Gene PHATRDRAFT_44790 details

Gene Information

• Locus tag: PHATRDRAFT_44790
• ID: 7199899
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 254916
• End bp: 256969
• Gene Length: 2054 bp
• Protein Length: 586 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002178736
• Protein GI: 219115882

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.194611
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGGCCGCAA AGACAACGCC CTGCGAGCGA GAAAAGTCGT CTTTGTTCGG ATGGCGTCAG 
AACCATGCCT ATTTGGAACT GGAAAACGTT TATTCTGCTT TGCGCTTTTC GCATCGCGAA 
TACTTTTCTT GTGAACTCTT ACTTCGACCC AGATGAATTC TGGCAGATTA TGGAGCCAGC 
TTACTGCAGA GTATACAATG TCAAATCCCT TTGCCCTGGC CTTACTTGGG AATGGAAAAG 
ACGTGCTCCA GAGTCGGCAA TAAACTTTCT TGATCGCAGT ATGCAAGGTC CAGCGCGAGC 
ATATCTATCA GTGCTGCCGA CGTATATTTA CTTTTTTATT CTGAAAGCGT CGGGGATGGA 
TTCTTACTGG CTCATTTCGC GAGGACCAAT GGTTTTATTT GCTGTAACGG TTGCAGCACC 
AATTGATATG GCGGTGTATT ACGCCGCTGG TTGGCTGGAA CCAATAAAAG GTTCCAACCA 
GAGCGGTGTT GCTGCATGGT GCCTCTTCTG TAGTCTCTGC TCTTGGTTCA ATGGATACAC 
GCTTGTCAGG ACTTTCGCCA ATAACCAAGA AGCTGAGTCT GTTATTCTGG CGATTGCTCT 
GGTCGCTCCG GAATTGATTG GTAATCGCTC GGCGAGGTAC GCTCTTTTAC GCAGCTGCAT 
GGCATTTCTA ATTGGAGGAT TTGGTGTTGG TATACGCTTC ACTTCGATAG CCGCATTTAT 
ACCAATGGGT GTTTTATTAG CGTTGAGGCA CCTTACCTTG TTGAAAAGAG TTTGCTATCT 
ACTGGTACCT TGCGCTTTCT TCGGATTGGC TGGCTTGAGC TTCGGAATGC TTGTCGATCG 
TTACTTCTTT GGTTTTTGGA CGCTCCCTTT TCTGGGGAAT TTTCATTTCA ACGTTGTTCT 
CGACTACGCC AGCCTCTATG GTTCACATCC CATGCACTGG TATTTTACCA TTGGAGTTCC 
CGCGCTTGCG GGTTTACTTC TGCCTTTTCT TTGTTTTGAC TTTTGGGAAC TTACCAATGG 
ACGATCCTCG TACGGAAAGC AAAACTTATG GATTATCGTT TTGAGCTATG TCGGGATTAT 
GTCATTCAAT GACCACAAGG AATTTCGCTA CATTCTTCCC GTTCTTCCTC TCTTTTGTCT 
ACTGGTTGGC TCCCATGTCC AAGCCCTACT TTCAGGATCG ACCTGGCGGG CTAGATTTCT 
TCGCTTGACA TTTGTTGGTG CAAACCTAAT CACTCTCGTG TACCTTGGGA TGTTCCACCA 
GAGTGGCCCG ATTCTCGTGA ATCAAAAGAT AGTTGAACTC GTACGCAAAA GCCAGGAAAC 
GACTGATGTT TCGATCCATT ACCTGACTGG GGCCTGTCAT TCGACTCCAC TTCATAGCAG 
CCTTCACGTA CCACCATTTC AATTCCGCAC TTGGTCATTG GACTGTTCTC CAGACTGCCG 
GGCAGGTCTC AACCGTGTCT GCGAGACAGA AGAGTTTGTA GACAATCCTG CAGCCTTTGT 
TGACAAAGCA TATTTTCCTT GCCTGAATGA TGAAAATCTT TGTACCGCCA ATGCTACTCG 
AAATGGTACT CCTGATTTTG TCGTGACTTT CTCGTCCTTT GTCCGGGACA TTAGTGCTCC 
GCTGCATCTT TTGGGGCTTC AAGAAGTTGC GCGCTTTCCC GATCACATCA ACGGGGCTCG 
ATTTGGTAAC TGGACGCTGG GAAGTGACTT TCTCGCGCCA AACTATCGAC ATTTCATGAT 
TGCTGGCGGG ATGGAAATCA GTCTTGAGGA AATGGTTTTG TTTGCGCGTC CATGTTATAT 
AGACGACGCC ATAAAATGTG AATAAAAGGC CTTCAATAAT GAATCCTGAA ATCTGATATG 
CTTGGCAGCT CGAGTTTTTT GTGGCCGTGC TTGAATCCGA ATTTCTTTTA AGTTTGACAG 
TGAGTCGCAA CCCGCTCATG AACATCGATG AAAACAATGT GCACTGGGAC AGAAGCTGCT 
CTTTCAAACA AGTCCATGGA ATCAATCTCT CTTGAAGGTC AAGTAGATTA ATCTAGAACA 
TGATTTACCA AGTC 

 

Protein sequence

MPIWNWKTFI LLCAFRIANT FLVNSYFDPD EFWQIMEPAY CRVYNVKSLC PGLTWEWKRR 
APESAINFLD RSMQGPARAY LSVLPTYIYF FILKASGMDS YWLISRGPMV LFAVTVAAPI 
DMAVYYAAGW LEPIKGSNQS GVAAWCLFCS LCSWFNGYTL VRTFANNQEA ESVILAIALV 
APELIGNRSA RYALLRSCMA FLIGGFGVGI RFTSIAAFIP MGVLLALRHL TLLKRVCYLL 
VPCAFFGLAG LSFGMLVDRY FFGFWTLPFL GNFHFNVVLD YASLYGSHPM HWYFTIGVPA 
LAGLLLPFLC FDFWELTNGR SSYGKQNLWI IVLSYVGIMS FNDHKEFRYI LPVLPLFCLL 
VGSHVQALLS GSTWRARFLR LTFVGANLIT LVYLGMFHQS GPILVNQKIV ELVRKSQETT 
DVSIHYLTGA CHSTPLHSSL HVPPFQFRTW SLDCSPDCRA GLNRVCETEE FVDNPAAFVD 
KAYFPCLNDE NLCTANATRN GTPDFVVTFS SFVRDISAPL HLLGLQEVAR FPDHINGARF 
GNWTLGSDFL APNYRHFMIA GGMEISLEEM VLFARPCYID DAIKCE