Gene PHATRDRAFT_44836 details

Gene Information

• Locus tag: PHATRDRAFT_44836
• ID: 7199554
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 369885
• End bp: 372220
• Gene Length: 2336 bp
• Protein Length: 494 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178989
• Protein GI: 219116388

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0506241
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGAGCC TATTAGTTTT GGTAATGTTC GCGCAGCTCT TCTGGTTCCA ACTATTTTGA 
ACGCTGAAAC CGTCGATTCC ATTCCAACGG TAGCACCTTT CACACGCTCA CTGTCTATGG 
AAGGCACAGA TACTTCCTTT AGAGATGATA CATCGGCACA GACGGGGAAT GGGTCCGCGT 
TCCCGTTGCC TCTCCCACCT CCTAGACAAA CTGCTGAACC CAGTACCAGA AATTCTTCTG 
TTGGGGAAGA AGACAGCTCA CGTCCTGATT GGCTTCGAGA TTCTCCTGAG CAGCTTCCTT 
TGGGGAGCGA AACGGTACAA AGAGAAGCTT CGAACGCCAG TGGCAGAAGT GCCGGCAGTA 
CAGGGAATCA GATAGTCCAG AGGACGTCCT CACAACTACA AGTGGTAATG TCATATGGCG 
CATAGCATCA GAATATCCCC TTACTCTACC ACCGAACTCA CTGAAGTTTT TTTAATTGTC 
GAAAAGCTTT CCAGCAGCAT AGCTCGCGGT ACTAACAAGG CCTTTGAGGC CTTGTTCGGT 
GATGCAAAAC CTCCGTTTGT CAGTCGAAGG CGTCTTGCTG ATGGGGAAGC TGCGAGGTAC 
ATCGTTTCCC GGACACTTCT TCCCGCTTCC GTTATCTTCA GCCAGCCCAC AAAAATGGTG 
CGTTCTCCAG CGCTCGTGTT GGATGCTCTA TCGTAGCTTC GTCTCGGGTT GCTAATACGT 
AGTTCGTTGT TCTTTTAAAA GTGGATCGCA ACTCTGCAGA CGAATCAAAA GGCTCTGGAT 
AGTAACGATG TCATGGAGGC GTCTAAATCT TTGCGGGCTT TTAGTTTGCC GTCCGAACGC 
CAGGCAAAAT GTTTGGCCCA AGCTTGGACG CCTCCGCGGA TGGAGCCGTT CGCCAACCAC 
CCACTGTGCA ATACCTGCCA GTCCAAGTTT GCTGTCTTCC GTCGAGCCTG TCACTGCCGA 
AATTGTGGTG TTTGCGTCTG CAAAGACTGT ACCGTGACTT GGCCGGCAAA GATGGTACCG 
GAGACTTACA ACATAAAGAA AACAGCGACA GTAAACATAT GCAAGGCCTG TGATTGGCTT 
TGCAACAGCT TTCGTCTTGC TCTTTTGGAT GGTGACCAGG ACAAGGCAGT TGCTCTTTAC 
GCTACTGGGA ACATCAACAT CGTGTGCCCT TTTGGAAACG TACGTAGTCA GCCTACGGAA 
TCCGGCTGCA TTGCAGTGCC ACCACTCATT TTCATTTCTT CTAGGTCAAA GGAGAGTTGT 
TCTACCCTGT TCACGCATGC GTTCTCGGTG AGTCACTTTC GATCTTGCGA TGGTTAGTCG 
ACGAGAATTG CTGCCCCATA AAATCCGTTC GAGTCAATGG AAGGACGAAG GATGGAATCT 
GTAACTATAC GGCAATTGTG ACATCAAAGG GCCGGTCGTT GCTGGGAATC GCAATGGAAA 
ACAACTTGAT ACCAATCGTT CGATATCTGG TTGTAGAGAA GGGCCTCTCT TTGGCAGAGG 
AGAAGTCCCT AACCCGCGAA ACGCTTGTCC AAAACCTTCA GCTTGCTCTA AGGGCCATAC 
CAAACGCCAC AACATCAACC GAGGCCATCG AAATGGATGT GTCGGAAGCA TTGTATCACG 
ACGCCACAGT CAATGACAGC GCCGAGGCGG ATTTGGGGGA CACGACGAGC CCGCTTTCTT 
CAGAGTATCA AAACGTTGTA CCAGTGCCTA TTCCTGACCG CGAACAGGGT AGCGAGAGAG 
ATTTGCCAGG TGGGCGTACT CTAAGTGAAG AAGCTCGCAA TTTCGGAGCA ATTAGCCGAC 
CCGGTAGAGG TTCTTTTTCG TACGATGGTC GGCAGGATGA AAATGAATGT AGGTGTACTT 
ACTGAAACCC GTCTTAGCCT CAGAAGATTC TCATTTATCC AACTTGTTTG TCCACAGGTA 
TCATTTGCTT TGACGCCAAT ATCGAGTACG TCCTTCACTC TCGCCTGAAT ATGTTCGTCT 
CTACCTAGCG AGACTTCGTT GCTCACCTTT AATTGTTACT CTTCGCTCTG AAGTTGCGTG 
GCTACCCCTT GCGGTCATCA AGTCTGTTGT CTGGACTGCA GCGAGCACTT GTCCCGTTGT 
CCAGTTTGCG CCATGCCGAC CTCCTTCATG CGAGTATTTA AAGTATGAAA AGAAGAAATT 
AAGACCGAAG GTACGCTTGC ACTTCGTGTT GTTGGCCATG CCATACCGAA ACGACCCCAT 
CAGCAAAAAC ACTTAGTTCA GAAGGATCTG TTGCGTATAG TTTTGTCACA CGTAAGGCTT 
TTATGTAGAT TTTTATGGTA GTGTATGAGC TTGTCTTTTG GTCTAGTAGT AAGTAG 

 

Protein sequence

MEGTDTSFRD DTSAQTGNGS AFPLPLPPPR QTAEPSTRNS SVGEEDSSRP DWLRDSPEQL 
PLGSETVQRE ASNASGRSAG STGNQIVQRT SSQLQVLSSS IARGTNKAFE ALFGDAKPPF 
VSRRRLADGE AARYIVSRTL LPASVIFSQP TKMTNQKALD SNDVMEASKS LRAFSLPSER 
QAKCLAQAWT PPRMEPFANH PLFRLALLDG DQDKAVALYA TGNINIVCPF GNVKGELFYP 
VHACVLGESL SILRWLVDEN CCPIKSVRVN GRTKDGICNY TAIVTSKGRS LLGIAMENNL 
IPIVRYLVVE KGLSLAEEKS LTRETLVQNL QLALRAIPNA TTSTEAIEMD VSEALYHDAT 
VNDSAEADLG DTTSPLSSEY QNVVPVPIPD REQGSERDLP GGRTLSEEAR NFGAISRPGR 
GSFSYDGRQD ENEFAWLPLA VIKSVVWTAA STCPVVQFAP CRPPSCEYLK YEKKKLRPKI 
FMVVYELVFW SSSK