| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34536 |
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| Symbol | Lhcf16 |
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| ID | 7199648 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | + |
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| Start bp | 849258 |
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| End bp | 850321 |
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| Gene Length | 1064 bp |
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| Protein Length | 206 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | protein fucoxanthin chlorophyll a/c protein |
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| Protein accession | XP_002178860 |
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| Protein GI | 219116130 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0741765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTG TCGCTGCCAT TCTCGCTATC GCTAGCACTG CCGCTGCCTT TGCTCCGTCT
TCCAAGTCCA AGGTGCGCTC ATCGCGGAAA TTCTTGTTAA GCGACCGCGT GCCGATCCCC
TCCGTTTCGT AGATGTGTTG ATTGACAGCG ACAAATGGCG ACGGATACCA TTCCATGGAA
GGGTATCGAT GGTATCCGTC GCTATCCGTC CCTGTCAATC AACAGATCTT CAAAGTTTGT
TTGGCACTGG CGATGATTCG AGAAAGTAGC GCGTCGGCTT TTTCCCACTT TCAAGGATGA
TGTTCCCCGG CACCCACGGC CTCTTTTTCC GTCCCGCGTC CCTCTAACAT TGTGCGTCGT
TGAATCATCC ACAGGCTCCC ACCACCGTTA CCCGTGTAGC GCTCGATGAC CTTGCGGGTA
GCACGGCTCC GTTGAAACGG TTCGACCCCC TCGGCTTGGC ACAAGTCGGC AGCGAGCAGA
CCTTTGCCTG GTTCCAAGCC GCCGAGCTGA AGCACAGCCG TGCCGCCATG TTGGCCACCA
CCGGGTTTAT CGTCCAGGCC GCCGGAATCC ACTTTCCCGG TATGCTCAGC AAGGATATCT
CCTTCGAATC CCTTTCCGGC ATGAACCCTG TGGAACAGTG GGCCGGTGTG CCTGATGCTG
GTACGTGAAC ACGGTTGCAA TAAAGTCGGA CGTGCTCCGT TTCCGTCATC TGCAACGACG
CGCCGATCAA CTAGCTTTCT CGTCCGTACG GCGAATCTTG AAGTCTCACT CATACGACAC
CTTCTTTTTC CGTTTTGACA GGTAAGTGGC AGATCATCCT CACGATCTTT ATTGCTGAAA
TCGCCACCGA AGCCAAGAAG CCGCATTACA TGATGGGCGG TGATCTACCG ACCATGGTAT
TCCCCCCGAT TGACTTTTCC AAAGTTGACG CCGCCACTCT CAAGACCAAG CGAAGCCGCG
AACTGAACAA TGGACGTCTC GCAATGATCG GCATCATGTC CTTCATCAGT GAATACAACA
TCCCCGGATC GGTCCCGGTC CTTAGTGGGC TGGATGCCTT TTAA
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| Protein sequence | MKSVAAILAI ASTAAAFAPS SKSKAPTTVT RVALDDLAGS TAPLKRFDPL GLAQVGSEQT
FAWFQAAELK HSRAAMLATT GFIVQAAGIH FPGMLSKDIS FESLSGMNPV EQWAGVPDAG
KWQIILTIFI AEIATEAKKP HYMMGGDLPT MVFPPIDFSK VDAATLKTKR SRELNNGRLA
MIGIMSFISE YNIPGSVPVL SGLDAF
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