Gene PHATRDRAFT_44932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44932 
Symbol 
ID7199616 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp673188 
End bp674061 
Gene Length874 bp 
Protein Length280 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179044 
Protein GI219116498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.996526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTCG TGGCTGAATC CGCATTTCGA ACTTGCGTTG TTCTTGTTGT ATTTAAACTC 
TCGGGGAGGG AAGCATTGAG CGAGTCCGTA GAAAATTCTG AAGGAAAAAG CTTTCTACAG
GGCCACAAAA TTCCATCCGA AACGCTTTCC TCTTTTGGTT CGTATCCCAA CCCGCTCAAC
CTCACGGACA GCGACCGCGC CAGATTTCAT CCCGTTATTT CGTTCCCCAC CATCCATACG
CAAGACGGAA CCGTCGTGCC GAACATTCAA ATATTGGATT TTACATCAGC CAGTGCACAT
CGTCAGTTGG CGACACCCCA GGAACAACGT TTGAGACGGG AGGGAGGATC GTCGCCGACG
GATCAACTTG TACGGAAAGA CTATGCGGTA GGACGGTACG ACGAAAATCG TGTGGGGCTT
TACGAGTCTG CTCTGTTTGA CGACTTGGAA AACCACATCG ATGGGTACGC AGGACGGCGG
ACTCTGCACA TGGGCATTGA CTTGGATGGA CCTTTGCTGA CTCCGGTGCA CGCGTTCTGC
GACGGCACAG TTCTCAACGT GGGATTTAAC GCCGCATTGG GAGACTATGG AAATGTTATT
GTTGTAGAGC ATAATCTTCC TTCACAAAAT ATGGACTTGT CTACGGAACG TCGACGAGTC
TATGCCTTGT ACGGCCATCT AGATGATGCG GCGATCGTCG ACAAAAAGAC AGGCGACAAG
ATTGTCAAGG GCCAAGTACT GGGCAGGATG GGAGACATCC ACCAAAACGG GGGGTGGTTC
ATACCGCACG TTCATTTTCA GCTATCGCTT CATGCCCCAG AAACGCACGA CATGCCCGGA
GCTGTCTCGA TGGCTGACCG GACCCGAGCT TTGA
 
Protein sequence
MGFVAESAFR TCVVLVVFKL SGREALSESV ENSEGKSFLQ GHKIPSETLS SFGSYPNPLN 
LTDSDRARFH PVISFPTIHT QDGTVVPNIQ ILDFTSASAH RQLATPQEQR LRREGGSSPT
DQLVRKDYAV GRYDENRVGL YESALFDDLE NHIDGYAGRR TLHMGIDLDG PLLTPVHAFC
DGTVLNVGFN AALGDYGNVI VVEHNLPSQN MDLSTERRRV YALYGHLDDA AIVDKKTGDK
IVKGQVLGRM GDIHQNGGWF IPHKRTTCPE LSRWLTGPEL