Gene PHATRDRAFT_44745 details

Gene Information

• Locus tag: PHATRDRAFT_44745
• ID: 7199869
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 113695
• End bp: 117336
• Gene Length: 3642 bp
• Protein Length: 1075 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002178932
• Protein GI: 219116274

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.362492
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACATTACTTC AGTTTCGTCG AACGACTTTG CGCGAGTATG AAGTCCTTTT TGTTGAAGCA 
GCAGTTTCCG GACCACGATA AGGCACTACG GCACGCGGAG GATTCCTTGG AAGCCTTCGA 
ATCCAAGAGC AATCACGGCG TTCCGGACAC TCTCGTTCGA CAAGCTTGCG CTTGTCCCCA 
TCTGCGGGAA GTGCTCCCTG ATGCGCTACA GCTCGATTAC GTGGAAACAT CCACGGGCAA 
TTTTGTACTG GCGAATCCGG TACACAGTTT GCATCTAACA GCGCATCTGG ATGCCGCCTG 
GCTCAAGGCT CTGAAAGAGG AGCCCATCAT GTACGGGGAA GAACAAGAAC GGATGATGGC 
TGTGCGCACA CCCGGACTCG CCGAGACCTT TCATCCGTGG CTCAAATCGC AGACACTGAT 
TCCGTTTCAG CGGACCAGAG TGGAAAGCGA AACGGACTCG GTCAAAGCAT CAGCATCAGT 
GGAACCCCCT CCTCACTCAT CCAATAAGGA CGACCTGGAA AAGGCAAAGG TTCCCATAGC 
AGCGGGAGTT CCTGTTCAGA AGTCTCTAGA TGCACAGTCT ACCGAAACGA CCGCTACCCT 
TGCAGATGTC ACTTCCTCCG GTGGCGATAG TATTTCCCGT ACGATGCTCC CTCCAGACTC 
CCTTACAAAA GAACTCTTGA AGAAGAGTGC GAGTGGTGCA GTGGAAGCGA AGGAGCTGTC 
TTTGTCGAAT CCTGAAACAA GTCTTTCCAA CGAAAAAAGT AAACTCCCTT TGGCAAGCGC 
TCCCTTGGTC AGTGAGACAG CCCAAGTCGC TATTCCTGCG TCCATCCCCT CGTCCGCAGG 
CAAATTACAG CCGCCGGTAA CCCAGGACTC AATCGCTTCG CCCTCGATGA CACATACTTC 
AAATACCGCG ACATCAATAC CCAAGCCTAT TTCGGTCAAG ACGGATCAGG GTCTCCCCTC 
GTTAGCGTCG CCGGCTCAGG ACGCCAATCA TTTAAGCGAT ACTCGGTTTT GGTCCCTCCA 
AGCACAAGAG GATCAAATCC GCATTCTGCA CCGCGCTCTG TTGTCGAAAC GCACAGCCGC 
ACTCGCCAAG AGCAAAACAT CCGCTTCCAT TTCCACTGCG GGCAGCCCGG CAACGAAAAA 
ACGCAAGGCC GAAAGCAAAG CCGTCAGTAT TTCGAGTCTA TCCGCTTGGA AGCACTACGA 
AAACAACGTA CCAACGGCGG TCCTGACGCC AGACGAGGAA GACGATTATC ACGACCAGAT 
GACGGCAGCT ACTCGAAAGG TGGAGAAGTG GATGGAACAC TACCGACTCG CTCGAGAAAG 
TTATTGGCAA ATGCGAAAGC AGTCGGGTAT GGGTATCGAA ACGTCACAGA CCAGGCCGTT 
TGGGGCAATG GATGATGATT CTGAAGCGGG AGTTGATACG GGAGGTCTCC TCTGTCGACA 
GTGCTTTTCG AACGAACCAT CTTGGATGCC ATCTCTTTCC GGAAAGCCCA AAATTCGGCA 
AATCTGTCGT GGTGACCAAT TGATGCGCTG TTTGGAATGC ACATTTGTCG GGTGTGGACC 
TTCTTCTACC GCACCCAGCT CAGAGCAGCA TATTCTTCGG CATTTTTTAC TTTCAAATCA 
CAAGCTTGGT AAGTTGTGTA CCACTGCTCT CCATGCAATT CCAGGTCTGC TTTTTCTGAT 
TCCAATTTGT TGAAACCAGG AGTCACGTGT GGTCGGGAGG CCCGCGTTTA CTGTTTGCAA 
TGCGGAGACT TTGTATACCA TGAGATTTTT GACCACGAAA GGGATCGTGT TGATCTGGCA 
ACGAAATTGC CGTGGCAAGC GTGGAAGCCA CATCCTGTCC AGCGGTCCTT CGACGCTCTC 
CAGTTTATGC GAATCCAGGA CCAGGGTATT TTCTGGCGAG GAATGATTGC CGCCTTCCCA 
CCTCTGGTCC CGATCGAACA TGTTCGTGCC GCTCAATTTT GTCGTCTTCG GCAAGTGTTG 
TTTAGCGGCG AATGGGATCT GTTACCGCTG ATGACGAGTA GCACAGCGAA GAGTTTTGCT 
CGCGCGCAAT GGGAGAAGCG TACGTCTTTC CTCCTGACTT TTCCTTTGAT GCAACGCTCC 
GTTGCTCACA TTGTCCATTC CCTATGTATA TAGCTATTTT CCAACGAGGG CGGATACTGG 
CTCCTGTTGG TATGTACAAC CTTGGAAACA CTTGCTATCA AAGTGCTGTG TTGCAATGCC 
TCGTGAATTG TGCACCAGTT CAAAAGTATT TCCTGGAACA AGTAGGCCAC CATCATAGTT 
CGTGCCAAAT GTACCGGAAG ACGGCAGGAC GATCTATGTC GTCAGCTTCT TCATCCAAGT 
CGAAGGCCCA CAGCGTCTGT CTTGCGTGTG AAATTGATAA AATTTTGCTT GATTACGTTG 
GTAGTAGTAT GGGGATTGAT GTACGGCAAG CATTGTTAGA CGTTTGCCTG CCGGAACGGC 
GAATCTTTTT GCAAGCGTCG ACGAAGAAAG CGAGTTCTAC TTTCAACACT CCCATAAAGC 
AAGGCGAGCC ACTGGCCCCG ACCGAGATGT TGGCAGCAAC TTGGGTGTGT AAAGGGATGG 
AGCATTTGGC GGGGTACGAG CAACGTGATG CACATGAGTT TCTACACGGC TTTCTCGAAG 
CTCTCGGCAA GCACACGCAA TTGTATCGAG AAAAGATGTA CAAAATGATC AGCACAGTTC 
AGCCGTCTAA CGCCCTCATG CCTTTGGAAA ATCCTATTGA GCACGGTGCG TTGCCCTAAA 
TTTCTTTTTG TGTTAGTCTT TCAATTCTGA CTTATTTCGC TTCACAGACT TTGTGAAGAA 
GACCTTTGAA GGCAAACTTC GGTCTGTCCT CATATGTCAG GAATGTGGAT CGAAGCGTAC 
TCAGCTAGAG TCTTTTCTGA GCATTTCCTT GCCTCTGTCT TCTGAGGTTC AGAGGGTTAC 
TACAGCTTTA CCTGGCGATT CAGACCCGTA CATTGCAAAT GGTAAGCTTT CGGTGGAGCG 
TTGCCTACGG CATTTCACTC TTCCAGAGTT GCTATCAGCT CCGATTGATT GCCCATCATG 
TAAAAAGAAA ACCCAGACGA AGAAGCAGCA CGTTGTGTCG AAGCTACCCA ACGTTCTCTG 
CCTACATTTA AAGAGATTCG ATGCTGCGCA AAATAAAAAA ATTGAAGACT TTGTCGCATT 
TCCGGCTCGA AACTTGAACA TGGGTCCCTA TCTTCCACAT TGGTACGTTG CCTAGGAACT 
ACTCCACTGC TTTAGAAATT CACTTACATC TGGACCGCGT ACACAGGTGC GAGGTCACCA 
GTGCTCCCGA GATAGGCGGC AACTCTCTTC AAAGTGCACA GGTAATGTAC AGTCTTTTCG 
CAACGGTCAA TCATTTCGGG AATTTACAAA GCGGTCACTG TAAGTCAACA AGTATCGCAG 
GAACGGCATT CCCCGCTTGA CCATGTTTCT CAACAGCTGT TACATTTACC TTCAAGATGT 
TGCTAATGTT AAGGTCAATG AAAAATGGTT TCATTGCAAC GATGCTCACG TAGCACAAGC 
TGGCATCGGA ATCGGTGAGA GAGAAGTGCT TCAAAGCAAC GCATATTTGC TGTTCTATAT 
TCGTTCGAAA TAATATATCA ACTCTTCGAA TATCTATTCC AA 

 

Protein sequence

MKSFLLKQQF PDHDKALRHA EDSLEAFESK SNHGVPDTLV RQACACPHLR EVLPDALQLD 
YVETSTGNFV LANPVHSLHL TAHLDAAWLK ALKEEPIMYG EEQERMMAVR TPGLAETFHP 
WLKSQTLIPF QRTRVESETD SVKASASVEP PPHSSNKDDL EKAKVPIAAG VPVQKSLDAQ 
STETTATLAD VTSSGGDSIS RTMLPPDSLT KELLKKSASG AVEAKELSLS NPETSLSNEK 
SKLPLASAPL VSETAQVAIP ASIPSSAGKL QPPVTQDSIA SPSMTHTSNT ATSIPKPISV 
KTDQGLPSLA SPAQDANHLS DTRFWSLQAQ EDQIRILHRA LLSKRTAALA KSKTSASIST 
AGSPATKKRK AESKAVSISS LSAWKHYENN VPTAVLTPDE EDDYHDQMTA ATRKVEKWME 
HYRLARESYW QMRKQSGMGI ETSQTRPFGA MDDDSEAGVD TGGLLCRQCF SNEPSWMPSL 
SGKPKIRQIC RGDQLMRCLE CTFVGCGPSS TAPSSEQHIL RHFLLSNHKL GVTCGREARV 
YCLQCGDFVY HEIFDHERDR VDLATKLPWQ AWKPHPVQRS FDALQFMRIQ DQGIFWRGMI 
AAFPPLVPIE HVRAAQFCRL RQVLFSGEWD LLPLMTSSTA KSFARAQWEK PIFQRGRILA 
PVGMYNLGNT CYQSAVLQCL VNCAPVQKYF LEQVGHHHSS CQMYRKTAGR SMSSASSSKS 
KAHSVCLACE IDKILLDYVG SSMGIDVRQA LLDVCLPERR IFLQASTKKA SSTFNTPIKQ 
GEPLAPTEML AATWVCKGME HLAGYEQRDA HEFLHGFLEA LGKHTQLYRE KMYKMISTVQ 
PSNALMPLEN PIEHDFVKKT FEGKLRSVLI CQECGSKRTQ LESFLSISLP LSSEVQRVTT 
ALPGDSDPYI ANGKLSVERC LRHFTLPELL SAPIDCPSCK KKTQTKKQHV VSKLPNVLCL 
HLKRFDAAQN KKIEDFVAFP ARNLNMGPYL PHWCEVTSAP EIGGNSLQSA QVMYSLFATV 
NHFGNLQSGH YVANVKVNEK WFHCNDAHVA QAGIGIGERE VLQSNAYLLF YIRSK