| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34225 |
|---|
| Symbol | |
|---|
| ID | 7199861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 67103 |
|---|
| End bp | 69595 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178922 |
|---|
| Protein GI | 219116254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTAC CACCATCCAA GGCCGTACCT CACACGAAAT GTCGTCCGTT GACTAGCACA
GGCGAGCTCA CATTTAAAAG GGCTCGTCGG TCCTCGGAAG TGGACGAAAC TCTGGCCGTT
TGCCAGTGTT GGAGGATTCT TCGTTCGCTT CTCGTGGCGA CTACCGATCG GCCTCGGCCT
CGGCTTCCGG ATTCGCTGCA ACAAACAAAA ATCAAGAATA ATTTGGATGC GTTGCGCACA
GTGCTCGACG AAAACGGCTT TCGCACGTCG ACTGTCATGT CGCCTCGACC AGGTTTGTCG
TTGTACAAGG ATTCGTTCCG GCTCAAGTGC GAGAAGGGAA GCCAAGGCCC ACCAAAGAAT
AGCATATACG ACAACCAAAG AAATCTGGCG AGAGAATTCT TGATTGTAAT GTTTGGCCTG
TATCCACACC AGGAGACGCT GGAACGCCTC TACACTTCGT CGTTCAAGAT GGTGTTCAGC
CTCTTGCTCT TTTGCGACCG TCTACGGGAG GCCTGTCCTG ACGCCCTACA GGACACCGAA
GTGCAAAAAC TCGTCGACCA AGCTGAAACA GAATGTCGAT TGCTAGGAAC GTCGTCTTTG
GATTCAATAT CCGAGCAAAT ATACGCAGCT AGTCGCAAGG TGCCGGAAAA GATTGCCGGG
TTGATTCAAA CTGCGGTACA AAGCGACCCC AGGCTTCGTG TTGAGCAGCT TCAACACGAG
CACGAGAGGA TTCTCTGTTG CTATTCCACC GTCTCCAACG TTCACATGCA GCTCTTTACA
CAATATTATG ATCTCGTCAT CAAAGACGTG TACTTCAAAG ATTCGCACAT AGAAAAGTAT
CAGCGAATCA CTATATATTT GTACGAGCCG GACGTAGATT TGCTTGCGCC TCCCAAGTTT
ACCTTCTTAC CGTCTTTGTA CACGGCTTTG ACTCGCGGGG CTGAGGCAGT TTCCGAGTTG
ATGGTCGACA CTTTTTGGAC TCAGCTTCTC CGACAAGGCT ACTTTTGTGC GACCGAGATC
CAGACATTGT TGGCACCCAG CCTGAACCAT TACTTCCTGT CAGGCGTGAC CCGGGACTCG
ACTGTTCCCA TACAGCTCAA CGCTCACTTT ACCCCCACCT TTCCGCTCTG CTTTTATTTG
CATGGCAAAG CTGGGGTGGG CAAATCGAGT CTGGCTCACG CCTTTGCCCC TGCACTTAAT
GCGACGGTGG AGCAGTATGC CGATCCCGAA ATTGTGGTGC GCTTTGTAAA GCAAAATCTC
AACAAGCCCA TGGATACGTT GCGGTTAGAG CTCGAACTAC GACCCAACAA CAACGATCTT
TCCGTCATGA GTATTATTCG AGGCCGACGC ATGACCATGA GACAGAGCAA ACCGGGCTTG
GTAGTCGTAA ATTTGGAAGA AATGTCTCGA GACGATGCGA ATGCTGATCC CAATCAATTA
GCCACCGCTC AGCTCATTAG TCAGCGGTTT TCCGGACGAA CCGGTGACTG TCAGGGAGAT
GCCGGCATCC CACGTAACTC GTCAAGGCGT GGTATCAGTG AAGAAGCCAC AATCATTCCG
TTGTTCACAT CGAACTATGT CTTGGGCGTG TCGTCCTATC AAGCATTGAG CAAACTGCAC
ATGTTTCAAA ATTTGGTCTG TGTCGAAATG ATAGCGGTAT CCGGTGAAGA CCGAGTCCGC
TTCGCCAATT CATATTTTCT GCAATGCCTG CAAGATCGTC TTCCACAGTT CATTCTGGGC
AACTGCACTC TTTGTTTGGA CATTCCTTTG GGAATTGGAG ATACTCGACC TCTTGTGCGG
CACTTGCGCA TGCTTGCTTT CTATACATGT TCTACGCTCG CAATAACAAG CCAGCTATTG
CATATACACG TGTCTATCGT CAAAAAGAGC GACAGCTATA AGATTTCGGC GAATGGCATC
CAGTCAATGG AATTGAAAAT CGGTAGTATG GGCAACATTA TCCCATCCAA ACAGCGAACC
TTTGATCCGC GTACCATGCT AGCAATTGAA AAGCTTCGTT CACGGCAACT TGGCGCCGTC
GGTGCAAGCG TTCCTCTCAA TCTGGAAGAG CTCTCGATCA TTTTCGACTT CTGGCTAGCC
AAAACATTGG CACCTGCGGT CATCCTGTCG AAAGATCGGT CTCTAATTAA GAGCATTTTC
GCTTCCACGA AAAAGATAGT GGATGTCCGT TGCATCGAAC ATGTCAACTC TAGTGAATAC
AAAATGATGA AGAGCCTGTA CGATCCTAGC GATACGCCTA ATCTGCGTGA CGATATACTT
CAGTTCGGAC CTGAGTCGTT GGTATGTGTT GAACTGCATT GCGAAACAGT TGACGCTCAG
TTGTGTATCC GAGAAATTAT TGAGGACACG CCTTCCATGA CGGCTTTCTC AACCGAAAAG
TCGGCTTTGC ACAAGTCTGG GCTTTTATTT CTTGTTTACA TTCACGAAGA AATTACACCG
GAACTAAGAT CGCGGGCTTC TCTGATTGTC TAA
|
|---|
| Protein sequence | MSLPPSKAVP HTKCRPLTST GELTFKRARR SSEVDETLAV CQCWRILRSL LVATTDRPRP
RLPDSLQQTK IKNNLDALRT VLDENGFRTS TVMSPRPGLS LYKDSFRLKC EKGSQGPPKN
SIYDNQRNLA REFLIVMFGL YPHQETLERL YTSSFKMVFS LLLFCDRLRE ACPDALQDTE
VQKLVDQAET ECRLLGTSSL DSISEQIYAA SRKVPEKIAG LIQTAVQSDP RLRVEQLQHE
HERILCCYST VSNVHMQLFT QYYDLVIKDV YFKDSHIEKY QRITIYLYEP DVDLLAPPKF
TFLPSLYTAL TRGAEAVSEL MVDTFWTQLL RQGYFCATEI QTLLAPSLNH YFLSGVTRDS
TVPIQLNAHF TPTFPLCFYL HGKAGVGKSS LAHAFAPALN ATVEQYADPE IVVRFVKQNL
NKPMDTLRLE LELRPNNNDL SVMSIIRGRR MTMRQSKPGL VVVNLEEMSR DDANADPNQL
ATAQLISQRF SGRTGDCQGD AGIPRNSSRR GISEEATIIP LFTSNYVLGV SSYQALSKLH
MFQNLVCVEM IAVSGEDRVR FANSYFLQCL QDRLPQFILG NCTLCLDIPL GIGDTRPLVR
HLRMLAFYTC STLAITSQLL HIHVSIVKKS DSYKISANGI QSMELKIGSM GNIIPSKQRT
FDPRTMLAIE KLRSRQLGAV GASVPLNLEE LSIIFDFWLA KTLAPAVILS KDRSLIKSIF
ASTKKIVDVR CIEHVNSSEY KMMKSLYDPS DTPNLRDDIL QFGPESLVCV ELHCETVDAQ
LCIREIIEDT PSMTAFSTEK SALHKSGLLF LVYIHEEITP ELRSRASLIV
|
|---|
| |