| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44880 |
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| Symbol | |
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| ID | 7199583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | + |
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| Start bp | 518741 |
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| End bp | 520961 |
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| Gene Length | 2221 bp |
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| Protein Length | 717 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178792 |
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| Protein GI | 219115994 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAAACACATT CTTGGTAATT GTAAAAGCCT TTCAATTCAC GACATGGACG CTTATCGAAT
CGACCAGATT AGCAGAGTCG AAGATATCCG TTCGCTGGTT GACCAACTAG AATCACTGCC
GTTTCTTTCA GCAGATGACA TCGGTCCTCT AGTCACTCCT CTGGTCCGAA TCACATCGGA
TGAAAAACGC TTTGGCGCAG AAGGTGCGCT TTTGACAGAG CGTATCGTCC TTAGTTGCCT
GAGCCGTATA CCAGATGATA TAAAGATCCG CTATGACCAC ACAAAATGTT GGCCCTTTCC
GACAGTCGGC ATGTGGAACC GTTCGATTAT TGCGTGGGGT AGCCAAAAGT CCGACGAGGC
GGCAAAGCGG GCGAACGCGA TGTTTTTGCT TGTTCAGGAT GACAACAATA AGGAACTTGC
CTGGCGCCGT GCTCGAAGCC TCCCAGAAGA TGAGCTCCTA TCAGCTACTC CTAATCGGCA
AACATACAAG TCACTTATTC GTGCATGGGC TGTTTCAAAT ACTTCAAAAG GACCGCCTCG
AGCATCCGAA GCGTTAAAAC AAATGGAGCT GTTTACCGGC GTTACGGCGC TCATACAGGG
TGAGGTTACT GATAAAACAG AGCTGAGTGA GATGGAGCTT CCAGATCGTA CATGCTACAA
TTCCGTTCTT TTGTCGTACG CCAAGCTTCC TGTTCTGAGG CAGCCAACGG CTTTGAAAAA
GATTCAACAA ATAGTCTCTA GAATGGACCG GGTCTATGAA GTCACGAAGA ATCCTGAGTT
TGCTCTTGAC GGGTTTTCCT ATCTAGCTCT TCTGTTGGCT TACCGGCGTT ACGTCCTATC
TTCCGATGAT CTAGAGCCGA GCTATCCTAC TAACATCTTA AATGTCTTAC GGAGAATGCA
TCTCAGCTCA TCCATGATTG AGAAAGATAT CGTTGACCTA CCTTGGGCGT ATTGTGTGGC
CATTGACGCC TTACTTAAAA CTCGTCGCCT GGCTGAAGCT CACGAGCTTG TCTTTGTGGC
GACTGGAAGA GCCACTTTGT CCGGATTTCC CCCTGTTACC TGCCTAGACG GAATATCCCA
CGTTACTCTA ATTCGAGTAA TTCAGGCGTG GGAAAATTCT CAACACAACG AAGCTGCGCA
GCGGATAGAA GACATTCAAG ACATATTGTC ATCGATACCA TTCCGACGAC CGTTCTTTTT
GCACAAAGCT ATGGTGGACA TAGTCGAGTC ACATTCTTCA TGGACCGGCA CGCCTCCGTT
GCTGGAGCAA ATGCTGCAAC GAGCTTTACA GACATCATGC TTTTGCCCAA ATGGGCAGTC
CTTTGCCCTG ACTATGAAAG CCTGGATGCG TTCCAAAGAC GTAGAAGCTC CTCATCGGGT
TGAATGCCTC TTTGATGCTC TAAATAATGC ATATACGAAG ACGAAGCTGG ACGAGTTTCG
CCCCCGAGAA GCACATTTGC GATTTGTTTT ATGTACATGG CTAACTCGAT CTGGAGACGG
TCGGCGGTAC AAGGGGAAGC ACGGCACGTT GTTCCCAGCC GAGCACATTT CTTCTATTTT
GAAAAGGTCG CACGATACCG CGTGGCTGAT TACACCCTCT CGAATGTACG CAATCGGACT
GGAAGCGTGG TACAAGCAGC ATATACCGTA CCCCGCAGCG AAAAGCTACA ATGCTGTTCA
TAAAGCAAGT ATTCTGTTGC GAGATCTACA GGAATTGACG GGCAAAATGC CCCCACAAGT
CTGCAATTGG ATGATTCAAG TTTGTAGCCG ACGCCAGCCA ACATCCAATC GCCGTGCAGA
CGCAGTTCAA ACCGCAAAGA ATGTGTTTCG GGACGGTGAA AAGAACTGGT ACACGTACGT
GGTCATGTCC CGTCTTTTGA AAAGCCGATC GTCGCCAGAT GTATTGTACT TGAAAAATAT
GTTTCACGAT TGCATCAGCC GAGCATTGTT GAGCCAAGCT TTTGTTTGGT ATCTTGTCGC
AACCGGAAAC ACGGAGCTTT TGCAGTCATG CTTCCGTCTG TCGGAGGAGG AGGCTTTACA
AGTGACTCGC CAGGTCGAGA ATAGCCTCGT ACACAATTCG GGGAAGTTTC ATTGGAAAGG
ACGGGCTCCC ACCGTGTTGC TGGTGGAAAA TATGCCTCCG GAATGGAGTC GTTTTGCCTT
TGCGGCAAAG AATACTGACC CTGATGACTG CAGTTAGAAA GCTAATAATG TGCTATCAAA
G
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| Protein sequence | MDAYRIDQIS RVEDIRSLVD QLESLPFLSA DDIGPLVTPL VRITSDEKRF GAEGALLTER
IVLSCLSRIP DDIKIRYDHT KCWPFPTVGM WNRSIIAWGS QKSDEAAKRA NAMFLLVQDD
NNKELAWRRA RSLPEDELLS ATPNRQTYKS LIRAWAVSNT SKGPPRASEA LKQMELFTGV
TALIQGEVTD KTELSEMELP DRTCYNSVLL SYAKLPVLRQ PTALKKIQQI VSRMDRVYEV
TKNPEFALDG FSYLALLLAY RRYVLSSDDL EPSYPTNILN VLRRMHLSSS MIEKDIVDLP
WAYCVAIDAL LKTRRLAEAH ELVFVATGRA TLSGFPPVTC LDGISHVTLI RVIQAWENSQ
HNEAAQRIED IQDILSSIPF RRPFFLHKAM VDIVESHSSW TGTPPLLEQM LQRALQTSCF
CPNGQSFALT MKAWMRSKDV EAPHRVECLF DALNNAYTKT KLDEFRPREA HLRFVLCTWL
TRSGDGRRYK GKHGTLFPAE HISSILKRSH DTAWLITPSR MYAIGLEAWY KQHIPYPAAK
SYNAVHKASI LLRDLQELTG KMPPQVCNWM IQVCSRRQPT SNRRADAVQT AKNVFRDGEK
NWYTYVVMSR LLKSRSSPDV LYLKNMFHDC ISRALLSQAF VWYLVATGNT ELLQSCFRLS
EEEALQVTRQ VENSLVHNSG KFHWKGRAPT VLLVENMPPE WSRFAFAAKN TDPDDCS
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