Gene PHATRDRAFT_44938 details

Gene Information

• Locus tag: PHATRDRAFT_44938
• ID: 7199839
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 693744
• End bp: 696568
• Gene Length: 2825 bp
• Protein Length: 757 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002178828
• Protein GI: 219116066

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.13552
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGGG TTAGAGCTGC CCTTTTCCAA GCTCTAGCTT TAGCTGTTCT CTTGAATGTA 
CCAACTCTGG AGAAGGTAGA CGCTTTTATC CTACCCTTTT CTGCTTCCTC ACTGGCAGCT 
CGTCCAGTCG TGAGTCGCCC AATTCCCCCA ACGGCCTCGC ACTCGTCGTC AGTGGACGAC 
TGCGGTAGTG GCGATGCTAC TATTTTTTCC GGCGATCCAC CGCAGCTGGC CAAAGAGATG 
GACATTCGGG AACGGATTCG AGCCGAGTCC TTTCTCCGCG TGAATGGAGA AGCTGTACGT 
ATGGACGACT TGATCGGAAG CCCCAACGCC GAGCACTCCC AAAGGTCCAT AGTCGTTTGC 
TTGCGTTCGC TCGGGTGACC CTTATGCCAG GAGCTCATCG TTCAATGGAG TCGAAGAATA 
GATGAGTTAG AGCAAAGCGG TGTCCGCTTG GTTATGGTGT CGATCGGTAA ACCCGAGAAA 
GGCCGTCAAC TGATTCAGCA CTTGGAAATT CCAAGTGGCG AGGATTATTT GTTTGTCGAT 
CCCGTGAACG CACTGTACGA CGCCATCAGT CTAAATCGCG GAGTGGACCG TACCTTTTTT 
AACATTAATA CGCCCCTTGC CTTCGTGGAA CGCTTAACGA AAGAGGATGG AATGAAGGAT 
TTGGTGAACA TTCTCGGCAA ATGGTCTAAA GGTATGTGGG TACGATGATT ACTTCGAGAA 
TCTTGCCTGC TTCTCTTGCA TGCAGACTTT TTTGACTTTT AAATTCCATT ATTACATTCG 
CAGCGTTCTT CATTCCCCCC AAAAATGAGC AGGCCTTTCT GCAGGGAGGA ACCTTTGTTT 
TCGACGGCGC CAAGACTTTA TTCGCGCATT ACGATCCTTC GACTGCTTCC CACGCTTCTG 
TGGACAACGT TCTGGAGATT GCTTATAGAA AACAGAGTCT AGCGCCAGCA AAGTAGATTC 
CGACAAGACC GGCTGGAACA AGTGGCTGTT ATAGTTTCAA TATGTGTAGT GAATGACGCT 
TTTGTGGTAC AGTAAACCTC GATCTTACTG TCGACAGAGG CCGATCAAAA TAGAAACTAA 
GTATAAGAAC TTTACAGCTA TAGTTCGAAT GAAATGGGAT CCTTTACGTT AGGGTACGCC 
TTTCTTTGAC TGTGTGAAAA TATAGTCTTT GTTTGAACTC CGTTTGCGAT GTTGAAAATA 
GGGTAGGGCA CGTTGCTTTT ACAGTCCCAC CGTCAGTGAC GCTCATTTTT TCGACCCGCG 
CGCACGAAGT CGTAAAGCCT CAGCCTTCGA TGTGAATCCG CACCGCGCAT CGCCAATGGC 
ATTTCTCTTC CGTCAATCAG TGCTAGACAC TTTGCTTCCA ATTGCACGGT GTACGCGGGT 
ATCTGTGGAC ACTGATATAG TAATGGGTTT GCCTATGCTT GCACAGCTGG TTGAACGAGC 
CGTCAAGCAT CCAACGGTGA GCCGCGCGGC TCTTTTTTGG CCAATGTCGC ATCGTTTTTT 
GTCGTCCCAA CGACCGAAAA CAACTTCGAC GTCACTCTTT GACAGCGCGT CCGATTTTAT 
GCATTCGCTA CGGGTCAAAG CCACTAACGC GCTCACTGCT ACACTTTCGG TACAAGAACG 
AGAGCAGCTT TTCTCGCGAC TTACTCCGCC TCAACAGGAA AAACAAGACG GCAAAACAAA 
TGATGACAGG ATGGACATGG AGCATAGCAT TGCGGAAGCC GTTGCTGCAG CTCGTGCACA 
AGAAGCCAAG AAACAAGAAG ACAAATGGTC CAAGACGAAA GAAGCAATTG AGAAAGAAGC 
TGAAAAAGCT GCTAGAGAGC GAGTGGAAAA TGAGTTTAAA ATTCAACGCC GAAGAATAGA 
GTTTGAACGC TGGCAGACAC AGGTCGAAGA AGAAAAACAA CGAAGGAGCA ACAAGTCGAA 
AGTAGAAGCA GCTCCTGGTC CGGTTACACG AGGTGAAGTC GTGGAACAAA GCGTGGAAAG 
CGAAATAAAC GTTCACCCGG TTCTGGGCGC AGCGATTGCC GATTTTGGAC ACAAGCGAAT 
TCATGTGGTA TCCGCTCATG CTTTATCGAC GATTCCTGTC TGGAAAAAGC AACGAATTTA 
TCGACACGAT CGCGCTAAGG CTATGGCGAG TGACAAAATG AAAACGCTGC ATTTAGGGAT 
GCCCGGAATA ATAGGGTTGC ACGAGGTGAG GGAAACAAAC CCAAATAAGC TTCTGTACGG 
GAAACTGGCT TAAATTCTGT GCATTTTCGC TTTAGGACCT GAATGGGAAA TTATCGATTA 
TTGATGGGCA ACACCGTGTG GGAATGATGA CTATCCTTCA TGAAAAATGT GCATCGCATG 
ATGACTTTGA CTTGGATCGA GTTCTAGTGG AAGTTTATCC ACAGAACCCT GATCATGTGG 
ACACACATGC TCAGGACCTT TTTCTCGAAG TGAACAAAGC CGAACCAGTC AAGTTGGTTG 
ACATGCCTGG GGTCGCCAAA GGATCGGATC GTAAAATAAT TTCAGAAGGA GCTGAGCGGA 
TTGCCGAGAA GTATGCGGAG ATGTTCAAAT CCAGTCAAAA ATGTCGCCCC CCTCATTTGA 
ACATTGATAA TCTTCGCGAC GCACTGTTTG CGTCGAATGC AATAAAAAGG CACAACCTCA 
AAACCTCGAA GGCTGTAGAA GCTTGGATGC TCGCGAAAAA CCAATCTTTG GCTGATCTCT 
ACAAGGACCC AGCTGAACAA GAGAAGGTTT CTAAGACGGC TTACGAGAAA GCAAAAAAAT 
TTGAATTCTA CTTGGGACTT GACCTTAGTT GGCTGTACAA ATAAAGCATG GCGTGTCAAA 
ATTCC 

 

Protein sequence

MKRVRAALFQ ALALAVLLNV PTLEKVDAFI LPFSASSLAA RPVVSRPIPP TASHSSSVDD 
CGSGDATIFS GDPPQLAKEM DIRERIRAES FLRVNGEAEL IVQWSRRIDE LEQSGVRLVM 
VSIGKPEKGR QLIQHLEIPS GEDYLFVDPV NALYDAISLN RGVDRTFFNI NTPLAFVERL 
TKEDGMKDLV NILGKWSKAF FIPPKNEQAF LQGGTFVFDG AKTLFAHYDP STASHASVDN 
VLEIAYRKQS LAPANPTVSD AHFFDPRARS RKASAFDVNP HRASPMAFLF RQSVLDTLLP 
IARCTRVSVD TDIVMGLPML AQLVERAVKH PTVSRAALFW PMSHRFLSSQ RPKTTSTSLF 
DSASDFMHSL RVKATNALTA TLSVQEREQL FSRLTPPQQE KQDGKTNDDR MDMEHSIAEA 
VAAARAQEAK KQEDKWSKTK EAIEKEAEKA ARERVENEFK IQRRRIEFER WQTQVEEEKQ 
RRSNKSKVEA APGPVTRGEV VEQSVESEIN VHPVLGAAIA DFGHKRIHVV SAHALSTIPV 
WKKQRIYRHD RAKAMASDKM KTLHLGMPGI IGLHEDLNGK LSIIDGQHRV GMMTILHEKC 
ASHDDFDLDR VLVEVYPQNP DHVDTHAQDL FLEVNKAEPV KLVDMPGVAK GSDRKIISEG 
AERIAEKYAE MFKSSQKCRP PHLNIDNLRD ALFASNAIKR HNLKTSKAVE AWMLAKNQSL 
ADLYKDPAEQ EKVSKTAYEK AKKFEFYLGL DLSWLYK