| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_4003 |
|---|
| Symbol | |
|---|
| ID | 7199822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | + |
|---|
| Start bp | 613224 |
|---|
| End bp | 615086 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178812 |
|---|
| Protein GI | 219116034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GACCCGATCG CCAAAGGTAG TTTTGGCCAG GTCTACGTCG CCTGCCACCA ACTCAACGTT
TTGGAAGAGT ATGCCGTTAA AGTCGTCGAC CGCGTCAGTC TTTCACAGAG AGACAACGAC
GCCGTCTTCC GTGAGGTAGC GATTCTCAAA GACTGCCGCG ATGTAACAAA CATTGTCCGC
CTCGTCGACT TTTTCGTATC TCCCCGGCAC TTTCATGTCG TACAAGTCTT GGCCCAAGGT
GGTGACGTCT TTGATCGACT CGCGAGTAAA ACTTCCTACA ACGAAAAGCA TGCTCGCGAT
CTCGCTCATA ATTTGCTCGT ATGTATGCAA GCCTTGCACG ATCGGGGCTT GGCGCACCGC
GACCTTAAGC CAGAAAATCT TTTGCTGCGA GATTTGATTG ACGATGCCAG CATTCTTGTG
GCGGATTTCG GGTTCGCAAC GTACGTACCA GCGGACGGAT TGAAAACGCG TTGTGGTACC
CCAGCCTTTG TGGCTCCCGA AGTGTTAGTA GCGGATTGCC GCTACGATTC CCAAGTTGAC
ATGTGGAGTG TGGGGTGTTT ACTTTACATG TTGTTGGGGG GATATCCACC GTTTCAGGAC
CGAAATCATC GGGGATTGTT TCGAAAAATC AGGGGTGCGG ATTTTTGCTT TCACGAAGCC
TACTGGAAGG ATGTTTCCGT CGAAGCAAAG CAGCTTTTGG CAGGACTTCT TACAACAAAT
CCGAAGTTTC GACTAACGGC AACCCAGGCG TTGGATAGCA AGTGGCTCAA AGTCAAGGAC
CATCGTTTGG AAAATATAGA CCTCTCTAGT TCGATTCGAG AGCTAAAACG CTTCCAGGCT
CGAATCCATT TGAAAGGTGC GATGCACGCC GTTTTATGGA GCGTCAAAAA GAAATTCCGA
ATTTCTAGCG AAGGCTTTTC CAAGCAAATC AGAGACTGGG ATCAAAGCGA CGAGGCAAAT
AGCACAGATA ACGCGAGCAA AAAGGATGAC GACGATGACA AGGATCAGGC CGCGGCTTTG
AAAAAGAATC CTATGGGGAT AGAACTTCGT CCAACAATGC AGTTTCGTGA TGTCTACGAG
CTAACCGACA AGATTCACGC ATCGCAACAA GCCATGATTT GGGAATGCAA GCATATTCAT
ACGGGAAAAA TTTATGCGGC AAAAGTCTGG AATATTGCGG CAAACCAACA GTCCGTCTTG
GGTAAATCTT TGACGGAGAC AGTTCTACAT GAAGTTGCGG TCTTGAGAGC CATCAAGCAC
AAATATTTGA TGGAAATTGT CGATTTTTTT GAAGAGGGCA CTCACTTGTA TCTAGTGATG
GAGCGTATGG CTGGCGGTGA CGTCTTTGAT CGCATTCTCA AACGGAAGCA CTACACGGAA
AAAGATGCCA GAGATTTTGC TCGTATTTTG CTAGAAGGCG TAGCGCATAT TCACGAACAA
GGTATTGCCC ATCGCGATCT CAAACCTCAA AATTTGTTAC TCTCCTCCAC GGATGATGAT
GCGGACATCA AGATTGCCGA TTTTGGGTTT GCGTGTCGAG TCCATACCCC TATGTCTTTG
ACGACGCGTT GCGGGACACC AAGCTACGTG GCACCTGAAA TTCTGAAGAA CATTCCTTAC
GATCAAAGAG CTGATATGTG GAGCGTAGGA GTTATTTTGT TTGTATTGCT AGCGGGTTAT
CCTCCCTTTG TGGAAGAAAA CCAATTGGAA TTGTTTGCTC GTGTCCGATC CGGTGAATGG
GATTTTGCTG GCAAAGAATG GGAAAACGTG TCCCCAGAAT CCAAGGAAGT CATCAGCCAT
TTGTTGGTGA TCGACCCTGT ATGCCGTTGG ACGGCACAGC AATGCCTACA GAGTGATTGG
TTG
|
|---|
| Protein sequence | DPIAKGSFGQ VYVACHQLNV LEEYAVKVVD RSVLGKSLTE TVLHEVAVLR AIKHKYLMEI
VDFFEEGTHL YLVMERMAGG DVFDRILKRK HYTEKDARDF ARILLEGVAH IHEQGIAHRD
LKPQNLLLSS TDDDADIKIA DFGFACRVHT PMSLTTRCGT PSYVAPEILK NIPYDQRADM
WSVGVILFVL LAGYPPFVEE NQLELFARVR SGEWDFAGKE WENVSPESKE VISHLLVIDP
VCRWTAQQCL QSDWL
|
|---|
| |