Gene PHATRDRAFT_19329 details

Gene Information

• Locus tag: PHATRDRAFT_19329
• ID: 7199762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 305757
• End bp: 309958
• Gene Length: 4202 bp
• Protein Length: 597 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178974
• Protein GI: 219116358

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0319191
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACTTTTTGAT ACTGCATCGA TCTGCATCCA CTTCTCAAGT GCTGTCTCAA GAAAGCGATG 
CAGCGTTCTA TGCTTTATCG TACCTTCGTG CCGCCCGTGT TCCGTCAACG GACGTCTCCA 
ACACCGGCCT GTGCGTCTTT TCGTCGTCCC GGCTTCTTCT CCACCGCGAC TGGCTTTTTG 
GAAAGAAATA TTACGTACGA TTCACCCAAA ACTTTCAATA TCCTTCCCGT CTTGAAGGGA 
TGTGACCTTG ATACTCGTAG TGATGTCGTT CGATGCGCCT TGTCCCGCAC GCAACACGAC 
GTTGAGCTTT TGAACGAACG TCTCGCTCAC GTCCGTCTCG GTGGGGGGCC ACAGGCCGTG 
CAGCGTCACG TCTCTCGTCA GAAACTCTTA CCAAGGGATC GAATCGAATG TATTATCGAC 
CCCGGGACCC CGTTGCTCGA ATTGTCCGCA CTTGCCGGCT TCCAGGACGA CATCCCATCC 
GGTGGTATTG TAACAGCGAT AGGGATCGTC GCTTCACAGC CCGTCATGTT TATCGCCAAC 
GATGCGACCG TCAAAGGTGG CACCTACTTT CCCATAACTG TCAAGAAACA TCTGAGGGCT 
CAAGAGATTG CTTTGCAGAA CGACCTACCC TGTATCTATT TGGTCGATTC TGGTGGAGCC 
TATTTGCCCC AGCAAGACCA AGTATTTCCC GATCGCGATC ATTTTGGGCG CATCTTTTAT 
CACCAAGCGA CCTTGTCGAG CCGAAATATT CCACAAATTG CTGTCGTCTG TGGATCATGT 
ACTGCCGGTG GGGCCTACGT CCCTAGTATG TCCGATGAAA CAATTATTGT GCAAGGCAAT 
GGCACAATCT TTCTTGGTGG ACCACCGTTG GTACAAGCAG CGACGGGAGA AGTCGTATCG 
GCTGAGGAAT TAGGTGGCGC TCGAGTACAT ACCACCGTCT CGGGGGTGGC CGACCATTTG 
GCCGTAAACG AGCTCGATGC TATGCGATTG GCGCGCGACG TCGTAGCAAG TTTGGGACGG 
GCACCTTCCG GTATTACAAG CACCAAGACA ACTTCGGAAC ACTTGCCACA GCACGAAGAA 
CCCTTGTACG ACCCCAAGGA ACTCGGCGGG ATCGTTCCCG TTGATTCCAA ACAACCCATG 
GACGTCCGTC TGATTCTGGC GCGTATCTTG GACGGTAGTC GATTTCACGA ATTCAAAAAG 
AACTACGGGA CGACCTTGGT GACCGGCTTT GGAAAACTTA TGGGTCAAGA CGTCGGTGTG 
ATCGCCAACA ACGGAATTCT TTTCCCGGAA AGTGCCATGA AAGGTGCACA CTTTGTTGAG 
CTGTGTTGCC AACGCGGGAT TCCTATTTTA TTTATCCAAA ATATTACAGG CTTTATGATC 
GGGCAAAAAT ACGAACACGA AGGTATCGCG AAACACGGGG CTAAACTGGT GACGGCTGTG 
GCGACGGCAG CCGTCCCCAA GATAACGCTA GTGGTTGGTG GCTCGTACGG CGCCGGAAAT 
TACGGTATGT GTGGGCGTGC CTTCAGTCCT CGGTTTCTCT ATATGTGGCC CAACGCCAAG 
ATTGGTGTCA TGGGCGGCGA GCAAGCTGCC AACGTACTGG CCACTATCCA ACGAAACAAC 
ATTCACGCAC GGGGTGACCA ATGGAACGCG GAAGAAGAAG CAAGCTTCAA GCAACCCATT 
TTGGACAAAT TTGAGAAAGA AAGCTCAGCG TACTACTCGA CCTCGCATCT GTGGGATGAT 
GGCATAATTG ATCCGGCTGA TACACGAATG GTACTCGGTA GCTCGTTGGC AATAGCACGA 
CGAGTTGGTT GCAACCCAAA CGCTACCAAA TTTGGTGTCT TCCGAATGTA ACCCACACGT 
GTATGCGCTA ACAGTAAAGC AGCAGGGGAA GCGAAAGGAC TGTGAATTCA TTAGTAACAA 
ATATGTAAAG TTAAAACGCA TCATTCAGCA CTGCCTCGTA TAACAAAGCT CCCTTTACGA 
ATAATCTTAG AGTCCTTCGA CATTCTTGAT TGGAGCAACT AGGGAAGTCT TGTAAAGGAT 
ACCGATGATA TATAAGACCT TGTAGACGGC TCCAATCAAC AACAGAATGC CCAAGTCAAA 
TACGGTACTG TTTTCGGTTG ATAAGACAGG AAAGAACCGT TCGAGATCTC CGAGGACTTC 
GATTCCAGAC GTTGAGTTCA CGCATACAGC GGACACTCCT TGATTTGTGC AGGCTTCAAA 
GGTCGAGGCG GAGAATGTTT CGTAGATGTT ACTGCGTACG TAGTAGCTGT ACGGCATTAT 
GTAGTAGAAG AGTTCAAAAG GCCAGTACAA GTCATCCAAC GGAATTAGGA AGCCACCAAA 
CAAGAAAGAG GCAAACCAAA AATTCATAAA CTGAAGCATG CCTAGGATAG GATCTTCAAA 
CCAAACCGAA AGCATCTCCG CCAAGGATTC AAAGACGAAC ATGAGACAGG CGAACAACAA 
TACGCAGATA CCAAACGACT CTGCGGGAAC ATCTTGAACC GCGTAGGATG GAATACCCAG 
TGAAAAAATG GCAAAGACGA AAAAGAGCGG TAGAACAAGA ATGAATTTGG CAAGTACATA 
GCTGATCCCT GTCACCATTC CATTTTTGGT CTCCCGGAGA ATCGACTTGA ATTCATCATT 
GAGGGCGTAG ACAGCAACGA CTCCCATGTT TGATGGAACA CCAACGAACC AGATGCTGAC 
CCACATTTTA TTGATGGCTT GATCCTGAGT GAAATCACGA GCATTCCAGT AGACAATGGC 
AAAGATCAGA CAAGATACGA AGAAGATGAG ACATCGACCG ATGTATCTTA CAAAGTACAA 
AGAAGGAGGA AACAAACAAA TTAGTCAACC CCTAAAACCT TGCAAGCAAC TTGTACCATC 
AACATTGTGA GTTTCTTACA AAATAGGATC GCGCACAATC AGGGCTCCAT GGCGACGGAA 
CATAATCATA AGTTCCTTTC TCAAAGGGGC ACGCTTCATG TCTACAACCC CTTGCTGTTC 
TTCGTCGTCA AATCCTTTCT TGTGGTGCGA AGAGTTTCCT CCGCCGGGTC GCTTTTCTTG 
CCACGTGTTG AGAATGCCTG TAACAACGGA CTCATCGGAG AAATCCGAGT TGACAAGATC 
CAAAAAAAAC TCCGCAGGAT TTGTTGCCGG AGGACACGGA TGGCCGATGC TTTCGAAGTA 
AGGGATCGCT TCGTTCACGT CTCCACTAAA GGCCTCGCGG CCTCGCGACA TGAGCATGAG 
TTCATCAAAA CCTTGGTATA CTTTAGTGGA AGGCTGATGG ATGGTGCAGA TAATGATAAG 
ACGTTCTTCT TTGGCCACCC GGACAATCTC TCTCATAATG TTAGAAGCTG ACGCCGCATC 
CAAACCAGAC GTTGGCTCGT CCAGGAAAAG CATTGTGGGC TGCTTCAGTA GAGCGATTCC 
GATGGAAAGG CGACGACGCT GTCCACCGGA CAAACTTCCG TTGCGGGTAT TTTCGCAAAC 
TTTCAGGCCC ATCTTGTCGA GAATCTCGTC CACTACCAAA GCCATTTCGG CACGATTGAC 
AGCAACATCG TAGAGTTCGG CTGCGAACAT AAGTGTTTCA CGACAGGTCA AGTACGGCCA 
ATGTTTATCG TGTTGCTTGA CAACATAACA GTGTGATTTG AAAATCTTGT CAGTCAACGG 
AACGCCGTTG AGGGTAACCT TTCCAGTCGC TTCTCCATAC AATCCTTCCA AGGTCAAGGC 
GGAAACGAGA GTCGTCTTAC CAGCACCGGA CGGTCCCATA ATGGCGAGGA CATCTGTGGG 
GCACGCATTG ATGGTTTGCG AACGGTACGT CGCGAAACGG GTGAGAATCT AGAGATTGTA 
CGAGGAGGAG AAGTACTCCA CAGATAGACA CTTACGACCC CATTTCACTG TTCCAGACAC 
ATCCGTGAGA ATACTCTTTT GCTTATCTTT CTTGCCCACC ACAAAATTGA CGTTTTTGAA 
GCGGAGCACA GAACTTTCCA TTCCCTGACT GTGTGTGGAG CGATGATTAG AAGTACCCAT 
CTTGCTGGTC GAGGGGTTCT CGATGACGAC ACCGGTGCCA TCTTCTTCAG CGACAGGGTC 
ATCGTCGTGT TTTTGTTCCT CCTCGGCCGA CATGTTGGTT ATAAACTGCG CTGGAATATT 
GTGTTTGTGG TATCTTTGTT TGGTCTGCTT CGATACTTAC AGTCAGGACT TGTCTCAAGC 
TT 

 

Protein sequence

MQRSMLYRTF VPPVFRQRTS PTPACASFRR PGFFSTATGF LERNITYDSP KTFNILPVLK 
GCDLDTRSDV VRCALSRTQH DVELLNERLA HVRLGGGPQA VQRHVSRQKL LPRDRIECII 
DPGTPLLELS ALAGFQDDIP SGGIVTAIGI VASQPVMFIA NDATVKGGTY FPITVKKHLR 
AQEIALQNDL PCIYLVDSGG AYLPQQDQVF PDRDHFGRIF YHQATLSSRN IPQIAVVCGS 
CTAGGAYVPS MSDETIIVQG NGTIFLGGPP LVQAATGEVV SAEELGGARV HTTVSGVADH 
LAVNELDAMR LARDVVASLG RAPSGITSTK TTSEHLPQHE EPLYDPKELG GIVPVDSKQP 
MDVRLILARI LDGSRFHEFK KNYGTTLVTG FGKLMGQDVG VIANNGILFP ESAMKGAHFV 
ELCCQRGIPI LFIQNITGFM IGQKYEHEGI AKHGAKLVTA VATAAVPKIT LVVGGSYGAG 
NYGMCGRAFS PRFLYMWPNA KIGVMGGEQA ANVLATIQRN NIHARGDQWN AEEEASFKQP 
ILDKFEKESS AYYSTSHLWD DGIIDPADTR MVLGSSLAIA RRVGCNPNAT KFGVFRM