| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44818 |
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| Symbol | |
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| ID | 7199542 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | - |
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| Start bp | 326096 |
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| End bp | 329251 |
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| Gene Length | 3156 bp |
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| Protein Length | 762 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178978 |
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| Protein GI | 219116366 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0143602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAGTTCTTC TTGCTTGGTG GGTTAACAAT GACCGTATTG GAACGCTGGC GTCGTCGAAA
AGATCAGAGG AAAACATCAC TTGGACGTCA GCCGTCGTTG CGTAAAGGCC GCAACGGCTG
GCCGCTTTTG AAGCGTAAAG AAGCCAGTTT TAGATTGACG GACTTCCGTG TGCGCAACCC
AATTGAACGT CACCTGCAAC AAGAATCAAT GGGGCGTTTC AATGTGGAAG CACTCGTTTT
GCGAGCAATC AAAGTGGAGG TGATTGATTT ACTTCGGGAT GCGGGTGGAT CTTGTACCGT
GCTGGCCATG GCGAACGCCG TTTCGGGAAG TCCGCGAGTC CAGGAATGCG TGGGGGATGC
AGCAGATTCC GAGAACGATG CTTGGGGATT GGCATTTTTG GACCTGATAC CGGGACGAGC
CGCGCGAAAG AAAAGCAACG CACGGTTGGC AAAGCGCTAC GAGTTTATCA ATGCCTTGCA
CAAATTAGAG GCTTCGCCGA GTTCCAGTGA AGCACGCATT TCAAGCTGGG AAGAGGCTTT
GGAAAGACTG CGAACGGTCT TAAATACTCA ATTTGCGGAG GCAGATGGAA GTGATGGCTT
GTCGATTCCC GACGATCTAT TAGAAGAGAG TATTGTCGAC AAATACTTGC TCCGCGCGCA
AGCTATTAAA CTGCAGCAAA TAGAGGAGCT AGAGCATTCC CAAAACCAGT GGTTACAAAT
TTCAAATGCT GCCCTTTCAC AGCGAATATC ACAAGTCGAC GCCAATCAGT TGGATGAAGC
GGACCGATTA ATGAGAGCTC GCTTGGACGC CGAGTATGAA AAGCGGGAGA AACGTCTACA
AAGTACGTCT CTGGCAGAAT TGGAGGCCAA GCTTATTCAA GAAGAGAGAA ATCGTGAAGC
GAGAGAACGA GCATTATCTC TGATGCGACC TTTGGAGGAT GCGGAACTTA AAATTGTACA
TGAGGCGATG AGTCATGTCG GGAATCCGAA CGAAATAGTT GCCCAAGCGG GCGTCGACTC
GGTTCAAAGG GAATCGTTTC AACGACTTGC ACCGGCACAA TGGCTCAATG ACGAGGTCAT
TCATTACTTT TATGTCATGC TAGCCAACCG GGACGAGGAA TTATGCAAGG CAGATCCCAA
CCGCAAGCGA TGTCATTTCT TCAAGTCGTT TTTCATCACG AAGCTTTTAG ACGAGGAACA
TTCCAATCCA TCACTCCGCG GTAAATACAA CTACAACAAC GTGAAACGAT GGTCCAAAAA
GGTTCCAGGT ACGTTATCAG AGAAAAGGGC CTTCTGTTTT GTTGTCTCTA TGTTCTTACA
AGGTATCGAC TGCCAGGCAA GGACATCTTC AATCTTGACA AAATCTTCTT TCCCATCAAT
GTCAGTCGGA TGCACTGGGT ATGCGCAGTT GTCTTTATGC AACAAAAGAA GGTTCAGTTC
TATGACTCCA TGGGGGATGG TGGTATGTAT CATTTAAAGG CAATTTTTCG CTACATCCAA
GACGAGCATC AAGCTAAGGA AGGTGCTCCG TTACCGGACG CCGATGCGTG GACACTTGTG
CCGTGCTTAT CGGATACACC ACGTCAAAAA AACGGTACGT AGGAAGTATA CGATGCGAGA
ACGGTTGGCT GAACGAGAAC TTTGTTTACC ATTGTTTTTG ACGAACCAGG TTACGACTGC
GGAGTGTTTG CGTGTATGTT TGCCGACTTT TTATCTAAAG ATTGCCCTTT GGTGTTCGAT
CAAAGTATGG TCAACCAATG CAGAAATCGT ATCGCACTCG CTCTCTTGAA CGGCAAAGCT
ATCCTGTAAA TGTACGATAT ATTCTTTCAC TAACATTTGA CATAGTATCA GATAGATTAC
TGTCTTGCGA TATTCTCGAG AAAGATGGAA TCACTGGGCA GAAATGTTTC AGGCTCCTCT
GTCAATTAGT TGGCACTGAC GCAATCAAGG AATTTCCAGT AGTGACAGCG CGTAGAGCCG
TTCGTGGGGA TAAAGCGTCG CGCTTCGAGA GGTTTAACGA TCTTACTTAT ATGGTAAATA
GCAGACGGAG ATGCCACTAT GAGTGTTTTT ATCAATTTCT ATGACCAGGA CCAATCAAAG
GAGCGTTTTT CTTTTGATAT TTCCCATGCG GACATCGAAG TTGCCAAGTG ATTGTTACTG
TTGGTAAATT GGGCACGCCG CGTCGCTTTC CATTGGCACA CGGACACGCC CGACAAGATG
GCACGGCGAA CCGCACCGTC CGTGAATGCG GTAGTTCACT GTCACCTCTT CTCGCTTATT
TCTGGAAAGT TCTCGCTCGG TACGTTCCGT CGTCACAAAA ACATACACGG CCGCTTACGG
TTGGTTTCAT TGCAAGGGGA AACAAACCTT GACACATCAC TCCAAAGAAG TTCTTTGACC
ACATACACTT TTCATTTGCT TATTAAGATG GTTTCTACTC GACGTTCCCA GCCCGTCAAG
GGACCCGCGT ACACTAACTG TGACAAGGAT GAGGTAAGCT TCAGCATCGG GATCCTGCGG
TCGTGTTGTT ATGCCGCCTC TGTGCGAGCG TCTCCGACAG CTCCCGATAG TACTTGAATA
CAATTCCTGT TGCTCACATA CTATATCCGC GATTCACATT AGCTTGCACG ATCCCAGGGA
ACCGAGGTTG ATACGTTCCC CAGCACAACT GTACGAAAGT CTGACCAGTC CCCCGGAACG
GCGGACTCGA CGATGCACTG GACAGGCGCC TTCCACGATG ACACCGCGAT TATCGCGAAA
CACGAGTTGG GACCGGATGT TGAGGACAGC GTCGTTGTCT CTCCAATGGA AAGCGATAGT
AGTACCACCA CCGCCGTTCA CACCAACACG AAGAAGAAAG TCAAGGCCGC GGCGCGCAAG
GCATCGGCGG CGACCGTCAA GCACGTCGCC ACCACGACGA TGTGTGCTCC AGCGAGTCCG
CCTGGGACCA CCAATCAGAC CAGAGCCGTC ACCCGCAGTA AAGGAGGCAG CGTGGATCTA
TTCAAGGGTA TTGAAAGTGT TCCCGTGGTA AAAAAGCCTT CTCCGAAAAA GCGAGGCGAC
GAGGGGGGTA ACATGCAGAA AATCAAACTT CTCACGGGGA CCCTGTACCT GTACCGGGGG
CGGTATCCAC GAGCCGAATT TGTGCGCACC AAGTGA
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| Protein sequence | MTVLERWRRR KDQRKTSLGR QPSLRKGRNG WPLLKRKEAS FRLTDFRVRN PIERHLQQES
MGRFNVEALV LRAIKVEVID LLRDAGGSCT VLAMANAVSG SPRVQECVGD AADSENDAWG
LAFLDLIPGR AARKKSNARL AKRYEFINAL HKLEASPSSS EARISSWEEA LERLRTVLNT
QFAEADGSDG LSIPDDLLEE SIVDKYLLRA QAIKLQQIEE LEHSQNQWLQ ISNAALSQRI
SQVDANQLDE ADRLMRARLD AEYEKREKRL QSTSLAELEA KLIQEERNRE ARERALSLMR
PLEDAELKIV HEAMSHVGNP NEIVAQAGVD SVQRESFQRL APAQWLNDEV IHYFYVMLAN
RDEELCKADP NRKRCHFFKS FFITKLLDEE HSNPSLRGKY NYNNVKRWSK KVPGKDIFNL
DKIFFPINVS RMHWVCAVVF MQQKKVQFYD SMGDGGMYHL KAIFRYIQDE HQAKEGAPLP
DADAWTLVPC LSDTPRQKNV IVTVGKLGTP RRFPLAHGHA RQDGTANRTV RECGSSLSPL
LAYFWKVLAR SSLTTYTFHL LIKMVSTRRS QPVKGPAYTN CDKDELARSQ GTEVDTFPST
TVRKSDQSPG TADSTMHWTG AFHDDTAIIA KHELGPDVED SVVVSPMESD SSTTTAVHTN
TKKKVKAAAR KASAATVKHV ATTTMCAPAS PPGTTNQTRA VTRSKGGSVD LFKGIESVPV
VKKPSPKKRG DEGGNMQKIK LLTGTLYLYR GRYPRAEFVR TK
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