Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_19482 |
Symbol | sufS |
ID | 7199850 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 762437 |
End bp | 764328 |
Gene Length | 1892 bp |
Protein Length | 496 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | cysteine desulfurase for iron-sulfur cluster formation suf |
Protein accession | XP_002178841 |
Protein GI | 219116092 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCCATTCACA CAAGCTACCA CCATGAGACC CTCCAATACC ATTCTATCCT TCGTATTCAC GTTGCTGCTA TTGGCCACTT GCCTCGGTGC CTCTCACGGC TGGACAAGCC GAGTCGCTGT CGGGTCCTCC CGACGAGCGG TGGTGACCTT CGTGTCGGTC CACGACGGTT CCACGGAAAA CGCGTCGATC GGCGATACCC ACACGGACCG CGCCGACTTT CCGCACGGAT ACATTGCCAC ACGAGTCCGT CCCGACTTTA AGATTCTGTC TCGGACCGTC ACGGATCGGA ATCGCCCGCT CATCTACCTT GATTCGGCCG CGACTTCCCA CAAACCCCAG CCGGTACTGG ACAAACTCGA CGAATACTAC CAGTATTTGA ATTCCAACGT ACACCGGGGG GCGCACCAGT TATCCCGGGA GGCAACGGCC GCCTACGAAG CCTCGCGGGA CAAGGTCCAG GCCTTTGTCA AGGCACCGTC CCGCAACGAA ATCGTCTTCA CGTCGGGGGC CACGGATGCC ATTAATCTGG TTGTACAGAG CTACGGACGA GCGTTTCTGC AAGCCGGCGA TGAGGTTCTG CTCACGGCGA CGGAGCATCA TTCCAACTTG GTGCCTTGGC AAATGCTCGC GGAAGAAAAA GGACTCGTCC TCAAGTTCGT TCCGGTAGAT CCAGAGACTG GCGGGTTGGA TTGGAACGCT TTCGAATCCC TGCTGAGCCC GCGAACACGA TTTGTTGCCT TTCAACACGT CTCCAACGTC CTTGCTTGTA TTAATCCAGT ATCGGACATG GTAGCTATGA TCCGCAACAA GAGCCCCGAC GCCAAAATTC TGTTGGACGC GTGCCAATCC GTCCCGCACA TGCCCGTCAA CGTACAACAA TTGGGGGTTG ACTTTCTGGT CGCCTCCGGC CACAAAATGT GTGGACCGAC CGGCATTGGC TTCTTGTGGG GCAAGGAAGA TTTGTTGAAT TCCATGCCGC CCTGGAAGGG AGGTGGCGAA ATGATTGATC AGGTGACACT GGAGGGCTCG ACGTGGCAAC CGTCGCCGGC ACGATTCGAA GCCGGCACGC CGGCGATCGC CCAAGCGGTC GGACTCGGAG CCGCGATTGA TTACTTGAAC GAAATCGGCA TGGACAATAT CGAAGCGTAC GAGCACGAAA TCGGCGCTTA TCTGTACGCG CAACTGTCGA CCGTCCCGGG CGTGACCGTC TTGGGGCCGT CGGTCAACCG CGTGGCCCTG TCGGCCTTTG CCCACACAAC GGTGCATCCC AGCGATTTGA GTACCTTTCT AGACGTGGAA GGCGTGGCCA TCCGAGCGGG ACATCATTGC TGCCAACCTT TGCATCAAGC ACTGGGATAT TCACACTCGG CCCGGGCCAG TCTCTACTTT TACAACACGA AAGAGTATGT AGGAAAGGCG TGCCGTGCCG TGCCGCCGTC CGAGACGCGC GGGAATGGTC TCGAGAGTCC GCGATTGTTC CTCACACTAG TGTTCGTTCT CAATTTTATT CAGTGATGTG GATGATTTTA TACGTCATTT GAAGACTACG ATTGCGTTCT TTGAAAACCT AGAGTCACCT TCCGAGGAGC AGGTAGACGA TGATTTTGTT CCGTTTGTCT AGTTGGTCTC TAGAAGAAAG CGAAGTATAC ACCTTCGTGC CTCTGCCTCT GGGCTCAAGT GTTAGGTTTG CGACCAGCAG CCTGCATAGG TATGACTCTA GCCAAAGCTT GCTAGGTTTC GCGACACCGT CGAGTGCAGG AAGGGGATTG TGGCATTGTG GGTCTCCGAA ACGGTACTTG ACCGACTCTC GTGTCCGTCC GCAATTTGAA AAAGTGGACT CTTCGCGACC GGCGTTTACA TAAATTAGTA TATAGGACAC ACTTGTCTGA CC
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Protein sequence | MRPSNTILSF VFTLLLLATC LGASHGWTSR VAVGSSRRAV VTFVSVHDGS TENASIGDTH TDRADFPHGY IATRVRPDFK ILSRTVTDRN RPLIYLDSAA TSHKPQPVLD KLDEYYQYLN SNVHRGAHQL SREATAAYEA SRDKVQAFVK APSRNEIVFT SGATDAINLV VQSYGRAFLQ AGDEVLLTAT EHHSNLVPWQ MLAEEKGLVL KFVPVDPETG GLDWNAFESL LSPRTRFVAF QHVSNVLACI NPVSDMVAMI RNKSPDAKIL LDACQSVPHM PVNVQQLGVD FLVASGHKMC GPTGIGFLWG KEDLLNSMPP WKGGGEMIDQ VTLEGSTWQP SPARFEAGTP AIAQAVGLGA AIDYLNEIGM DNIEAYEHEI GAYLYAQLST VPGVTVLGPS VNRVALSAFA HTTVHPSDLS TFLDVEGVAI RAGHHCCQPL HQALGYSHSA RASLYFYNTK DDVDDFIRHL KTTIAFFENL ESPSEEQVDD DFVPFV
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