Gene PHATRDRAFT_44890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44890 
Symbol 
ID7199594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp557611 
End bp558484 
Gene Length874 bp 
Protein Length239 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178803 
Protein GI219116016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCCTCTG TCTAAATGCG TGGTGTTCCT TTTTTTATTA TTACCGGCTG TTTGGGATTG 
ATCTTGGCAT CTTTTCACAT AGCGCTCGCT TTCGTATCGA ACAGAAACAA ACATTCAAGT
TCCATCGTTA CGCTACGAAG GATGCCCAAC GACAATGAGC AATCCTTCTA ATAGGGATTC
CTCTTGGTTT GATAGAGACA ACGACGAGGA GGTTTCGATT TATCCTTCCG TCGTGGAGGT
GGAATCTATT TATATTCCTA GCTGTGACGA AGTTTTTGCA CGAGTTTCAT CCTTTACTAA
CTGTAAGGCG GGAATCTTCG ACGCCCACAG CGAAGATTTG AACCAATTAA GACGAACCTC
GTCATCCAAA GTCTTCCTTG GAGATAGCGT TATCTGCAAG GGAGGGCAAG CAAAGCCGCC
TCCGTCGTTT TCTGTGCAAA GCTCCGAGTC TGCTACGAGA AAACCGGGTT CAGTGGCTGT
AAGTGGAAGC GGCTCAGAAT TAGAAAGACA GTCAAGCTAC CGTAAAGCTG GCCAGCGACA
TCAGTCCATC CAAGAAGTCG AAATTAGTCC AGGTGTATTC TTGCCTCTAC ATGGATCAGA
AGAGACTATT CAAGAAATGG AGAGCGGTAG CCTGATTACG GCAATTTGTT TTTGCTGCGC
TCAAAGATTG AGCTGTGTTT CCTTAGCTAG CTATGTTTTG TGTCCTTGTT GCCGTGTGAT
CTCGCCGCTG GAAAGCAGTA ACAGTGGTGG CGTTGGTCTT GGACTTTTTG ATAAGAATAT
TGAATGTTGC GGTGGGTCAC AAGTTGTTCC TGAAGTATCT GACAGCGCTC ACGGTCGAGT
CGAAGACTAT GCTTGTAATG CATACGTGCA CTAA
 
Protein sequence
MSNPSNRDSS WFDRDNDEEV SIYPSVVEVE SIYIPSCDEV FARVSSFTNC KAGIFDAHSE 
DLNQLRRTSS SKVFLGDSVI CKGGQAKPPP SFSVQSSESA TRKPGSVAVS GSGSELERQS
SYRKAGQRHQ SIQEVEISPG VFLPLHGSEE TIQEMESGSL ITAICFCCAQ RLSCVSLASY
VLCPCCRVIS PLESSNSGGV GLGLFDKNIE CCGGSQVVPE VSDSAHGRVE DYACNAYVH