| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44884 |
|---|
| Symbol | |
|---|
| ID | 7199589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 537564 |
|---|
| End bp | 538711 |
|---|
| Gene Length | 1148 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | chitinase glycoside hydrolase family 1 |
|---|
| Protein accession | XP_002178798 |
|---|
| Protein GI | 219116006 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCAACGACA AACAAGGAGG TGTGCAGGCG GTTCAGACCA AGCTCAACCA TGACGACAAC
AGGTCTTGGC AGTGCTGGTT TGATCATCTT TACCTTTGTT GCGTTCCTCC TTTTGCTCTC
TTTTGTGCAG AGCAACAATA CTGATTTCGT GGTGGCCGGT TATTTACCGG ATTATCGCTT
CTACATCGAT CTTAATCAGA CTGTCCTCGA TTTGACAGAC TTGTTGCTCT TTTCCGTAGA
CGCCAAACCC AGTTTGCTAT CTGACAATTG CTGTCTCCAT GCGGATCACT TTAAAATAGT
CCAACAAGCG CGAGCGTTCA AACAAAAAGA GCAGTCGCGA GATTTGCGTG TTTGGTTGAC
GATAGGTGGG GCGGGACGGT CGTCAGGGTT TCCTGCCCTG TTTGGCGACA CCGAGCGCCA
AAAGACGTTT CTGCAGAAGC TGATTGATCT TGTAAAAGCA TACGATCTCT ATGGAATCGA
CTTTGATTGC GAACTACCAT TTTCGAAGCA AGAGTACTAC GACTATATGT TGTTCTTGCG
AGCTGCTTGT GACAAGCTCC ACGATGCAGG TGTCCACGTG AGTGTCGCCC TACATCCCCA
ACAAGCCTTG CCGAAGGCCA TCGCCACTTT GGTCGATCGC GTGCATCTCA TGGCGTACGA
TATGCTACGT CGTCAAGGAG CACAGCCGGA AGCACTGCAC CACGCGGAAC TCGACCAAGT
CCGCAAGGCG GTACACTTAC TCGTCGACAA CGATGCGCCG GGCGCCCGCA AAATCGTGTT
GGGAATTCCT GCCTACGGGC GACACGAAAG TAACCCTGAA CGGGTCAAAA CATTTGCCGA
AATTGTGGAC GAAATGGACG CGGTCCCGGA TACGCGCAAC TCCTGGCGGG GATTTAGATT
CGACGCACCT AAGGACGTCC GAACCAAAGT CGCATACGCT AGGGACGCCC AACTTGCTGG
CGTCTTTCTG TGGGAGTTGG GGCAAGACAA GGCTACCGTT GAGCATGCGC GTAGCGGCAT
TCTGTTGCGA GCGGCTGGCA GCGGAAAACT GTACACGGAT ACAGCAATCG AACCAGAATT
ATAGCAATGT CGCCTACTTC TCTGGGAACC CAAAAGTAGG GATGGTTTCT TGTTAGGCTA
ATTTTAAG
|
|---|
| Protein sequence | MTTTGLGSAG LIIFTFVAFL LLLSFVQSNN TDFVVAGYLP DYRFYIDLNQ TVLDLTDLLL
FSVDAKPSLL SDNCCLHADH FKIVQQARAF KQKEQSRDLR VWLTIGGAGR SSGFPALFGD
TERQKTFLQK LIDLVKAYDL YGIDFDCELP FSKQEYYDYM LFLRAACDKL HDAGVHVSVA
LHPQQALPKA IATLVDRVHL MAYDMLRRQG AQPEALHHAE LDQVRKAVHL LVDNDAPGAR
KIVLGIPAYG RHESNPERVK TFAEIVDEMD AVPDTRNSWR GFRFDAPKDV RTKVAYARDA
QLAGVFLWEL GQDKATVEHA RSGILLRAAG SGKLYTDTAI EPEL
|
|---|
| |