Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34307 |
Symbol | |
ID | 7199901 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 259963 |
End bp | 261116 |
Gene Length | 1154 bp |
Protein Length | 344 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178962 |
Protein GI | 219116334 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGC TGGATCAACT AGCAACGCGA TTGAAAAGCA CACGGACGAA CACATCGGGT CTCACAATTC TCATTACGGG AGCCACAAGG TACGTGAACG GTCAGTCGAC ACACCTACGT GCCGCTTGCT CAAGCTTGTA CTGACGGATC TTTGCTGCCT TTTTCCTTAA AGTGGTATCG GTATCTACGC TGCGAAACTC CTTGCTAGGA TTAACCCATT AAATCGCATT ATCCTCGTCG GCCGGACTCA AGCAAAAGCC GACATTGCAC GGAACGAAGT AATCACCGTA TTACCCAAAG ATGAAGGCCA CGAAGAAAAT GTTATAGCCC TTGCATGCGA TCACTGCTCA TTGAACAGTG TCAAACCATT TGAAGCTGAA TTGCGCGCCA AGCTGAAAGA AACATATCGG GTGGAAAAGT GGGCCATGAA TGGCATCGAT GTACTCTGTC TGAATGCTGC GGTGCTGGTA CCACAGGGTT CAGAACCTGA ATTTACCGTC GACAACCTGG AAGTTACGTT CCAGACAAAC TATTTGACGC CATTTCTAGT TGGGAACTGT GTTCTTGATT TGCTGAACCC TGGAGGTCGC GTTGTCGTGG CAACCAGCGG TCTTCATGTT GGGCAGACTC TAAACTTTGA TGGGATGATT GATGACGAAA GCGGAAGCGC AAAAAAGGAG TTCAGTATGA TTGACGACAG TGAGTTTCAC TTCAAGCAAT GTTACACATT ATCTAAGGTC TGCAACGTTG CCTATTGTCT CGAGTTGAAC CGCATTTTGC AACCCAGAGG TATAGTGGCG AACTGTTTTT CGCCCGGACT CATGACCACG TCGGGTCTCT TTCGCCACCA ATGTTATTCG GGCGACTCAG GCACGTTTGT ACAAAATAAA CATGTGCTCA TGAAAGAGAA AACCGTCGAA TGGGGTGCCG GTGCGTTAGT ATTCATGGTA CTGGCCGATA TGTCGGGCAG GCGAGGTGGT GAATTTTGGA GGGATTCCAA TTCTACAAAA GGTGCAAAAG CTATATACGG AAAAGAATTT TGCCCCTGTG CCATTTCTGA AGAGTCTATC AGCCAAGAGA AGCGAACGCA ACTCTGGAGG CTATCGTGTG AACTAGCCGG CATTCCTTGT GATCACAATC AAATTGAGTA TTAA
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Protein sequence | METLDQLATR LKSTRTNTSG LTILITGATR INPLNRIILV GRTQAKADIA RNEVITVLPK DEGHEENVIA LACDHCSLNS VKPFEAELRA KLKETYRVEK WAMNGIDVLC LNAAVLVPQG SEPEFTVDNL EVTFQTNYLT PFLVGNCVLD LLNPGGRVVV ATSGLHVGQT LNFDGMIDDE SGSAKKEFSM IDDSEFHFKQ CYTLSKVCNV AYCLELNRIL QPRGIVANCF SPGLMTTSGL FRHQCYSGDS GTFVQNKHVL MKEKTVEWGA GALVFMVLAD MSGRRGGEFW RDSNSTKGAK AIYGKEFCPC AISEESISQE KRTQLWRLSC ELAGIPCDHN QIEY
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