Gene PHATRDRAFT_44901 details

Gene Information

• Locus tag: PHATRDRAFT_44901
• ID: 7199816
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 589725
• End bp: 596111
• Gene Length: 6387 bp
• Protein Length: 1971 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179027
• Protein GI: 219116464

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCGGG GACGTTCTGT AGCGACAAAC GGGGACGACG GCCACCCGCT TTACCAGTCC 
AGACCCGTTT CAACCCCGGA AAAAGGAGCA CGAATGGCGA CCTTCCCAAG TTGTGGGACT 
ACCAAACAAC CATCCAAAAC GGCCACAAGC TACCAGCACA AGGCAGACAG ATACGCGGTG 
AGTGTGGAGG ATAGAGCATG TCAGAGAATT TAGAAGAAAT GGGGATGGGT TCCATAGGCA 
AGCGCCCGAA ACACGGCGAG AGTCAAGTGG ACGAAGCAGA TGTCGAGAGT GATCCTTTGG 
AGCAGACGGC AGCAGCACTT GCGTCAATCA ATATGGCCAG GTATCAAGAT TCCAATAGCT 
TTTTGGAATC ACAGCATCAA TCTCTGGGGG AAGTTTTTGA AAATCCAACA GCAGCAACTC 
ATCGTGCAAT TTCGGAGGCT TCGCACGCAG TACAACCTTC TTCGACTCGG TCATCGAAAG 
CAAGGCCATC AGAGGAGTCA GTGTCAGTCC CTCCCCCCTT GTATCACCAG AAAAAGCATG 
GCAAGCACGT CCCCGCAAAG TTTCGTGGGA CGAAGAAGGG TGGCAATATG GCGTCGCAGG 
CTGGCACGGT CAATTCTTCG AAAAAGCGCA AACTGAAACG ACGCACTTCC AATATTTCAG 
CGCAACGTGA AAAGCGCAAA AGTGCTGGTG GGAGTAGTAT CAGCAACACG AGCCGGACTG 
TTCCTGTACA GGATGACGCA CCGGATCGCA TTGTCAATCC CTTGCTGGAA CTTGTAGCGG 
CGCCAAACAG TCAACCCAGT GCCGCAGACA TGATTCCTCT TTATGATGTG TGGTTCCCTC 
GCCCCGATAC GTACTCGGTC GCGTACGCAG CCAGACTGCT CGGTTTCGAT GTCCCTGTCG 
TCGCCCCCTC TACTGCTGTC GTAACTCTAA CAACGTCATG GCCGCTGTTG CGGAATTATT 
CGTCGACGCT TAGTATTCCT GATAGTGGTC GAACGTTGCC AGCTCTATGG GAACAGTATC 
AGCAGGGTAG CTGCGAGAAT GATCCCATAT GGCAAGAAAG CACGGTAGAT CCGCTGTATG 
TGTCCCTGAT ACGACAACCA GAGCTGGGTC GTCTTTTAGT AACACCGGCT CAGCAAAGCC 
GTCTGCTGTC CTCACTCACC GACGAAATCA TGCTCCCAGT ATTGGATCTT GCCAAAAGCA 
AAGGTGGTGG GTCCGAATGG ACATGGTCAA GTCTGGCTGA TTTTCACGAA AGAAATCCGG 
AAAAATCCTG GCCTTCTTCT CTGGATACTA TTTCTTCCGG TATTTATGTT TTAAGCGACA 
ACCTGCCCAT CGGTCTCGTT TCCTATCGAT TTGAATGGCA TCCGCTGAGT CACGACACGT 
CCGAAGTGAT CCTTTCGCTG GATGGGCTAA GTACAGCCGA TGACATATCG TACATTGGAC 
AAAATGCCAC AACCCATCAT GTACCAGAGT CGGAAACCCG GTTGTTGCTT GTAACGCTGA 
TTTGCCTTGC ACTAGAACAT GCTAGGGCTT CGCACGTGTG GTATGCAACT ATTACGGTAC 
CTCATCAACT GCGCGATTTT TTTGTACGAT ATTTTCGCAT GGTACCGATC GAGGCAGCGA 
AAGACTGCAG TCTGGAGGGT AAAGCTAGAA ATACCACGAC GACCGCCGCC AAAGATTCTC 
GCCAAACACG CACTTCTGCT GGTCACGGAC AGTTTCCTGA AAACGACGAC AAATGTAATG 
TCGGACCAAG AAATTCCATT GCCGATATGG ATTCCGGAAA AGAAGTGCCG GGAGATAAGA 
TAGGTCTTCT TGTTGCAAGA TGCTCCATGT CCGAAAATGT GATGCCAAGT GCCGATTCGA 
AGCATGCAAA AATGGATTTT GCGGTTTTTT CTGCGACGAC CAGTAGTGGG CTCTTGCAAC 
ACAAGTCGAT CAACAACACA TGGACAGGAA ACGGTATACA GGAGCCTGAT GGCAATGCTA 
CGAGTGCACT AGAAACGGAC GATTTAAAAT CTTCATTGAA ATCTGAGATC AAGTCTCTAC 
AGAAGGACAA GACGCTGGAG CGACAAGATG TTGATATAGT TGGTCTTGTT TGCGATCTCA 
ATCGATGCAG CTACCGCTAC GCTTTTTTAA TGCTGACAGA AGCGCAAGAA GCACGTGATT 
CGGCCTCCAA TTACCATACG CAACATGAAG CATCTCAAAA GCAACGATGG TTGGTCCAAA 
TGCCAAGCGT AGACGAGGCG AGAGCGACCC ACCAAAATGC CGAAGCGCCA TCAACCTGTG 
GTTCAACGAT CAGAACAAAA AGAGCACCGA CTCGCAAATC CGTCCACTTC TTTACAAACC 
CTGAATCAAT TGTACGCGAT GTAAGCGTTC GGTTCCGAGG CAAGGTTAAG GACGAAAACA 
AGATTGAATT CTTTCATCTC GAATTTGATG GAGAGCTTGG ACCAAAGATT ATTGCATCTC 
GTGTAAACGA TGGGACGAAG CTGGATGTGA TGCGAGCATT TTCGCCACCT TCAAGTATTA 
GAACTGATAC TTGTACTGAA GACGATGAGA TTTTGCGTCA TCTTCTTTCT AAAAAAAAGC 
AACTGGAGGA GTTTGAGGGA AACTTTGAGC CAGCACTTCG CTCCATACTA CGAAAGATTG 
TGGAGGAGCG AACGGTTTAT GAAAGTCCGG AAACTGTCGA ACAGCGAAAT GAAGAGAAAA 
ATATCCTTTA CGAAAACAAA AGGATGTTGC AGCGGCGTAA GGAGATGGAC AAGGCTGTGG 
AGAAGCAACG CGAGCAAGAC ATGGACGCCG TTTGCGACAT TTGCAACGAC GGAGAAGTAA 
CACCAGATAA CCAGATTCTT TTTTGCGAAG CATGTAACGT CGCAGTTCAC CAATTCTGCT 
ACGGGATCGA AAGAATTCCA GCTGGGGACT ACTACTGTTT GGCATGTCGA TATCTAGGCA 
GGGACAAGTT GGACAGCGCT CCAGCTCCGC TTCCCATCAG GTGTGAGTTA TGTTGCAAAA 
AGGAAGGAGC CTACATCAGG ACGGCCGCAA AAAGTGATGA TGTATCGTTG GCTACTTTTG 
GAAAATGGGT ACATGTAAGT CTTATCGCCG TTCAAAAATT TGGCAAATGG TGTGGACACT 
AAACATTTTC CTCTCAATAG ATGGTATGCG CAAAATGGCA AGGTCTAAAC TTCGTAGACG 
AATCAAGCCC TGATCTTATC GAAGACGTTT CTGAGCTGAA ATTGGGATTT AGGCAACTGA 
ATATCAGTTG CTACCTCTGT CTAGCGGAGA GAGGGGCCAT GAATGTTTGC CGACACGCCG 
GATGTAAACG ATGGATTCAT GTAACGTGTG CAAGAGCCGT GGGAACGTGC AACGTGGTCC 
ATGGAGAAAA TGTTAAAGGA CCAGTTGAAG TCAATCCATG GACACTTTTG TGCCCTGAGC 
ACTCATCTGT ACCTGTTAGC GAAATACCAA AACATTCTTT ATCCACCGAA ACACTTATCT 
CAATTGCCCA AGAATTTCCA ATAGAGCCCA AACCTGCGCC AGCCCCCATT GCCCTGATTC 
CGTTCAATAC TGCAAACGAA ATCGAGCGCA AAGCCCTGCT CGCGAACAAA GCGTATGAGG 
CCGAACTTTT GGTTGAGATA ACGATGAAAA AACTGTCCGG TGTCCGATGC GAGGTATGTG 
ATCAAGCGGA AGAGAACGGC ATTGGTCTAA CTCGATGTTC TGGCTGCGCA ATAATTTTTT 
GCGCATCTTG CAAGCTCGAT GTTGATTGTA TTCAGGGCAA CTACAAATGC CCACGGTGTA 
TATTTGTGGA AACGGCAATC AAAGAAGGTC GGGGTTTCAC GACGCCGTCT TGTATCGCTT 
GCTATCAACA AGGCGGATGG TTACGTGCTA GTCACGCACG TCCTGTTAGT AAAAAGAGCT 
ACTGGAAACA CAACCCCAGA GAATTTGAGA AGTCATTGTT TGGCCGGCAG CTATGGTGTC 
ATACGCTCTG TGCATTGTAA GTCGATATGA GTGTGTTCAT ACCAAGAATT TTCCTAGTTG 
CTGAAATCTG AGTTTGTTTT CACTAGTTGG CACAAGCAGT TGATCCTATC TCCCAAAACC 
GGCGAGATTG ATCTTTCTGA TGTTGTGATG TCCAGCGGTC GCGGTTTGAT AAAAGGAAAC 
ACGTTCTGCT TTTTGTGTGG ACAATCTGGT GGCTTGAAAT TGCAGTGCGA TAACGAAGGT 
TGTCATACGG AAAAAAACAA TCGCAAGTCG CATACATGTT TCCATGTAAC TTGCGCTCGC 
CAGGCTGGAT TGGAAGTAGA GGCGTACGAT ATCGGCCGAA AAATGCATTT TTATGGTAAG 
TCATTCTGAA TTTTTGCAAG TTCGTAAGGA GTAGTTTTCC ACTCACGATA TACACTTCAA 
AAATTGAAGT AAAATGCTAC AGACATGGAG GTAACGAATT CAACCTACGA GCGCGATTGG 
AAGATATGAT TGAAAAAGAG AAACGGCGAG CCGGAAAAAC ATTTGCGAGG GTCGATTCAC 
CCATGACGTT TGCCCATGCA TCGCGCCTTC TAAATTCCGC TATTCTCGTC CTTCGTATCT 
TCGGCTGGGC GTGGCGATGG GCAGAATGGT GGGTCGACTA TGATTCATCG TGGGAACCAC 
TGCTGGAACC TGGGGAGGTA GAAAGTGACA TGACGAAAGA GGAGCTGAAA ATAGTTACAA 
GTTCTCGAGA TAGCCGTTGC GAGGACGCAC GACAGTGTCG CTTGGCTGCA TTTGGAGCAG 
CCTTAAGAAA TCGCTGCTAC GACACGGAAG ACGATTTCGA CCGCGAAGCC CTTGACCGAG 
CCTTGCGCGC CGTGCTGAGT ACACCGAGCC TGGTTGGACC ATTGGAAGAC TTTGAAAAAG 
AATTCTTCGT GGATTGGCTG GGCCGAGCCT ATCGGTCAAA GAGTAGGATT CTTGGCTTTG 
GAGAGGACAA GATTAGTGTT TCAAGCAGCC GGTTTTGTGC ACACATTGAT GGAGGAACTC 
CTAAACATGA ACTAGGTACG CGGCCAACTC CTGGTACCCA ATCACTCCAA AAAGGCAAAT 
GCTTTGAAGA GTACGTTGAG GAAACGGACG ATTTCTTGAA GACGAGTGTG ATGGTTGACG 
ACATCCGAAG CTGTCCTCGA CGAGACAGAG CAGCTACGTC CGAAAGTTCT CCTGTGGCAA 
ATCCTTCTGT CAAAGTAGGC GAGCCATCGA TCCTTTCAAA GAAGCGACCC GGACGACCAC 
CGTCGGTGGA TCCTTCTAAT TTTACGGAGC GTGCGCCTTG TCTTTCGCCT AAACGAAAAC 
GACCGGGACG CCCACGCAAA TATCCCCGTC CGCTAGATGT TTCCATTTCA AATCCCAAAA 
GAATAAGTTC GCCAGCGAAA AGCAAACGGG AACGACCACA ACCAATAATG GATGCTCCCG 
TCTTTTCTCC ACCGCCAATT GAAGCCAAGC TTACGCTGCC TCCGTCAGCT AGCGTCATGC 
CTCCACTAAT TGGCAATAAA CGAAAGCGTG GGCGGCCTCC TAAATCAGGA AAGACAACTC 
CTATTCCCCA CGTTTCAACA TCGCATCCGA TCAGGCAGGA TCCTTCTGTA GAATTTGAAA 
TTGTAAAGCG GACACGACGG GGTCGACCAC CCAAGAATCT TAAACCTGAC TTCATTGAAG 
AAAGCACTGA TAAGCCAACT CTCACCAATA CAAATGATCT GGGAAATCAG TTTGAATCTG 
AGCAAGCTAG ATCATCGATG GAGGACGAGT TGCATGCAAT GCCGGCGGAC AAGATCAAAG 
GGCTTGTTCA CAGTATGCCA ACTCACAAAA ACAAAATTCC AAAGGGAGTG CACCAGCACA 
AAGACTCCGA GGAATGGAAC AAGAGAAGCC AAGATGGGGC AAAGATTGAA TGCGATCCTT 
TTGAAAGTAT TCGAACTAAT TCCACGAGAT CAATAGTAGA GTCTGCGATA GACGCCACGG 
ATAACAGAAT TCTTCCGATG GAGCAAGCGA CTTCATCCTC AACACCAACA CGACCTCTCA 
GTAGGCGCCC ACGTCGCACA CTTGGTGTCA CTCCGCAGCA GTTGGAAGAC ACGGGGAGTG 
CGTTTGATGT CGTTAAGCGC CGCCGACGCA TCCTTGCCAC CACCTACGGA ACTGAAGAGA 
GTAAAAGCAC GGACACCACG CAAGCTACCC GTCAATCATC TGAGCTGAGA AACGGCGACG 
ACAAAGATCT CGATAACGAC GACGATCTTC CCATTGCTAA GCTGGTCGAA CGTCGGCGAA 
GGTTTTTTGA TCGGTAATCA ACATTTGGAA AGGAAAAGGA TTTTGAGTTC AAATCTTGGT 
AAGGCGATAG ACACGGAAAC GGGGGGATGA CGAAAGCAGC ATAGCTATCT AACAGTAACC 
AGAACATTCC TTTTGCGGGC ATTTGTA 

 

Protein sequence

MSRGRSVATN GDDGHPLYQS RPVSTPEKGA RMATFPSCGT TKQPSKTATS YQHKADRYAN 
LEEMGMGSIG KRPKHGESQV DEADVESDPL EQTAAALASI NMARYQDSNS FLESQHQSLG 
EVFENPTAAT HRAISEASHA VQPSSTRSSK ARPSEESVSV PPPLYHQKKH GKHVPAKFRG 
TKKGGNMASQ AGTVNSSKKR KLKRRTSNIS AQREKRKSAG GSSISNTSRT VPVQDDAPDR 
IVNPLLELVA APNSQPSAAD MIPLYDVWFP RPDTYSVAYA ARLLGFDVPV VAPSTAVVTL 
TTSWPLLRNY SSTLSIPDSG RTLPALWEQY QQGSCENDPI WQESTVDPLY VSLIRQPELG 
RLLVTPAQQS RLLSSLTDEI MLPVLDLAKS KGGGSEWTWS SLADFHERNP EKSWPSSLDT 
ISSGIYVLSD NLPIGLVSYR FEWHPLSHDT SEVILSLDGL STADDISYIG QNATTHHVPE 
SETRLLLVTL ICLALEHARA SHVWYATITV PHQLRDFFVR YFRMVPIEAA KDCSLEGKAR 
NTTTTAAKDS RQTRTSAGHG QFPENDDKCN VGPRNSIADM DSGKEVPGDK IGLLVARCSM 
SENVMPSADS KHAKMDFAVF SATTSSGLLQ HKSINNTWTG NGIQEPDGNA TSALETDDLK 
SSLKSEIKSL QKDKTLERQD VDIVGLVCDL NRCSYRYAFL MLTEAQEARD SASNYHTQHE 
ASQKQRWLVQ MPSVDEARAT HQNAEAPSTC GSTIRTKRAP TRKSVHFFTN PESIVRDVSV 
RFRGKVKDEN KIEFFHLEFD GELGPKIIAS RVNDGTKLDV MRAFSPPSSI RTDTCTEDDE 
ILRHLLSKKK QLEEFEGNFE PALRSILRKI VEERTVYESP ETVEQRNEEK NILYENKRML 
QRRKEMDKAV EKQREQDMDA VCDICNDGEV TPDNQILFCE ACNVAVHQFC YGIERIPAGD 
YYCLACRYLG RDKLDSAPAP LPIRCELCCK KEGAYIRTAA KSDDVSLATF GKWVHMVCAK 
WQGLNFVDES SPDLIEDVSE LKLGFRQLNI SCYLCLAERG AMNVCRHAGC KRWIHVTCAR 
AVGTCNVVHG ENVKGPVEVN PWTLLCPEHS SVPVSEIPKH SLSTETLISI AQEFPIEPKP 
APAPIALIPF NTANEIERKA LLANKAYEAE LLVEITMKKL SGVRCEGNYK CPRCIFVETA 
IKEGRGFTTP SCIACYQQGG WLRASHARPV SKKSYWKHNP REFEKSLFGR QLWCHTLCAF 
WHKQLILSPK TGEIDLSDVV MSSGRGLIKG NTFCFLCGQS GGLKLQCDNE GCHTEKNNRK 
SHTCFHVTCA RQAGLEVEAY DIGRKMHFYV KCYRHGGNEF NLRARLEDMI EKEKRRAGKT 
FARVDSPMTF AHASRLLNSA ILVLRIFGWA WRWAEWWVDY DSSWEPLLEP GEVESDMTKE 
ELKIVTSSRD SRCEDARQCR LAAFGAALRN RCYDTEDDFD REALDRALRA VLSTPSLVGP 
LEDFEKEFFV DWLGRAYRSK SRILGFGEDK ISVSSSRFCA HIDGGTPKHE LGTRPTPGTQ 
SLQKGKCFEE YVEETDDFLK TSVMVDDIRS CPRRDRAATS ESSPVANPSV KVGEPSILSK 
KRPGRPPSVD PSNFTERAPC LSPKRKRPGR PRKYPRPLDV SISNPKRISS PAKSKRERPQ 
PIMDAPVFSP PPIEAKLTLP PSASVMPPLI GNKRKRGRPP KSGKTTPIPH VSTSHPIRQD 
PSVEFEIVKR TRRGRPPKNL KPDFIEESTD KPTLTNTNDL GNQFESEQAR SSMEDELHAM 
PADKIKGLVH SMPTHKNKIP KGVHQHKDSE EWNKRSQDGA KIECDPFESI RTNSTRSIVE 
SAIDATDNRI LPMEQATSSS TPTRPLSRRP RRTLGVTPQQ LEDTGSAFDV VKRRRRILAT 
TYGTEESKST DTTQATRQSS ELRNGDDKDL DNDDDLPIAK LVERRRRFFD R