| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44935 |
|---|
| Symbol | |
|---|
| ID | 7199836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 681095 |
|---|
| End bp | 688037 |
|---|
| Gene Length | 6943 bp |
|---|
| Protein Length | 2187 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178826 |
|---|
| Protein GI | 219116062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC TAGAAGATCA AAAAGTTATG GCGGAAGAAG CATTGGCTGG AGAAGCCCCG
GTGTCTTCGG TGGGCAAAGA CCAGGAACCG CTGTCGATTT CTTCACCTTT GCCTACCGTG
CCGGAAGGAG CTCTCGACGA TCGCCCGTCG GAAACTCCTT CGGCACTATT TGCTTCGCCA
GGTCAGAAAA ACTTTGATCC AATAATCAAG AAGCTACGAC GAGGCGATCT GGTGCGCATT
TCGGAAGCGT AAGTGAATGA GTTAGCGGGT CCGGTTGGGA CTGATGTACA TTTCTTGTCT
CATTTTATCT CCTCTTTCTG GACTATATTT CTAGTGGCAT TCATTCCGAG AGGCGCTTCC
GCGATCGCCA AGGCCAACTT GGTCGGGTGA GTGTATGTCA CGATACGGTA AATGAGGGAA
CCGTGGATGT GGAATGGATC TTGGGAGGCA AGTCGACCAA GTTGCCTAGA AACGTGCTGC
TCTACACCAC AGCGACTCAA GAGGGAATGA CGGACGAGTC GATGGTGGGG CCCTTGGGTT
CTCGACAACG CCGGAAACGC AAGCAACCGG ATACTATTGA TCCAAACCCG GCGCTGATGC
AAAAAGTCGT CAAAAAGGCA GCCCCTACAA AGAGCAAAGC CACGAAAGTG TTGCCGACAA
AGGCGAAAAA AGCAAGCTCG GTGAAGGAAA AGCCAGCGAT ATTACCAAAG ACGGTTGCGT
CGAAAAAGAA ATCTAAGTCG GCAGGATCCA AACGCAAGAC GGCTCCCGCT CCGAAAAAAA
CTGTCGAAAA GAAGCTGAAA CAGAAGACTT CTGCAACGCA AACTCCGCAA CCGACAACGA
ATATTCTCGA GCTGTATGAG AAACACCGGC GAGAGTTTGA ACGCATCGTG GCGCGGCTAG
AAAAGGTGGA TCAGTTCGGT TGGTTCTGGG ATCCGGCCCC GGCGGAGTAT GACGAGCAAT
ACGACACTGT ACCCGATCCA GCGAACGCTC CTGCGGAAGA AGCGGTCAAT GAGCCGAAAT
GGAACAATAT GCGACCTATG CAAGACGAGT GCGGTACAGC TCAGACTTCT TCAAGGAAAG
ATTCCAATAC TGTAGTAGAC GCAACACTGA CATCGAAATC GGGGGATGTC ACTGTTGAAA
AACCAACGTC ACAAAATTTA GTGTCGTCCA ACGCGACTGT GTCCGAATGT AACAAATCAT
CTTCAAGCCT TACTCCCCAA CCCACAGGTC CCATAACGAT CTATCCGTCA CATCCTCCTT
ACAATTGGGA GATGGTTAGA CGACGGATGG CAAATGGTCG ATACGTTCTG GATCGCGAAC
GGAAAGAAGC AGAGGAACGT GTTGCTCTAC TTCGACCATA CTACAAAGCG ATGGGGAAGA
AGACGCCCAA GAGGAAAAGG AGTGGAAACA ATACTCGTGT GGTACATCCT AAGGGGGTTA
ACTGGGATCT TTTCAAAGAG GATGTGCTGA GTATGTGTAG GGCCGCAATA GAGAGGGAAG
GCGAAGACGA CTCAGAAGCT CGAGGCTCAG TGATGGCGTC GGCGACTAAA GTAAAGGACG
CCGTCTGCCA AGCTTTTGAG AGAACAGGCT CTCGGCAAAT GGGGGAAATG GAAATTGCCG
ATCTCCGATA CAAGTTTTCC TTAGCTCTTG AGAAAAGCCT CAACGAGGAA GCGGCGATGC
AGAGCTGGAG GAAATCACCA TATCCGGAAA GATGCTACGA TCGACTGTCG CATGACGTGG
TATGTGCAGG CCTATCCGAG TTGGACGAGC ACATTGCTAC CTACGAGCTT CGGACGAATC
TTCCAGACAG GTTTGTAGGA ATTTCGTATC GATACGATGA TACTGGACAG AGCGAAGCCT
GGATGAAGTC AGTTGTCGAC GAAACAGAGT CGCTTGACCG AAAGAGGAAA AGTGCAAACG
AGGAAAAACA AGCTGCCTTG GCTTTGGCTG GAGACGACGG AGTAACTAGA GCTCAGGTAT
ACGCATCAGT GCAGTCGCTG CTTATCGGTG TGCAAGACAA AGTCATGACA GATTTAGGCG
TTTTGAAGCA GCCTGAACTA CGGAGTGCCA ATTGGTTCTC ATCCGGGACT AGCAGTGGGC
ATTGTCCGAC GTCAACACAA CCGACAAACG ATCAGCATCG TGCAAATGGC GTGTGTCTTG
ATGAAAAAAA GTCTCCGGAA GTAGTCGAAC AACCTGTATG GGGAATGGAT TGCTACACGA
GGCGAAACAT TGCATCGTGC CTTGAGACGG ATTTTGACCC AGCGACTGCG CTGCACTTCA
TCGAAAAGTG GTTACTACCG GCGATTAATG CCTGTCCTAT TGATCTTGCG CACAAAATAT
CAAATGCAGC TCGGATACTT GAAGGATTGC CGTTTGAATC GATGGAGGAT GGGGAATATG
GAGAGAAAGA GAACATCAAT GATCGCAAAA CTCCGGAGAA ACTGTGGGCG TACTCTCCGC
TTGGCAAGGC GCTGCGTGAA AAAATTAAAG TTGCTGCTCC AGTCTGGTTG ACCGCTGCAG
CATATCTTTT GCGAAAAGCT TACACCGCTT TAGGTCCTGA CTTTTTCCGA GTACACCCAA
AAGGCCATGG GTCAGTTTTA CTGAATTCCA AAGTTGGCGC AAACACGCTT GTAACGTTTT
ATCGTGGAGA GGTATATCCA TCTTGGAGAT GGGGTGAAAA AATGGACGCA ATTGAGATCA
CACAAAGTAG AAAAGCGCTA AAACCAGCTC TGCCTGATTT TTATAACATG GCCTTGGAGC
GACCCCAGAT CGACCCTCGC GGCTACGGTC TCCTCTTTGT CGATGCTTCA AGGAAAGCAG
GTCACGGATC TTCTTTGTCC CATAGCTGTG CGCCGACATG CGAGGTTCGA GTTACCGCTG
TTAACGGCGA GCTCACCCTT GCGATGACAA CATTGAGAGA GCTAGAAATG GGGGAGGAGC
TGACATTTGA TTACAATGCT GTCACCGAGT CTTTAAATGA GTATCGATCT GCGGTCTGTC
TCTGCGGATA CGGGAAATGC AGAGGTTCTT TCTTACATTT TGCAACCGCA GATTGCTACC
AATTAGTTTT GAATCGAAAT GCCCCTATTG CAACTCGTTT TGCAAACCTT GTAAAAGGAA
GTATGAAGCA GGTCATGTCC GACGAGGACA CTCGGGTATT GCACAATCAT GGCTTTCTGA
CTGCGGCCTT CGGCGCGATC AGTGTAAACC GCCGCAATTT ATTGGAAGGG GGGCAAAAGG
GTGTTTTGGA TACTTTGGAT ATTGTCCCTG TTTGGTTACG AACTTTTGTT GCTGACACCT
TGCGCTACAT TGAATACGAG CGCAGGGCCT TGCCAATCGC GTTGATTTGT GATCATGTTT
CTTCGGCAAA GCGAAAATCT ACTTTGGAAA CGGCTTCCAG GAGTTCAGGG AAGGCGCCAA
CAAAGCCTGA GCCCCCATTT TTTTACTTTT GTCGCTCCGA AGTCGATCTA CTGAAAGCTT
TGCTGAAGAA AGATGGATTC CCAGACTCGG TGTCTGGGAT GCAGCTCAAT CATGCCATCA
AGAAAGTTGG CTCAAACTAC TGGCAGGGCC TTACGGAAGA GAAGAAGGAG TATTGGAAGA
AGCTTGCTGA AGCCGATTTC CAAAGGCGGA AAAAAGTATG GCATAAGTCT CAAACTGTAA
GTATTTCCAA AGGTCTAAAA ACATCGGGGA AAACTGAGAA TACTGAATCA AAAACTTTAG
ACATGAACGA CCTGCTGCAT GCTTCTGATG TCTCGTTCCC AGACGCGGAT TCAGAGGGTG
TCTCTGCAAT GGAGCAGCGC ATTCAGCAAC TTACTCAGGC GCTTAGTCGA ATAGGGAGAG
TTCTGGATCG ACACAGAGAG CTCGTTTTAG AAGAAGCTAG CAACGATCCT GTTGAACCAA
GTGCCAAGTC TTTATTGGAT GTTGTCCATG CACCACTGAA AGTGTGCTCA GACTTGAAGG
TCATCGGGTG GTTGTGGAAT GGTACGAATG GTGTCGTGCC GTCTTTATTT GAGTGTATTG
AGAGCGCTCG ATACGCAAGA CCTGAGCTTC TGGAAAAGCT GATATTGGTT CGAACGAAAT
ACGGCCGCCT CGACTCTTTC AGTGCCTACG AATTGGATGA TCTGTGTTTG AACAACACGC
AAATCATAGA GGGGCGCCGA GAGCTGGCAG AAGCCTTGAT GGAATTCCGG AAAACCATAC
TTGATGAATT GAGAATTATG GCCAAGGAAT TTAGAAATAA CAAGATTTGT GTGACTCCGG
CCTCGAAGTT GGCACCAGAC CATGTTCTAG ATTACGCTAC ACAGGCAACG TCAGAGTTGC
CAGAATTTGA TAAAATACTT TTCTCTGGAA GCAGAGAAAA CAATCAAGAA AGCACGGAGC
AGAGCAGAGC TTTGGACGAA GAACCCATTG TTGAGGAGAA TGCAAGCTCC GCTATTGCTA
GAACGATGGA GTATTTAGTC ACAGAAGTTG AACGAAGAGG TCAAAAAGCG GAGCGCCAAT
CTAGCTTTGA AATCGACAGA AAGCCTCCAA AGATCGACTC ATGCAAGTCA AAGTCAATGA
GTAAGACGCA ACAATTTGAG TCCAAAGGAC TTTTCGAAAA TAGTGGCTGG CTTGAGCATT
ACAACGAGCG TTTTGTGTTG CATGCCTGTG CTGACTTGCT ACTGTTCTAC GCCCGTACAA
AAACATTTTT TGAGATGAAT TCCTACAAAT TATTGGAGTC CACTCCGATT GAGGTCTACG
CAAGAGAACT CGGCAATGCT GTGCCGCGAT CTGCAATCGA TGCTAATATT ATAGATCGAA
GAGGTGTAGC CTTTAAAGAA ACCGCCTTCG TCAGCTCGGA CGATGGGAGA GTCGCTACGT
CTATCCACAC TGTAAAAACC TTTGAGGATG CTACTTCCAG AACGCAGAAA ATTTCGAAGC
TTTGCTCACC TGATGATATT GTTGCCGAAG TTACTGTAAC ATACAATGAA GACTACGTTC
TGTCCCAGCT TCTGCAATGG TACAACGGTG GTATAGGCTT GAAGCCCGGG ATGCCTGACA
TGATTGGCTG TGTTGTATTG CCATCGATTC CGGAATGTTT TTCCAGCGAA ATGCTTGAAA
AGTCAAACGT GAAACCGGAT AAGAGGACTA CGTATGAAAC AAAAATTCGC CCCCGTCTGA
TCGAGTGGCT ACAAGATCCC TACCAAAGGG GAAATCCATG GCCTGACAGC GTCAAAAAAG
CATTCCTCCG ACCTGGATCT TCGTCCGCGC AACTTTTGCT TTTTGGATCC CCTGTCATTG
ACTTTCTTGC CACAGGAGAC GAATCCAGTA TCCTAGACGT CTTAGGGGAT TTGAATTCTG
ATAACAAGAT TGAGTCAAAG AGCGCTTCTG CCGTTATGTT GTCTTCTGTG GACAAAGGTC
GGCCTGCTCA GGCCATTTCA ACCTGGGTAC AATGTGAAAA TCCTGTTTGT TTGAAATGGA
GAAAAGTACC ATGGCATGTT GACGTAGACC TGTTACCGGA GAAGTTCTAT TGTAAGGACA
ACGCCTGGAA CCCCAATGCT AACTCTTGTA CGAAAGCTGA AGACGATTGG GACAATGCGG
ATGCCATGGT TGGTAGAGAC GGCAAGGTCG AAGGCTCACC GATACGTAAA AAGAAGCATT
CAGAGCTTTC GCCTATTGAA GAGAGTAGTT TCACAGCTGG TGGTAGGTAT ATGAGAGCTT
CATTACGCCA CTATGGGGCC TGCCAATGTG ACTAACTGTC TCTGTTTCTG CTATTTAAGC
TCGTTTTGAT ATTTTGCGAA AGGAGAAGTA TGTAGTTGGT CGGGTTGTGA AAGTGGATTT
CTCCGGCAAA GTAAAGCGTA TCTTGTTTCA TTTTCTGAAA AAGCATTCCA AGTATGATGA
ATGGATCGAA TTTGGCTCGC CCCGTATTTC TTCTCTGCAC TCCAAGATTG CTCCACGTGC
AGCAAAGGCC GCCGTCGATG TTTCCTACGT TTCTTCTTTG CGCGAAGTTG GCCAGGATGT
GGCGAAGGGA AGAACACCCG CAAAACAAGC GAAAGGCAAG AAACTTAATG CAAAACCGAA
AGTTCGTAGA CGAGATGTTC CACATAAGCG GCTAATCCCC TCACACGGGG ATCGTCCCTC
GGAAATATGC CAGCAGATCG ATACAGGAAT GAGGTCTGCT AACGATATGA AGTCGCTGGT
GGATAGAGTG CAGGAGAAAA TGGAATTGAC AGTGAATGAA AACTTGAAGC AATTGAAAAA
AACGAAGAAA GCTGGAGGTA TAGCAGATGT GGAGGTTCAA CCCGAGAGTA TTTTAAGACC
TGAAAAGAGA AAGAAGATAG ATTTAACACG CTCGGCATCA AGAACACAAT TCTCCGGTGG
GGAGTTTCGG AGTTTGAAGA GTACCTTGGT GGAGAAAGTC AACGGACCTC TGCTGGCGGA
TTCGTTGCCT TCTCAAACTC ACTTGACTGT GAGTAAACCG TCCCAAAACG GATCAGGTGG
TAGTGATACT TCGGTGACCA AAGACCTGGA TTGGACTACA ACGACCCAGA ACTCTATATC
AAACGGATTT CATCGACTTA CTCCCGGTAC TTCAGAGACT CCTGGGGCCA CCGACGGTAC
CTGTAAATGT GATGACCAAC CCTTGACAAC AATCATCAGA CCACAGTCCC TTCCTTTTCA
GGAAGATACA AGCAGAATGA GCACGGATGC TCAATGTAGC ACCGGTAGAG GAGTAATTGG
AACGTAGCTG GCTCAGCCAG CACCTCAAGC TTGAATGCAT AATAGCGATC TCAGTCCTAG
ATGAATAGGT GTACAGGCTT CGCTTCACCC TACAAAGGGA GATTTGCAGA AAATCTCACA
GTCGTACCCC TGCGGAGTCA TCAGAAATTC GGAATTAGTC AGAACTGATA TTTTTAACGA
TCTAAACCCA AATGTTTCGC TAAAATAGTA AAGATGTAAG GGG
|
|---|
| Protein sequence | MQTLEDQKVM AEEALAGEAP VSSVGKDQEP LSISSPLPTV PEGALDDRPS ETPSALFASP
GQKNFDPIIK KLRRGDLVRI SEAGIHSERR FRDRQGQLGR VSVCHDTVNE GTVDVEWILG
GKSTKLPRNV LLYTTATQEG MTDESMVGPL GSRQRRKRKQ PDTIDPNPAL MQKVVKKAAP
TKSKATKVLP TKAKKASSVK EKPAILPKTV ASKKKSKSAG SKRKTAPAPK KTVEKKLKQK
TSATQTPQPT TNILELYEKH RREFERIVAR LEKVDQFGWF WDPAPAEYDE QYDTVPDPAN
APAEEAVNEP KWNNMRPMQD ECGTAQTSSR KDSNTVVDAT LTSKSGDVTV EKPTSQNLVS
SNATVSECNK SSSSLTPQPT GPITIYPSHP PYNWEMVRRR MANGRYVLDR ERKEAEERVA
LLRPYYKAMG KKTPKRKRSG NNTRVVHPKG VNWDLFKEDV LSMCRAAIER EGEDDSEARG
SVMASATKVK DAVCQAFERT GSRQMGEMEI ADLRYKFSLA LEKSLNEEAA MQSWRKSPYP
ERCYDRLSHD VVCAGLSELD EHIATYELRT NLPDRFVGIS YRYDDTGQSE AWMKSVVDET
ESLDRKRKSA NEEKQAALAL AGDDGVTRAQ VYASVQSLLI GVQDKVMTDL GVLKQPELRS
ANWFSSGTSS GHCPTSTQPT NDQHRANGVC LDEKKSPEVV EQPVWGMDCY TRRNIASCLE
TDFDPATALH FIEKWLLPAI NACPIDLAHK ISNAARILEG LPFESMEDGE YGEKENINDR
KTPEKLWAYS PLGKALREKI KVAAPVWLTA AAYLLRKAYT ALGPDFFRVH PKGHGSVLLN
SKVGANTLVT FYRGEVYPSW RWGEKMDAIE ITQSRKALKP ALPDFYNMAL ERPQIDPRGY
GLLFVDASRK AGHGSSLSHS CAPTCEVRVT AVNGELTLAM TTLRELEMGE ELTFDYNAVT
ESLNEYRSAV CLCGYGKCRG SFLHFATADC YQLVLNRNAP IATRFANLVK GSMKQVMSDE
DTRVLHNHGF LTAAFGAISV NRRNLLEGGQ KGVLDTLDIV PVWLRTFVAD TLRYIEYERR
ALPIALICDH VSSAKRKSTL ETASRSSGKA PTKPEPPFFY FCRSEVDLLK ALLKKDGFPD
SVSGMQLNHA IKKVGSNYWQ GLTEEKKEYW KKLAEADFQR RKKVWHKSQT VSISKGLKTS
GKTENTESKT LDMNDLLHAS DVSFPDADSE GVSAMEQRIQ QLTQALSRIG RVLDRHRELV
LEEASNDPVE PSAKSLLDVV HAPLKVCSDL KVIGWLWNGT NGVVPSLFEC IESARYARPE
LLEKLILVRT KYGRLDSFSA YELDDLCLNN TQIIEGRREL AEALMEFRKT ILDELRIMAK
EFRNNKICVT PASKLAPDHV LDYATQATSE LPEFDKILFS GSRENNQEST EQSRALDEEP
IVEENASSAI ARTMEYLVTE VERRGQKAER QSSFEIDRKP PKIDSCKSKS MSKTQQFESK
GLFENSGWLE HYNERFVLHA CADLLLFYAR TKTFFEMNSY KLLESTPIEV YARELGNAVP
RSAIDANIID RRGVAFKETA FVSSDDGRVA TSIHTVKTFE DATSRTQKIS KLCSPDDIVA
EVTVTYNEDY VLSQLLQWYN GGIGLKPGMP DMIGCVVLPS IPECFSSEML EKSNVKPDKR
TTYETKIRPR LIEWLQDPYQ RGNPWPDSVK KAFLRPGSSS AQLLLFGSPV IDFLATGDES
SILDVLGDLN SDNKIESKSA SAVMLSSVDK GRPAQAISTW VQCENPVCLK WRKVPWHVDV
DLLPEKFYCK DNAWNPNANS CTKAEDDWDN ADAMVGRDGK VEGSPIRKKK HSELSPIEES
SFTAGARFDI LRKEKYVVGR VVKVDFSGKV KRILFHFLKK HSKYDEWIEF GSPRISSLHS
KIAPRAAKAA VDVSYVSSLR EVGQDVAKGR TPAKQAKGKK LNAKPKVRRR DVPHKRLIPS
HGDRPSEICQ QIDTGMRSAN DMKSLVDRVQ EKMELTVNEN LKQLKKTKKA GGIADVEVQP
ESILRPEKRK KIDLTRSASR TQFSGGEFRS LKSTLVEKVN GPLLADSLPS QTHLTVSKPS
QNGSGGSDTS VTKDLDWTTT TQNSISNGFH RLTPGTSETP GATDGTCKCD DQPLTTIIRP
QSLPFQEDTS RMSTDAQCST GRGVIGT
|
|---|
| |