Gene PHATRDRAFT_44799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44799 
Symbol 
ID7199754 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp274640 
End bp275943 
Gene Length1304 bp 
Protein Length374 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178966 
Protein GI219116342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCAG GCCGCAACGA CGACAGCCAT TCCGATCACC GTTCCGCTTC CACCAACACA 
TCTTCGAGCA AGCTCCAAAC AGATTGTGCC ACCGAACACG GAAACTCCTT GCAGTGCATT
CAGGATAATT TACACGACAA GAATGTATGT CAGCCCTTTT TCAAGGCTTA CAAGGAATGT
CGCGCCGAAG AAAACAGACG TCGGCTCGAA GCTAACGCGA AGAGGTTTTT CTGGCAGTAA
CATTCAGTCA CAACCCTTCT CGGCAATATT ACTTTGGAGT TGCGCTCTCG TGATTTGGTG
TTCTACGACG CGCACAGTAC AAGGCTTTGT TTCAATGAGG CAATCTATTG CCCCGTCTTT
TCCCTCTGTA CGACTGCATG ATATTGACAC CGGGCACGAC GACAGTATTG TAGGAGCACG
TTTCTTGCTT TCGTTTGATC TCGACGACAC TCTTTTTCCA ACGAGTCAGG TTGTGAACGA
AGCCAACACA GTCATGATTG CAGCCATGAA TGCCTTGGGG TACGCAATCT CGGTGGACGG
GTTTTTGGAA ACGACGCGGC GGATTCGAAA AAGACTGACC CAGCCCGTGA CTTATACCGT
CTTGCGCAAA ATGGCGATCC GGGAGGTTAT ACAGTGTCAA CTTTCTCAAG GCGATACGCG
AGGGCCAATA CTGATTGAGG AAAAAGCGAT AGACGAATTA TTCAACGTGT GGCTGGAGGA
ACGACACGCG GCAGCGGAAC GCTATCTATT TCCAGACGTA ATTCCTATGT TACAATCGGT
TCGGGCACGT TTTCCAGGTG TCTGCATTGC CGCCATTACA AATGGTCGGG GCGATCCACT
AGCAATGAAG GATACACTGG CCCCCTATTT TGAGTTTTGC GTTAGTGGAG AAGATAGCAA
CGTGTTTCCT GATCGCAAAC CCCATTTAGG AATTTACGAA GCGGCGTTGG CACTCTACAA
TGCAACATTC CGGGATCAAT CGTCAGAGGA GCTCTTGTGG TGTCACGTGG GCGATTGCTT
GGCTAATGAT GTGGGAGCCA GCGCCGGGTG TGGCGCCTTT GCAGTATGGT TTTGTCCGGA
CGATCAAACC ATTGAATCTG CCGCTTCTCG TTTGAAGGAC ATACGGAGCA TGCCGTCCTG
GTCCACGGCA TCCGCAGCTG ATATAGTTGA AAGAGCGAAA ATGGCCGAAC ATGCCAAGGA
AAAGGTTGCC ACTCGAATTC GTTCGCTATC GGAGCTCGAC GAAACGTTGC TCAAATTCGT
AGAACGTTCC CACTCTCTTG CTTCCGCTAC GTAAAGAAAA AAAG
 
Protein sequence
MPPGRNDDSH SDHRSASTNT SSSKLQTDCA TEHGNSLQCI QDNLHDKNVL QGFVSMRQSI 
APSFPSVRLH DIDTGHDDSI VGARFLLSFD LDDTLFPTSQ VVNEANTVMI AAMNALGYAI
SVDGFLETTR RIRKRLTQPV TYTVLRKMAI REVIQCQLSQ GDTRGPILIE EKAIDELFNV
WLEERHAAAE RYLFPDVIPM LQSVRARFPG VCIAAITNGR GDPLAMKDTL APYFEFCVSG
EDSNVFPDRK PHLGIYEAAL ALYNATFRDQ SSEELLWCHV GDCLANDVGA SAGCGAFAVW
FCPDDQTIES AASRLKDIRS MPSWSTASAA DIVERAKMAE HAKEKVATRI RSLSELDETL
LKFVERSHSL ASAT