Gene PHATRDRAFT_34307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34307 
Symbol 
ID7199901 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp259963 
End bp261116 
Gene Length1154 bp 
Protein Length344 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178962 
Protein GI219116334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGC TGGATCAACT AGCAACGCGA TTGAAAAGCA CACGGACGAA CACATCGGGT 
CTCACAATTC TCATTACGGG AGCCACAAGG TACGTGAACG GTCAGTCGAC ACACCTACGT
GCCGCTTGCT CAAGCTTGTA CTGACGGATC TTTGCTGCCT TTTTCCTTAA AGTGGTATCG
GTATCTACGC TGCGAAACTC CTTGCTAGGA TTAACCCATT AAATCGCATT ATCCTCGTCG
GCCGGACTCA AGCAAAAGCC GACATTGCAC GGAACGAAGT AATCACCGTA TTACCCAAAG
ATGAAGGCCA CGAAGAAAAT GTTATAGCCC TTGCATGCGA TCACTGCTCA TTGAACAGTG
TCAAACCATT TGAAGCTGAA TTGCGCGCCA AGCTGAAAGA AACATATCGG GTGGAAAAGT
GGGCCATGAA TGGCATCGAT GTACTCTGTC TGAATGCTGC GGTGCTGGTA CCACAGGGTT
CAGAACCTGA ATTTACCGTC GACAACCTGG AAGTTACGTT CCAGACAAAC TATTTGACGC
CATTTCTAGT TGGGAACTGT GTTCTTGATT TGCTGAACCC TGGAGGTCGC GTTGTCGTGG
CAACCAGCGG TCTTCATGTT GGGCAGACTC TAAACTTTGA TGGGATGATT GATGACGAAA
GCGGAAGCGC AAAAAAGGAG TTCAGTATGA TTGACGACAG TGAGTTTCAC TTCAAGCAAT
GTTACACATT ATCTAAGGTC TGCAACGTTG CCTATTGTCT CGAGTTGAAC CGCATTTTGC
AACCCAGAGG TATAGTGGCG AACTGTTTTT CGCCCGGACT CATGACCACG TCGGGTCTCT
TTCGCCACCA ATGTTATTCG GGCGACTCAG GCACGTTTGT ACAAAATAAA CATGTGCTCA
TGAAAGAGAA AACCGTCGAA TGGGGTGCCG GTGCGTTAGT ATTCATGGTA CTGGCCGATA
TGTCGGGCAG GCGAGGTGGT GAATTTTGGA GGGATTCCAA TTCTACAAAA GGTGCAAAAG
CTATATACGG AAAAGAATTT TGCCCCTGTG CCATTTCTGA AGAGTCTATC AGCCAAGAGA
AGCGAACGCA ACTCTGGAGG CTATCGTGTG AACTAGCCGG CATTCCTTGT GATCACAATC
AAATTGAGTA TTAA
 
Protein sequence
METLDQLATR LKSTRTNTSG LTILITGATR INPLNRIILV GRTQAKADIA RNEVITVLPK 
DEGHEENVIA LACDHCSLNS VKPFEAELRA KLKETYRVEK WAMNGIDVLC LNAAVLVPQG
SEPEFTVDNL EVTFQTNYLT PFLVGNCVLD LLNPGGRVVV ATSGLHVGQT LNFDGMIDDE
SGSAKKEFSM IDDSEFHFKQ CYTLSKVCNV AYCLELNRIL QPRGIVANCF SPGLMTTSGL
FRHQCYSGDS GTFVQNKHVL MKEKTVEWGA GALVFMVLAD MSGRRGGEFW RDSNSTKGAK
AIYGKEFCPC AISEESISQE KRTQLWRLSC ELAGIPCDHN QIEY