Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44932 |
Symbol | |
ID | 7199616 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 673188 |
End bp | 674061 |
Gene Length | 874 bp |
Protein Length | 280 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179044 |
Protein GI | 219116498 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.996526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTCG TGGCTGAATC CGCATTTCGA ACTTGCGTTG TTCTTGTTGT ATTTAAACTC TCGGGGAGGG AAGCATTGAG CGAGTCCGTA GAAAATTCTG AAGGAAAAAG CTTTCTACAG GGCCACAAAA TTCCATCCGA AACGCTTTCC TCTTTTGGTT CGTATCCCAA CCCGCTCAAC CTCACGGACA GCGACCGCGC CAGATTTCAT CCCGTTATTT CGTTCCCCAC CATCCATACG CAAGACGGAA CCGTCGTGCC GAACATTCAA ATATTGGATT TTACATCAGC CAGTGCACAT CGTCAGTTGG CGACACCCCA GGAACAACGT TTGAGACGGG AGGGAGGATC GTCGCCGACG GATCAACTTG TACGGAAAGA CTATGCGGTA GGACGGTACG ACGAAAATCG TGTGGGGCTT TACGAGTCTG CTCTGTTTGA CGACTTGGAA AACCACATCG ATGGGTACGC AGGACGGCGG ACTCTGCACA TGGGCATTGA CTTGGATGGA CCTTTGCTGA CTCCGGTGCA CGCGTTCTGC GACGGCACAG TTCTCAACGT GGGATTTAAC GCCGCATTGG GAGACTATGG AAATGTTATT GTTGTAGAGC ATAATCTTCC TTCACAAAAT ATGGACTTGT CTACGGAACG TCGACGAGTC TATGCCTTGT ACGGCCATCT AGATGATGCG GCGATCGTCG ACAAAAAGAC AGGCGACAAG ATTGTCAAGG GCCAAGTACT GGGCAGGATG GGAGACATCC ACCAAAACGG GGGGTGGTTC ATACCGCACG TTCATTTTCA GCTATCGCTT CATGCCCCAG AAACGCACGA CATGCCCGGA GCTGTCTCGA TGGCTGACCG GACCCGAGCT TTGA
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Protein sequence | MGFVAESAFR TCVVLVVFKL SGREALSESV ENSEGKSFLQ GHKIPSETLS SFGSYPNPLN LTDSDRARFH PVISFPTIHT QDGTVVPNIQ ILDFTSASAH RQLATPQEQR LRREGGSSPT DQLVRKDYAV GRYDENRVGL YESALFDDLE NHIDGYAGRR TLHMGIDLDG PLLTPVHAFC DGTVLNVGFN AALGDYGNVI VVEHNLPSQN MDLSTERRRV YALYGHLDDA AIVDKKTGDK IVKGQVLGRM GDIHQNGGWF IPHKRTTCPE LSRWLTGPEL
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