| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34592 |
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| Symbol | CPF2 |
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| ID | 7199524 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | + |
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| Start bp | 983416 |
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| End bp | 985541 |
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| Gene Length | 2126 bp |
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| Protein Length | 610 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | cry-dash from the cryptochrome/photolyase family |
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| Protein accession | XP_002178889 |
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| Protein GI | 219116188 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTA GCAGGTCCAA GCAGTCTTTT TGGTTCCTTA TCTTTGTTCA CACCGTCCTT
ATCTTGACCT TTGCTGCCGG TGCCGCCACT GCCATGAGAG GAGCATCCGT CAGTACCGTG
ACGAAAGCGA CCTCACGCGC CTCGTCGCAA GTTGTCTTGC ACTGGTTCCG ACACGGAGAT
TTACGCTTGC TGGACAATCC GGCCTTGATC CATTCCAGGT AAGAGTTACA CGTTATTTTG
TCTTTGCGAC AGCTCGAGTA GGAATGGAAC GCACAAAAAC TCGAGTCCGT CCCCACGAAC
TTCCAACACA AACCTTTCCT CACTCATCTT TACGTGTGAC CCTTCTTGTT GGCTTGTTCG
TTAGCAAAAC TGCCGAATCT TGTGTTCCCG TCTTTTGTTT CGACGACAGT GTCTACGGCA
ACGACAATCG GACTCCGGAC ACTCGCGCGC CGCATTCGAA CGATCGCGGT CAACTCAAGT
GCGGACCCCG TCGTGCGCAG TTCGTACTGG ATTCGGTCCA GGATCTACGA CGCAGTCTAC
AATCCCGAGG TAGCGCCTTG TACGTGGCGC ACGGGAAACC CGCACAAGTC TTCCAAAGAT
TGGTGGATGC CTGGCCGGCG GTTCCAGCCG CCGACACTGC CGCTCCGAAC GGCAGTCTAC
TCACCATTGT TTGTCAGCGG GAAGTGGTGC GGGAGGAAAA CGACGCGGTC CGAGCGGTAC
AATCCGTTCT ACGCCGACGC TTTCCGCAAG CCAAAGTTCA ACAAATTTGG GGCTCCACCA
TGTACGAACT GGACGATTTG CCCTTTGCCA CGGACCTCGC CAACATGCCC GATACCTTTA
CGCCCTTTCG GAACAAGGTG GAAAAGAATT GTCAAATTGG CACACCCCTG CCGGTACCCA
AGCAACTCTC TCTGCCGGAG AATTTTCCTT CCGCCTTGAA ACAAGGCCTG GAGTACCTAC
CCACCTTAAA AGAGCTGGGG TACACGGATG CGCAAATTCA GCAAGTCGAA ACCCATGACG
AGCGCGGAGT CCTGCACTTT ATGGTGGCGA AACAGCCGGA CTCGCACGTG TTGAGGACTA
CATTTGGACA CAGGATTGTT TGAAGGATTA CTTCGAAACG CGCAACGGGA TGCTGGGGCC
GAACTATTCG ACCAAATTCA GTCCCTGGTT GGCCCACGGC AACGTTTCAC CCCGGTACGT
GGCCGCACAG TGCCGTAAGT ACGAAGAAGA ACGCGTGGAG AACAAATCTA CCTACTGGGT
AGTCTTTGAA CTGCTGTGGC GCGATTTTTG CAAATTTTTT GCCACGAAAC ATGGTGACGC
TATTTTTTAT CCGTACGGGA CGACCGAACG CACGGATCGG CACAAGCCTT GGTCGACCTT
TGGTCGTAAT TTACAGGCGT GGCAGGAGGG TCGCACGGGC TACCCTCTCG TAGACGCCAA
CATGCGAGAA TTGGTCGCCA CCGGCTTCAT GTCAAATCGT GGCCGTCAGA ATGTGGCATC
CTTTCTCGCC ATTAACTTGA ATCACGATTG GCGATGCGGC GGGGATTTCT TCGAAAGCCA
TCTGGTACGT TAAGGAGAAC ATTGTGTGGA CGTTTCCACG TTTTGGAATT GTTACTGACA
CTTAATATTC GCGCATTTCT GAAATTCTAT TTTTGTCTTC GTTGCGGTGT TGGTGGTTGC
TGCAGTTGGA TTACGACGTG TATAGCAATT GGGTGAATTG GTGTGCGGCC GCGGGTATGA
CGGGTGGTCG TCTCAACCGA TTCAACATTT CTAAGCAAAG CAAGGACTAC GACCAACACG
GCGACTACGT GCGGCATTGG TTACCGGAAC TGGCCAAGGT GCCCAACGAA TTCGTCCATG
AGCCTTGGAA AATGACGTCG TTCCAGCAGA TGGAGTACGA GTGCAAACTC GGCGTGGATT
ATCCCAACCC GATTGTTCCG CCGTCCCGGC CCAACCCCCA CACGGACCGG AACAATCGCG
GCCGTGGTGG GCACCAGTCA AAAGGCAACA ATCGCCACGG TCCACCCGAC AAATCCCGCA
AAGCCAATGC GAGTGGAAGC AACCGACACC AAAAATACGA AATGAAGAGT CTCCAACCCG
GCAGTTTTCG AGTCAAGGAA TCGTAA
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| Protein sequence | MSSSRSKQSF WFLIFVHTVL ILTFAAGAAT AMRGASVSTV TKATSRASSQ VVLHWFRHGD
LRLLDNPALI HSSKTAESCV PVFCFDDSVY GNDNRTPDTR APHSNDRGQL KCGPRRAQFV
LDSVQDLRRS LQSRGSALYV AHGKPAQVFQ RLVDAWPAVP AADTAAPNGS LLTIVCQREV
VREENDAVRA VQSVLRRRFP QAKVQQIWGS TMYELDDLPF ATDLANMPDT FTPFRNKVEK
NCQIGTPLPV PKQLSLPENF PSALKQGLEY LPTLKELGYT DAQIQQVETH DERGVLHFMV
AKQPDSHDCL KDYFETRNGM LGPNYSTKFS PWLAHGNVSP RYVAAQCRKY EEERVENKST
YWVVFELLWR DFCKFFATKH GDAIFYPYGT TERTDRHKPW STFGRNLQAW QEGRTGYPLV
DANMRELVAT GFMSNRGRQN VASFLAINLN HDWRCGGDFF ESHLLDYDVY SNWVNWCAAA
GMTGGRLNRF NISKQSKDYD QHGDYVRHWL PELAKVPNEF VHEPWKMTSF QQMEYECKLG
VDYPNPIVPP SRPNPHTDRN NRGRGGHQSK GNNRHGPPDK SRKANASGSN RHQKYEMKSL
QPGSFRVKES
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