| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34367 |
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| Symbol | |
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| ID | 7199782 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | - |
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| Start bp | 398061 |
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| End bp | 401660 |
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| Gene Length | 3600 bp |
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| Protein Length | 837 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178993 |
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| Protein GI | 219116396 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00490098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAT CGACACGCCG CTCTTCTCGC CGCCGCGAGA AAACTGTGTA CAGCGTCGGA
GATCTTGTCG AGGTGAGTTG GTGGTGCGAT ACTTTTTCAT AAACCTTAGC CGCGCTCTTA
TTTCACTCCA TTTGAATGCA TTCTTCAGGT GACCCGCGAC GAGTCAATTG CTACGGGTAG
ACTTGCATCG AAACAGACCG ACACTGCTAA ACCCCGTTGG CTTGTAAAGT TTGACGAATC
TTCATGGCCA AGCATGGAGC TATTGGAGAC TGAACTTGGG CCTATTCTTG ATAGAAGCGA
CGACAACGCG TCTCAAAAAG AAAAGCAAGT AAGGCAAAAA TCATCGTACG AGTTAGGAAC
CACTTTGGGT GGGCGCGGCT CCCCAAGTAA GCGATCTTCC TCGCCGATGG TATCAGGCAA
GAGCGAAAAC GGAAAGGCGT CCCCGATATC TACGAACAGT TCAGATTCCA AGAAGAAAGT
AGAGTTCATC GCTCTTCAGG AAGAGTCTGA CATGTCTGGG TCCAAGAAGA GACCCGGTTC
TTTATCCAGG GAGGAGCGAA GCAAACGTCG TCAGGCCATG ATTGAGCAGG ACAAACTGAA
TTGGTCGAAG CCAGTTATGT CGCGACCCCC GAAAAAGAAA AAGGCGCAGC GCGATGAAGA
AGTTGTTCGG GTACCAATGC TTACGGGTAC ACTTTTGCTA TATCGCGGTG CTCATCGCCG
GGCCGAATTT GTGCGTAAGT TTTGAATGAC ACTGAGTTAA AAGCTTACAT ACGCAGATCA
TATGGTAAAT TTGATTTGTA GGCGGATTTA GATCAACGAA ACATATTTTA CATATGATGG
CAATTGAATA GTAGTGTGCT AGAGACGCTA TTCCTTAGAC TTTATATTCG CGAATATAGC
GCATTCGGAT AGGCGCGTTG CAATAGAAGT ATTGGAGACA AAGAAACTGC AGTAACGTTC
TTAACTCCCA TGTCTTGTCA CGAGCGCTGT GTTCGGAGGT TTTCCTCGGA AGAATGTCGA
TGCGAAGGCT GTAGAGGAGG AGTGTGTGAG ACGTTCGTTC ACAGTCATGT CAAGGAAATA
TGTGAAACGA AAACACAACA TTTTTCAGTT TTTTGCATTC ATCATTTTTC TAAAGGACGT
TTTAAAGCGT TAATTTGAAA AACTGTCGAG ACATATACAT AGAAGAAATC CCAAGGAAGA
GCTAGGTAAA GTAAAGACTT TTCACTTTTA CATTCTTTCG ATGTCGTATC TTGTAGTTAC
AGATAGTGAT ATCAACCCAC CTGCGAGGCG AGTCGCTTTC ATCAGTTTTG GCGAAAATAG
CGGCGGAGTG GCAGTGATTG TGCCGTCTGT TTTAAATTTC GCCCACATGA ATCTACAGAA
GTAAGCTTGA GACTTGGCAT GCATGCCCGT TTCCGGACCA TTCAACAAGT GCTTTATTTC
GATTTTTTGA CTTATGGTAC TAAGCAACAG CAAGGACGAA CACGGAGACT GGGTGGCATT
CCGTGACACG CCAGCTTCTT TCGAAGCCAG GAGTGTAAAC GAAAAGAGAA GTGTACTCAA
TGTTGCTTCC AAAAATATCT CGCGCAGAAA CTCCGGTACA GGTTCTTGGA TGGGAAAACC
CATCAATGCT GATGCATCGT GGGTCCCGGT GGCCTCCCCA GCACCAGGAA CGTATTCGCC
TCGTCCGTCC AGTCCACAAG GTTCTCGCAT ATTGTTTAGA GAGTTCGTGG GGAATCGCAA
GAAAGAGCGT TCTGATATTT TGACCCCATC TCAACCATTT ATGTGTCGAA GCAGCGCAAC
ACAGTCATCC AGCTTACAAG CTTGCAAGAG TGACATCTTG TCAGGAAAGA AACTCAAGAA
AGGTAGATCG GGCTCGTCCC CAGTGCCTCG TATTGTAATC CCTCTGAAGC CGGACCCTTC
GATACTTCGT ACCCGTACAC GTAGTACCAC AGTGTCAAGC GGGGAAGACG AAGATCAGAA
TCGATGTTCC CAAGCTCAAA ATGGTATTAG GGCTGCTAGT GCACATGAAA GGCGAGGACG
GTCCAAAAGC CGCAGTCGGC ATTCGCGATC ACCGTCGCCT AGAACTAGGT CGAAGTCAGT
TTCTGGGAAT AGTCAATCAA ACAACCGACG TGGGCGATCC AGTAGCCGCC CACCTGTAAC
ACGGCCGAAC ACTGTGCGTG AGTCTCGCGT TAAATCTCGA TCAAGCAGCC TGACTAGGAT
CACAAATCAC AGGGGACCGA CAGTGGTTCC ATCACCTTCA GCAAGGTCAG TAATTAACTT
TCCCCATGCA TCTCTGTCGA CCACGTGTCA TCGTAGAGAA AATGGCAGTA CCGGACCAGG
TATGCTCCCC TGTTCCAAAC AGAGACGGGA CCCTAAGATC GGACGAGATA TCAGCTTTGG
AACGGTGCAT TTATCTGACT CATCATCGGT ATCAATCAGA AGTGAAAAGA GTGGACTGTT
CGAGAAAGTT TTTGGCTTCC CAGGCGGACA AGCTTTGCAG AAACCTCAAG TAAAGCACTC
CATTTCGACA CGACCCCGTA TTCTTCTAGC TGCAACAGTG TACCACAATA CAGCGACTGG
TCTATGGATC ACAACAATCA ATACAAATCA ACGAGGAGTA TCAAAAAATC CTGCACAAGC
GAATAAATTT CTAAAAGCAT TCTCGTTTCC TACAGAAAAG GAAGCTCGAG AGTCAGCTAT
CGCAAACGCC CCACCGAAAA TGGTCTCCTT TCAAGAGTCA GCTAAATGCT TCCATTGCAG
GAAACTTTTC GCAGTTTTCA AGCGCGCCTG TCATTGTCGA AACTGCGGTG TGTGTATTTG
TGCCAGCTGC TCAATATCTT GGCCTGCTAA GATGCTTCCA GAAACATACA ACCTGAAAAA
TGAAGCTTCC TTGAAAGTTT GTACAAGTTG TGATACTCTT AGTTCTCTCT TCAAAAAAGC
GCTCTTGGAA GCGAAATATG AAGAAGCGAT AGCAATATAT GAGACTGGTA ACGTCAACCT
GCGTACTCCT TTTCCTCCTG CTAACAAAAA GGATGAAGTT CTTTATCCCA TCCATGCTGC
TATTGAGGGC GGCAACCTTA AGCTTGCGCG TTGGCTTGTC GAAGACCGCT TCTGCCCTCT
AAAGCAAATC AGAGCCGGGC GATCGAAGTC AGATAAAAAC GCACTTATTC AGACGTCGAA
AGGGCGAACT GTCTTGAGTA TTGCTATGGA GTTCCTTCGC ATCGGTATTC TACGATTTTT
GGTTGTTGAA AGAGGAATTT CCGTATTCGA AGCTACGGAT ACAAGAAGCG CCCTTCGGAC
TATTGAGGCG GCCTTGGTTG CTCTGCCCTG CTCTTCAGAA GGAGATGGAA TTCGAGAAGA
CGGGGCTTCC ATAGCGCGGT GGGACCAAGC CTACTTCGAC GATATGTCGG AACCGAGTAG
CCTCGGAGAC GATGATAATG TCACAATTGT AAGCCGATCG GTTCGAACAA GAACGAACAC
GGGCGACTGT TGCATAATTT GCATGGATCA CAAAATTAAT TGTGTTGCGA CTCCCTGCGG
ACATCAGGTA TGCTGTTTGG GTTGCAGTGC GAGCCTTTCG GCATGCCCAG TTTGCAATAA
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| Protein sequence | MTESTRRSSR RREKTVYSVG DLVEVTRDES IATGRLASKQ TDTAKPRWLV KFDESSWPSM
ELLETELGPI LDRSDDNASQ KEKQVRQKSS YELGTTLGGR GSPSKRSSSP MVSGKSENGK
ASPISTNSSD SKKKVEFIAL QEESDMSGSK KRPGSLSREE RSKRRQAMIE QDKLNWSKPV
MSRPPKKKKA QRDEEVVRVP MLTGTLLLYR GAHRRAEFVL TDSDINPPAR RVAFISFGEN
SGGVAVIVPS VLNFAHMNLQ NKDEHGDWVA FRDTPASFEA RSVNEKRSVL NVASKNISRR
NSGTGSWMGK PINADASWVP VASPAPGTYS PRPSSPQGSR ILFREFVGNR KKERSDILTP
SQPFMCRSSA TQSSSLQACK SDILSGKKLK KGRSGSSPVP RIVIPLKPDP SILRTRTRST
TGTDSGSITF SKRRDPKIGR DISFGTVHLS DSSSVSIRSE KSGLFEKVFG FPGGQALQKP
QVKHSISTRP RILLAATVYH NTATGLWITT INTNQRGVSK NPAQANKFLK AFSFPTEKEA
RESAIANAPP KMVSFQESAK CFHCRKLFAV FKRACHCRNC GVCICASCSI SWPAKMLPET
YNLKNEASLK VCTSCDTLSS LFKKALLEAK YEEAIAIYET GNVNLRTPFP PANKKDEVLY
PIHAAIEGGN LKLARWLVED RFCPLKQIRA GRSKSDKNAL IQTSKGRTVL SIAMEFLRIG
ILRFLVVERG ISVFEATDTR SALRTIEAAL VALPCSSEGD GIREDGASIA RWDQAYFDDM
SEPSSLGDDD NVTIVSRSVR TRTNTGDCCI ICMDHKINCV ATPCGHQCEP FGMPSLQ
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