Gene PHATRDRAFT_44878 details

Gene Information

• Locus tag: PHATRDRAFT_44878
• ID: 7199804
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 505410
• End bp: 511399
• Gene Length: 5990 bp
• Protein Length: 1836 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002178789
• Protein GI: 219115988

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAAAATTAC AATTAGAATT CATCTACCGC TGCATTACCT GCAAGCTATC GGCTCTACGC 
TGATTAAGTG ATTCGGTGAT TCCGCGGAAT CGTTGTAACT AGCCAGTCTT GTGCTTTTTG 
TGGTTGGCGT CGCGGCTACA AACAGGGATT GCATCAAATT CTTTGTTTGA CGCCGGAGTG 
TATACAATTT AGAAAAGATC TTTCCTCTGG CCTTATCCAT AGAATGACTT CCGCCGGAGA 
TTCTGGGATG CGAAAAAACG ACAAGCCTTC GCTTCGTATG AATTTGTCGG CAGCGAATTT 
GTCCAAGACT GAAGTGGTTC CTTCGGTACC CGCTGCAAAG AAGCGAAGGT ATGCGCCAAT 
CGATCTCCCA CTCAGTATGG CTTCGGTATC AGATGTGCGA GTGTTGCATC AGAAAACTTC 
GATGAGTTTT GCCCTCCAAT CGAGTCTCAA CCGCGAGGAA GCTACCTGGC ATGCGCAGGG 
CACAACGACG CTCTTTCTTA CAACGCCGCA TCCACCAACC CAGCCACTTT CCGAGTCTTC 
AACAGTCCCC CTTGCTCTAC ATTTACGAGG TTCCTGCCAA GTGTCACAAG TACATGTTCA 
AACTCTAACT TGGACAAAAA ATCAGCCCGA GCCAAAGCCG CAGACTCTGC GGACTTCCTA 
TCATCACGTG GACCCGTTGC AGCACGTATT GGTCAAACCG CCATCGTCGT ACACTTTCGA 
AGAGGATCAC AAGAAAGAGT TTCGATTCGA TGCTGATGCT CAGTCCTCGC GTGGTGCCGT 
CGGTATGACG TCAGCTCTTC GGGCTGCGAG TGTTGCGAGT AATCTTGGAG AGCTGCGAAT 
CACGTTCGAG GCTTTGAATA GTAAAAGCGA GGAAACAACG ATAGATGCAG TCCAAAGTTC 
GTGGCGACAC CTATTGGAAG CTACCTCCAA TGAAGGGGAT GTTGTCCAAC GCCTGAAATC 
CAGCTGGAAT GGACGAGCTG GACAGCGTCG GAATCGCCGA TTGAACTTAA TAGCATCCTG 
TCTTGCTGCA GCATCGAATC AGAATCGTGC TTTTTGTGTT ACAGTCCGAT ACAACATTGC 
GATTGAAAAG TCAATCGCAC ATCTAGGTGG GCTCCACGCA TTGACAACGA ATCGCACGCC 
TCATGTCTAC ACGACGGCCG GAGTCTACGG TGACCACGAG GGAACCCGAT GTTGGCTACC 
CTGTGCAGAT TCAGCAGCTG CTCATCACCG CACCTCCCAC GAATTTCTTG TACATGTCAC 
CGCAGGTATG ACGCATGGCC TCGCGACGAT GGGGCTGGGA GAAGACATGG GCTGTAGAGA 
AACTCTCCTG CATGACAGCT TTACGAAGAC AGGGGCCAAA AGTATCCCGT CTCGAGCCGC 
AAATGAGTTT GGCGCACAGC ATGTGAAGTT TTTGGAAGAT CTCTCAGCCA AGAATACTGA 
CAACTCTATT TCTCACTGGA TTCCTCCGGA AGAGTCGCAT ACAGTAGCAA TGGGAGATAT 
TCAAGCGACG CATGTTTGGT GTTCTGGGAC TTGGACGCCT GTTCCTGCCA GATCACTGGG 
GTTTTCTATC GGCCCTTTCC GTGTTCTAGA AGATCCCGAG TACTTTGAGG CTGCGGCGGA 
AGCAGAAGTA GATGATGATG AAAAGGGTCC CGACGAACTG ATCGAGACAG CCCGCTCAAG 
CGGCGAAGGA ATTCGACAGG CTTACTTTTG CCCCGTATTC GCCCGGAAGT TTATTCATCG 
CGATGCAAGC CGTGTCTTGC TTCCGGAGAC TCAATTGGTG CTCGCCGACC TTTCATCCCG 
ACAACGCGAA ATTCTGAATC GATTGGACCA AAGTGTCTTA TCGACAACCG TGGGTGTTCC 
TCACCGAGCC TTGTCATTGA TGCGAGATGT GCTGGCCTTG CCGACCTACC GGACAGCCTC 
GTATACCCAA ATTTGGATTC CAAACGCCCT TCATGGGGGT GTGACCAGTG GATCATTTCA 
CTTCTGTCCC GAAGTGTTGG TCAATCCTTT TTTGGGTGGT GCCGTATTGG ACTCAAGGAT 
GCTGCCGCCC ACAGGATCTC GGCTACCGTT TTATCAAGGG GGGCGAGTAC TCCAATGTCT 
ACAGGCACGA TGTGCTATTC GCGGATGGAT TGTCGCAAGT TTACCTTTAG GAGGAAAAGA 
TGATGTTGGC GGGGGCTATA TTTTTGCCTT GGCTGAAAGC TTGCTGATGA GCCTTTACGA 
GCGTGGCAAT GGGGCTCATG GAGAAGGTAT GGCTTTGATC GCGTATTGGT ATTGTGTGAA 
ATTGACTGAT GACTTATCGT TCTTTTCGCG ATTACAGGTG GAGGGAAAGG CGGCGTATTT 
TTTAGTAACC GTTACTCATT TGGAAGCGGG TTAAACAGTT CAAACCTAGA CTTCCTTCCG 
GTTCAAAACA TCGAAGACAT GGATGTGGTC ATTTCTGGTG TTGGTGCTGT ACCAGTCGGT 
AAGCTTATTT CCTTCTAAAA TTGAATCGAC CAAACGCGAG TCTCACAGAA TACGAATTTG 
CTCTAGTGGA CGACCGACAA AACGATCAAC TTTGGAGATC CGCAACGAAC GGATCAGAGT 
CCCATACTTC ATCCACGGAT GAATTTAATG TGCGGCAACT TCTTTGCCGG GATGCGGTAG 
AAGCTTTGGA ACGTGGGACG GACAAAGACA AGGCGGTCCC GAGCCCTTCG ATGGGTTGGT 
TTGGGTCACA CTTGTCACTC TCGTTTCTTT CAAGCAATGC TGCTTCCAGT AGCGATTTAG 
GCTGTGGCGG TGTGGAGTTG CTGCATCCCA TCGGTGGGCT TGTGTACCGC GCTTTAAAAT 
GTGAAGTATT TCGAGGCATC GTCGAAGGCA GAGCTGGTAT CGCAAATTTT GTTCGGCTTA 
TACGTGCATC GTTCATCGCT GCACATTTAG AGGACCTCGG TGAAAGCGAG CTCAAGTTAG 
CAAAAAAACG TGAAAAAGAA GTAAAGGACA CTAACTCGAG CGTGGAAAAA GATGAAGTTG 
TACCAAAGGC GCCTTTCGTC GTTTGTGTGA ACGAAATTCT AAAAAAGAAA GGTTTGTCGC 
ACACTCTTTT TACTCGGGCC CTGCAAAACC TTTCTGGACG AGCGAAAGAA CCACATCTTC 
TTGGAACACT AGTGGATGTG GAGCGACACG CGGAAGACCC TCGCACTCGT CGACCATTCG 
TGGAACCAGA AGGTTTTCCC AATTCGTTCG TTAGAGGTGC CTCGCTTCTG TATTGTCGGG 
TTGGAGTGCA GGTGGAACAA GCTCGAGACA GCACTGGTAC CCAAGGACCA ACGGTCGGAA 
AAGGTATACA AATGCAGGCC TATGCCGAGC CTGTTATTCC GGAAGGTGGA TTAGCATTCA 
GTGGTCCCAT CACTGTCCGT GTTATTGAGA ACGAAGGGCA ATTTCGTGAA TATGTTAAAG 
ATATTGTGGC CGATGGTAGT CGACGCGATT GGGGAACCAC ATTTCTGCAT GCGAAGCCTG 
TAACGACGGT AAAGGCGCAG ACCGCGGCAA GTGGGACGAT CGAAGCATCG AGCAGAACTT 
CGAAAGAAGG ATCAAAGTCG TTGGGTTCCG TTAGCAGCAG TATCTTTACA GACTCCTTTT 
TTCACAGCGG TGGATATCAG GCGATCGAGT TGATACGTTT GACAAATCTT TCACCCCTCT 
TGTGGGTTCG GGTAGATCCA ATGGGTTTGT ACGCTGGACG TATATCTGTC TGTCAGCCAG 
ATGCTTGTTT AGCCGAGCAG CTTTTCCATG ACGGCGATGC TGCTGCTCAG GTGGAAGCGA 
TTCGTACACT CGCCGAGCGG CCAATCCGAA TTCAGCCATC ATCCAAGGTG AATGCTGTCT 
ACGACGTTAG TGTTATGGAG CTACCGGTTC GAGTTCTTGG TGATTGTTTG CGCGGATCTC 
CAGCTCTACA CAGCTCGCTT CCTCACACAC CTGCAATACG GAGCCAAGCC GCCCTAGCAA 
TTGCACAATG GCAAAACAAC AAGGCTCCAC CGTCAAAGGA TTCAGTGGAT GCAGACAGCT 
GGATAGGGAT CAATTTACTA TTGCACTACT TCCGTGAGCG GTTCTACAGC AACTCAATCA 
TCATGCCAAC TAAGTTCTCT CGCCTCGCGT TGAAGAAAAG TGATGTTGAA ATGAATCAAG 
CTGCAGCTGC GAACGAGAGC GCGGGTGCGA ATCAACCTAC GTTTGACGAT GCCTACGAAT 
ACCTCGACAT ACTTGAAGCC GGAGAGGAGC GAGCGGCAGC CTTGGAAGAC GCCGATCAGG 
TTGAAATAGA GGAAGATGAA GAGTACAGGG TTCGATCAGC TGTTGTTACT GCGATTGCTT 
GTACCCGAGC TAAAGACGGT CTTACTCCGT CAATTGCGGT TGAATTCTTG GAGACAGTGC 
TGGAAGCAGA GGATGCATCA GTCGTTGGCC ATCTGATTTA TCCTGACGAA GAGTTGATGA 
TTGAAAAGAA TTTTCGAACG AAGAAGTACA AAACCGAGCT AAATGCGGAC GATATAGAGG 
TTTCTACCAG CAATTACATA TCCACTCCAT CTCTGTCCTT TGTCTCGAGT GCAATGATTG 
CCGATGCACT CCTTGCAATG TGCCACATCA ATGCTTCCCC TACTGTCTAC ACTGACCCAG 
CAACAGGGGG AAAAGTTGTT TCTTCTGGCC CTCATCCTGT ATCCAAGCTT ATTAAAATTG 
CAAGAGAATG GCTCGACTGG GAGAATTATA GGGAGAGCAT CCGGAATGAA CTAGCAATGG 
AAGACCGATC TGGCATTTCT GGAAACTGCT ACGACAATAT CGCAGCTTGC GCTGTTACTG 
CCCTTTCGAC GCTGGCGATT CTTCGTCAGA GCACAACAGA AGGTGAACGG ACCGTAAGCT 
CCCGTAATAT TGGGAACGGA GAGAAAAACT CAGAAAGAAA GACAGAGGAC ATCGCCACAG 
CAAAATTTTA CGTTGCCATG TTTGACGAGC ACCCAGTCCA CAATGACCCA ACTCGAGCTG 
CCTGTGCACA GGCGATGTCG TGCATATGCT GTGCCACGGA TAGGTTTGAG GATGAAAAGA 
AGCCTCCACT GGGTCTCCTC TCAGCTCTTG AGTTTCTTCT AGATCGAGTA CTAGGTGAGT 
CGATTTATCT GTTGGAGCGG TTTCAATAGC GGTTTGCAGA CCAATGAAGT TTATGTCGTT 
GGATGGCTCT TACATGATCT CTTACTTCCT GAACAAGACG ATGAGGTCTC ACCCTGTCTT 
AAACAGACGT TATGTTTAAT TATGATGGAT GCGTGTACCG GAAAAGTTTC GTCTATGCAG 
CGCGTAGGTG TAATTGGAGG TAGAAACGAT CTCTTCGTAA CGGCTGCCCG ATATTTCAAT 
GGGCCGTTGG GAGCAAGCCA AGGCAACGAC AATGGAAGTG CGCTTCTAAC TTCCGTCTCA 
CCGTCGTCCT CTCCAGCAGC GAGCGCAGTT AACGATGGTG CGCGGAGAGG TCTGCGTCTT 
TTGAGTCGGG CCGGCCATCC GAGAGAAGCG TTGGGAGAGG AGATTGTTGT AAGAGTTGCT 
CGCTTTGCCA CGCGACTTTG GCGAACAATC AATGGAGAGC CTGCTGAGGC ACTGACCAGC 
GGTATCGTCC GATTGGGTCC TTCCCTGGGC GTATGCGCCT ACGACGGCGC CTTGCGGTGC 
ACACTTTTGT CGTTGTGGCA GTGGATATGG CCGCGCGGCT GCTTCGCAGT CCTGCAGGTC 
CAGGCTTGGA AGGCACACGA AGGGACGGAC CGCTATTTTG GTCTCGGGGC ACATCACGTA 
ATGAAGATTA CCGAAGATGA GAAGGTTGCC GCCACAGAGG AGGAGGAAGC ATTGTCCGAG 
TTAAACAAGA TAGTCAGTAC TGAATTGGAC CGTCAAGCAT GGCGTGGTGA AATGTCTCGC 
AAGGCTTACG ACATCTATAA ATCTTCCAAA GGTACAGTCC ATGACGTTGG GGCCTCTGAA 
CAGGGCATCG GCCAACCTTT ACCTCCAATT CAAAGGGATG CTGCATTTAA 

 

Protein sequence

MTSAGDSGMR KNDKPSLRMN LSAANLSKTE VVPSVPAAKK RRYAPIDLPL SMASVSDVRV 
LHQKTSMSFA LQSSLNREEA TWHAQGTTTL FLTTPHPPTQ PLSESSTVPL ALHLRGSCQV 
SQVHVQTLTW TKNQPEPKPQ TLRTSYHHVD PLQHVLVKPP SSYTFEEDHK KEFRFDADAQ 
SSRGAVGMTS ALRAASVASN LGELRITFEA LNSKSEETTI DAVQSSWRHL LEATSNEGDV 
VQRLKSSWNG RAGQRRNRRL NLIASCLAAA SNQNRAFCVT VRYNIAIEKS IAHLGGLHAL 
TTNRTPHVYT TAGVYGDHEG TRCWLPCADS AAAHHRTSHE FLVHVTAGMT HGLATMGLGE 
DMGCRETLLH DSFTKTGAKS IPSRAANEFG AQHVKFLEDL SAKNTDNSIS HWIPPEESHT 
VAMGDIQATH VWCSGTWTPV PARSLGFSIG PFRVLEDPEY FEAAAEAEVD DDEKGPDELI 
ETARSSGEGI RQAYFCPVFA RKFIHRDASR VLLPETQLVL ADLSSRQREI LNRLDQSVLS 
TTVGVPHRAL SLMRDVLALP TYRTASYTQI WIPNALHGGV TSGSFHFCPE VLVNPFLGGA 
VLDSRMLPPT GSRLPFYQGG RVLQCLQARC AIRGWIVASL PLGGKDDVGG GYIFALAESL 
LMSLYERGNG AHGEGGGKGG VFFSNRYSFG SGLNSSNLDF LPVQNIEDMD VVISGVGAVP 
VEYEFALVDD RQNDQLWRSA TNGSESHTSS TDEFNVRQLL CRDAVEALER GTDKDKAVPS 
PSMGWFGSHL SLSFLSSNAA SSSDLGCGGV ELLHPIGGLV YRALKCEVFR GIVEGRAGIA 
NFVRLIRASF IAAHLEDLGE SELKLAKKRE KEVKDTNSSV EKDEVVPKAP FVVCVNEILK 
KKGLSHTLFT RALQNLSGRA KEPHLLGTLV DVERHAEDPR TRRPFVEPEG FPNSFVRGAS 
LLYCRVGVQV EQARDSTGTQ GPTVGKGIQM QAYAEPVIPE GGLAFSGPIT VRVIENEGQF 
REYVKDIVAD GSRRDWGTTF LHAKPVTTVK AQTAASGTIE ASSRTSKEGS KSLGSVSSSI 
FTDSFFHSGG YQAIELIRLT NLSPLLWVRV DPMGLYAGRI SVCQPDACLA EQLFHDGDAA 
AQVEAIRTLA ERPIRIQPSS KVNAVYDVSV MELPVRVLGD CLRGSPALHS SLPHTPAIRS 
QAALAIAQWQ NNKAPPSKDS VDADSWIGIN LLLHYFRERF YSNSIIMPTK FSRLALKKSD 
VEMNQAAAAN ESAGANQPTF DDAYEYLDIL EAGEERAAAL EDADQVEIEE DEEYRVRSAV 
VTAIACTRAK DGLTPSIAVE FLETVLEAED ASVVGHLIYP DEELMIEKNF RTKKYKTELN 
ADDIEVSTSN YISTPSLSFV SSAMIADALL AMCHINASPT VYTDPATGGK VVSSGPHPVS 
KLIKIAREWL DWENYRESIR NELAMEDRSG ISGNCYDNIA ACAVTALSTL AILRQSTTEG 
ERTVSSRNIG NGEKNSERKT EDIATAKFYV AMFDEHPVHN DPTRAACAQA MSCICCATDR 
FEDEKKPPLG LLSALEFLLD RVLDDEVSPC LKQTLCLIMM DACTGKVSSM QRVGVIGGRN 
DLFVTAARYF NGPLGASQGN DNGSALLTSV SPSSSPAASA VNDGARRGLR LLSRAGHPRE 
ALGEEIVVRV ARFATRLWRT INGEPAEALT SGIVRLGPSL GVCAYDGALR CTLLSLWQWI 
WPRGCFAVLQ VQAWKAHEGT DRYFGLGAHH VMKITEDEKV AATEEEEALS ELNKIVSTEL 
DRQAWRGEMS RKAYDIYKSS KGHRPTFTSN SKGCCI