Gene PHATRDRAFT_41875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41875 
Symbol 
ID7199767 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp329913 
End bp330995 
Gene Length1083 bp 
Protein Length302 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178751 
Protein GI219115912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAG CTCTACAACC GGAGTCGAGT GACGGCATAG GAGTCATCAA CAAGCAAGAT 
GCGTCGCCCG TCACAGTGGC TGATTTTGCG GCACAAGCAA TGATTCTGCG CCATCTGAAG
GACGCCTTTC CCGACGATTC GTTCATCGCC GAGGAATCCA GCGCAGCCCT TGCAGATGAA
GCCGGTTTGG CCAATCAAGT GTTGAAAGCA TCTCAATTGG GAGACATGGA TGCCTTGAAG
GAAAGTATCG ATCTCGGGAA AGAGTATGAG CATTGGGATG GATCCAGTAG GCCAAGTCGC
GTATGGTGCC TTGATCCAAT CGACGGAACC AAAGGTTTCC TTCGCGGCCG GAGAGACGGC
GGGCAATATG CAGTTGCGCT GGCTCTCTTA GAAAGTGGAA CCCCGACTAT TGGTATTTTA
GGCTGCCCTA ACTTGCCGTC CGATCCCAAG GACTTTTCAT ATGTTTGGCA GAAAGATGAA
AACCTCGAAA ACAACCAACA AACACGAGGG TGTATTTTCG TCGCCAGCAA GGATGGGGGA
TCTTTTCAGC TCCCAATTTT ACCAAAAAGT AGCTCTAGTA TCAGACTGCA TGTGACGCCA
AATGACGGCT CCACCATGGC TACATCGGAA GCTCGCTTTT GTATTGGTGT AGAAAAGTTT
AGCGATGCAT TGGGGCAGTG TTGTGCTGTC ATGGCAAAAG TTCTTCACGG TGAAGAAGGT
CTTGACGACG ACGGGAGTAT AGTTAAAGCC CGGAGAATTG ATTCACAAGC AAAGTATGGC
ATAATAGCAC GAGCGGGAGC CGAATACTAT GCGCGGTTGC CAGCACCTGG CTACGTGGAG
TGGATCTGGG ACCATGCGGC TGGAAAGGTT GTTGTTGAAG AAGCTGGCGG GAGCATAACG
GATACAAAAG GTAAGGTTAT AGACTTTTCA TTGGGTGCTA AAATGAGTGA CTCTGTGCAT
GGTGTACTTG CCAGCAGCGG TGGTGTTTTC CAAAGTGCTT TGTTGAACGC TTTTATAGAG
CAAGAGGCTG AACGTCAAGC AAAAAATGCC GACATGAATC AATTCCAAAA AAAGCATTTG
TAG
 
Protein sequence
MTQALQPESS DGIGVINKQD ASPVTVADFA AQAMILRHLK DAFPDDSFIA EESSAALADE 
AGLANQVLKA SQLGDMDALK ESIDLGKEYE HWDGSSRPSR VWCLDPIDGT KGFLRGRRDG
GQYAVALALL ESGTPTIGIL GCPNLPSDPK DFSYVWQKDE NLENNQQTRG CIFVASKDGG
SFQLPILPKS SSKKIDSQAK YGIIARAGAE YYARLPAPGY VEWIWDHAAG KVVVEEAGGS
ITDTKGKVID FSLGAKMSDS VHGVLASSGG VFQSALLNAF IEQEAERQAK NADMNQFQKK
HL