Gene PHATRDRAFT_44747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44747 
Symbol 
ID7199722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp120974 
End bp122230 
Gene Length1257 bp 
Protein Length362 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178707 
Protein GI219115824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0219967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTGTTCCG ACCTACCAAC TGTAGGCCTA TTCGCTGTAT TGCCAGAATA TATAACCTAC 
CGAGGCCACC AAGGACGCTT GCGATTCACC CTTTCCTCTC GTTGACGCTC ACACGGTGCC
CTCTTACCTG TTACCAATTG TCGATCATTC CTTTCACTGT CCACACTCAT GAATAGCACG
CTAGCGGTGA CTCCCCACGG AGCCGTCACG GAGAACGCCA CGACAACGCA ATCTGCAGAG
ACGGGAAAAG CCGTAACGTC CTCGACGATG GCGACGGACG CGGCGTCGAC GCAGAGCGGT
TTACAACACG ATTCACGATT CAGTTGCAAT ATTTGTTTAG AAGCCGTCAC GGCACCCGTC
GTGACACAGT GCGGACATTT GTACTGTTGG AGTTGTCTGT ACCGATGGCT CGAGCCAGGA
ATGGTTCCGG GAGAACGACA AGCACTCACG GGAATGGTCC GGTACGGACC CATCGACGAA
ACGCGACGTG TGTGTCCGGT GTGCAAAGCG CCCTGTTCCG TTCCCACCAT TGTTCCCATT
TACGTGCGCA ACGAACCCAC TAGTCCCAAC AAACGAACAT CGAGCTTGGC GGATTCCTTG
GACGACACTG ACGACGACGA TGTCGAGTAC GATCATCAAC GAGAGGCCTC GTACGGAGAA
CAGGCCCACG TGGCGGCGCA CCACACTGAT ATTGTGCGTG CAGCCAATTC CTGGGAAACG
TCCGTGACGG AACATGCGGA CCTCGATGGA CCTACAAGTC CACTGCCACC ATCCGTGGTC
AACGTGACTG CCTCATCCGC ACCCGATTCC TCCTTCACAA ACACTGGACT CCGGCAACGG
TTGCGGTTTC GCAGTCGCGA CAGTGAAATC CCCTCCGCCG AAGACTATCA CGTGGTCCCA
GCCCGTCCAG CCGCCAACTC CCCGGTTCGC CATCGCAGTC TTTCCGAATC TAACGTCGGC
GCGGCATCCC TCCCCCGCAA CCCCGCATGG TTGACCCCTC TCAATCCTGC TACCAACCGG
GCTTCTCTCA GCAACGGACT CGCCTTGTCG CTCCAGCACG CCTTTCGACA ATCTCTTCCA
ACGACTGCTG CGGCACAGCC CGATCAGAGC ATTCCCCCAC TCCATCGCAG AGAAGGACAC
GGCAGTGCCG CCGTCATGAA CAGCATTTCG GAACAAGATC CCAACGCCAC CGAATTCTTG
TCCAGAATTC TATTGTTACT CGGTTCGTTC GTGATCCTGT GTTTGTTGTT GTTTTGA
 
Protein sequence
MNSTLAVTPH GAVTENATTT QSAETGKAVT SSTMATDAAS TQSGLQHDSR FSCNICLEAV 
TAPVVTQCGH LYCWSCLYRW LEPGMVPGER QALTGMVRYG PIDETRRVCP VCKAPCSVPT
IVPIYVRNEP TSPNKRTSSL ADSLDDTDDD DVEYDHQREA SYGEQAHVAA HHTDIVRAAN
SWETSVTEHA DLDGPTSPLP PSVVNVTASS APDSSFTNTG LRQRLRFRSR DSEIPSAEDY
HVVPARPAAN SPVRHRSLSE SNVGAASLPR NPAWLTPLNP ATNRASLSNG LALSLQHAFR
QSLPTTAAAQ PDQSIPPLHR REGHGSAAVM NSISEQDPNA TEFLSRILLL LGSFVILCLL
LF