Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34603 |
Symbol | |
ID | 7199683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 1014696 |
End bp | 1017314 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179107 |
Protein GI | 219116624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCCGC TTGAGCATGT CCTTGTTAAC CTTTTGGGTG CCACGTCATT GGACTCGCCC TATCGTTGTT TCTTTGCGGA GTATGGAATT ACTCAGGCTA GTGAGTTGAC TGCTATCACT GAGGCGCGCC TTGCAACCAT CTCATTTGGT GTTGTGACAC CAGTTGCTGG AGATGGTACA TCCACTACTG TCCGTACTTT CCTTCTGCCT GCGCAGCAGG ATCGGATCAT GAAGATCATC ACTTGGTTCC TTGCCCAAGG ACCCAACGTT TCAAATGCTA CCTGGTTTGT ACTGACACCA GCTATGCTTG AATACTGGCA ACCGGCATTG GTCCCTGTTG CATCTGCTGC CCCGGCCACA TCTGTTGTTG CCTCTGTTGC TAGGAGTACT CTGGAAGAGA GTGCTGCTGC AAAATTTCGA AAAACCATTA AGAATCACTC TGTCCCATAC CCGTTGTTCA ATGAAGACCG TCTCTGGGTG ACTTGGAGTA CAAATATTCG TATCAAGCTT CGCATTCATG GTGTTCAGCT TGTTCTTGAT CCTGACTATG TTCCTCAGAC TGATGAGGAA GTGGAGACTT TTTTGGAGAT GCAAAATTTT GTCTTTGGTA TATTCAATGA TACCCTGTTG ACCGCTCGTG CACGCGGTAT TCTACACAAA CATGTTGATG ACTTGGATGC TCAGGCTGTG TATTGTGACC TGGTTGCATC ATATGGCAAG GGTATTAATG CGCAAATTAT GGCTACGTCT ATTGAGACAA GGTTGACCCT GTACTCACTT GCAACTTCAA GAGCCAAAAC CTGTGTTGCT TTCCTCACAA CTTGGAGGAA CCTCATCTAT GATTTGGAGC GCATTAATGA GTTTGAACTC CCTGATCATC AGAAAATTGT CCGCCTTAAG TCTGCTGTCC GTTTGCATCC GCAATTGAAC TTGTTCCTTG GGAATGTCCA GCTTTACTCT CGAACCCATG TGGGGAAGAG TGCCAATGAT TCTGACTTTG AATATATTTA TGATCTGATG CTTGAGCATG CCACTGATAT TGACCATACT GATCTGGAAA ATGCTAAGAC TCCTGAATCT CAGGGCACTG TGGCTTTGAA TGACTGGGAT GCCCCCTCTG TTGATGAGGA GGATGCCCTC TCTGCTGATG AAAAAGGTGT CATTCCTGCT GTGGATTCAC TCAATGCCTT GAACTTGAAT GAGCCTGAGA CTCTGGTACA TGCTGAAATG ACTCAGCCAC TGCAATCTGT TTCTTCTGAA AAGGGCCATA TGCTTTATTC CCTTGCTTCT AATGCTTCTG TCCAGCAGCA TGTTCCATCT GCCCACACCC TTTCTGATAC TGTGTCCTTG AATGGTGTCA TATACTGTCG GCAGGTTAAT TGTGCCTCTG TTTGCCTTTC CTCCTTTCCT GTTGGTGGTC CTGTTCCTCA TTCACTCATG GATGGAGGGG CCAATGGTGG TTTGAGTGGC TCTGATGTTA GAGTGATTTC TGAATCTGTC TTGACAGCCA ATATTTCTGG AATTGGTAAT ACCAACCTTA CCAACCTTCG TCTGTCAACG GTGGCCGGAC TCATTCACAC AACGGATGGT CCCATTATTG GTGTGTTTCA CCAGTATGCT CATCTGGGTA CTGGTCATAC CATACACTCC TGCAACCAAA TGCGCTCCTA TGGAGCTATT GTTGATGATG TTCCCTGTGC TCTTGGTGGT GACCAACATA TCATTTCACC CAATGGCTGC TATGTGATTC CTCTTTCTGT TGCTGGTGGT TTGACCTATC TGAAAATGCA ACCACCCTCA GACCATGACC TTGAAACCTT TGAATGGGTT CCCTTTACTA GTTCTGCTTC TTGGGATCCT AATTACCTGT CTGATTCTGC TTCCACTGAT ATAGATTTCA GTTTGATGCC CCCTCCTGCA AATTCTTGTG CCAATTTCCC TCTGGATGGT GGGGAGTGTT TACTGGCCAA GCCCATTGAT CTTGCTGAGA AAGATCTAGG CCATGTTCCT ATGATAGACT CATCCCTCCA GAAATTGACT GCCTGCTCTT TTAAAAAATG TTTTGGAATT TCTGAGCATG AGGCATGGGG AGATGTTGAT TGGATGCACC CTCTCTACAG TTGCTACCCT GCTGTGCCTC TCCTTGTTGC TACTGATGCT GTCATGAGAC AGATCACTAT CTTTTCCTCT GTGTGGATAT GTATTGCATC AATTATGTTG AATTCTATTT GGCTGGATGA CTTAGCCAAT GTTGCTGATA TTTTGAAATT GTTGTTTGGC AATATTTTCT ATTCTGATTA TTTTGTCTCG AGAACCTCAC AGTGGGGAGT GTCAACTGGA AAGTTGTTTT TGAGTACCGC CTCGCGCGAT TGCGCGCATG CCTTGAGTCA CGGCACCCAA GGCAAGCCGG CCAAAACTAA TCTTGTGTGT TTGGTCACAG ATTGCAAGAC TGATTGTTTT GGATTGGTGA CTGGACAGTT GAATGTCCAA AAACATCATG TGACTGTTTT GGGTCTCGAC CGTTACCACG CTCAGAAGCA TGGTTACTAT GACAAACTTG ACCACGGTAG CGTGTACAAT ACCGTGGGAT TGATGAAAAT GGTCCACGGT GATGCTTAA
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Protein sequence | MDPLEHVLVN LLGATSLDSP YRCFFAEYGI TQASELTAIT EARLATISFG VVTPVAGDGT STTVRTFLLP AQQDRIMKII TWFLAQGPNV SNATWFVLTP AMLEYWQPAL VPVASAAPAT SVVASVARST LEESAAAKFR KTIKNHSVPY PLFNEDRLWV TWSTNIRIKL RIHGVQLVLD PDYVPQTDEE VETFLEMQNF VFGIFNDTLL TARARGILHK HVDDLDAQAV YCDLVASYGK GINAQIMATS IETRLTLYSL ATSRAKTCVA FLTTWRNLIY DLERINEFEL PDHQKIVRLK SAVRLHPQLN LFLGNVQLYS RTHVGKSAND SDFEYIYDLM LEHATDIDHT DLENAKTPES QGTVALNDWD APSVDEEDAL SADEKGVIPA VDSLNALNLN EPETLVHAEM TQPLQSVSSE KGHMLYSLAS NASVQQHVPS AHTLSDTVSL NGVIYCRQVN CASVCLSSFP VGGPVPHSLM DGGANGGLSG SDVRVISESV LTANISGIGN TNLTNLRLST VAGLIHTTDG PIIGVFHQYA HLGTGHTIHS CNQMRSYGAI VDDVPCALGG DQHIISPNGC YVIPLSVAGG LTYLKMQPPS DHDLETFEWV PFTSSASWDP NYLSDSASTD IDFSLMPPPA NSCANFPLDG GECLLAKPID LAEKDLGHVP MIDSSLQKLT ACSFKKCFGI SEHEAWGDVD WMHPLYSCYP AVPLLVATDA VMRQITIFSS VWICIASIML NSIWLDDLAN VADILKLLFG NIFYSDYFVS RTSQWGVSTG KLFLSTASRD CAHALSHGTQ GKPAKTNLVC LVTDCKTDCF GLVTGQLNVQ KHHVTVLGLD RYHAQKHGYY DKLDHGSVYN TVGLMKMVHG DA
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