASEMVVGFWE RTKETSLSDA IVVCLPAEGV GGLSHVRGVL 
RHALRVARGA GHSDEGYPRK ES