| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_19324 |
|---|
| Symbol | |
|---|
| ID | 7199911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 303188 |
|---|
| End bp | 305074 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178973 |
|---|
| Protein GI | 219116356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.130469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGCCCCGTCA ACAAAGCAAT CCTTCACCAT CTGTAAAAGC AAGAATGCCA TCGTTCAAGG
TTTCCTTACT GGATTATGGC GCCGGTAACG TTAGATCCGT CCGGAATGCG ATTCTCGCCA
ACGGCTACGA GATTGAAGAC ATCACAGATC CTGCACAGAT TGCACAGGCC AAGGCCATCA
TCTTCCCCGG GGTTGGTTCG TTCGGATCCG CTATGCGGGT TTTGCAGGAA AAGGGTTTCG
ATGGACCACT GCGGACCTAT TTGTCCGCCC ACGATCGTCC TTTTTTGGGA ATTTGTCTAG
GAATGCAGAC GCTTTTCGAA AGTTCGGACG AACACGAAGA CGGCCGACCC GCCATTCCGG
GTTTGGGTGT TATTCCTGGT AAGGTGATCA AGTTTGATTC AACCAAGATC GCCGTTCCCC
ATATTGGCTG GAACGGACGC ATCGTGCATC AGGAATCGCC GGTGCTCCGG TATGTAGCCG
ACGACGAAGA CACGTATTTT GTGCATTCCT TTTACGCGCC CGTCATCGAA GAGAATAAGG
AGTGGATTTT GACAACTACC ACGTACGGCG ACCAACCATT CGTCAGTGCC ATCCAGCGAG
GATCCGTCGT GGCGACGCAA TTTCATCCGG AAAAGAGCGG ATCGACAGGG TTGAAGGTTC
TGCAAGGATT TCTGGAGGTT CGTATTGCAG AGTGTCTTGG AAAAATTTGC CAAGGTTTAC
GCTTGGACAC TTTTCTGTGC TGACACAGGT GCATTTGTTG GATTGTATAG GCAGTGGAAA
CCGGAACGCT TGATAAGACT AGGAGCCTGG ACGCTGACAT TAAAACAGAG ACAAAATTGA
CGAAACGAGT TGTTGTGGCA CTGGACGTTC GCAGCAATGA TCATGGCGAT TTGGTCGTCA
CCAAGGGAGA TCAATACGAC GTCCGTGAAA ATCACAAAGA GGGTGTTGTG GAGGGACGAG
GCGGTGTTCG CAACCTGGGT AAGCCTGTTA GCTTGGCTCG TCGGTATTAT CAAGAGGGTG
CGGACGAGAT TGCCTTTCTG AACATTACAA GCTTCCGCCA GGGTGTCATC GAAGATATGC
CCATGTTGCA AGTTTTGGAA GAAGCCTCCA AGAACATTTT CGTTCCCTTG ACAGTTGGTG
GAGGGATCCG CAGCTACACG GAGCCCATAT CAGGGCGAAC TTGGTCCGCA CTGGAGGTAG
CATCGCGCTA TTTTCGTGCC GGAGCCGATA AGGTGTGTCT TTGAAGCCCT TGATTGACAG
CTTTGAAACA AATGTTCCTG ACAATTTATT TTCAAACAGG TGAGTATGGG CAGCGACGCG
GTGCACGCCG CCGAGGCATA CGTTGCTTCG GGCGGGACGA AGACTGGAAC AACCTCCATT
GAAATGATTT CTCGTGTGTA TGGAGTGCAG GCGGTTGTTG TCTCTATCGA TCCTAAGCGA
GTGTACATAA AGTCAAAGGA GGAGGTAGAT TCAAAGCACG TCGTTGTTGA GTTGGGTGAT
GACCAGTTGG GGCCGACCGG AGAGCGTTTG TGCTGGTATC AATGTACGGT AAAAGGAGGC
CGGGAGGCCC GAAATATTTG TGCCGTAACG GTTTGCAAAG CGTGCGAAGC TCTTGGAGCG
GGCGAAATTA TGCTGAACTG CATCGATATG GATGGCCAAT GCAATGGATT TGACTTGTCA
TTGATGAGAG CTGTCTCCAG AGCGGTGTCG ATCCCCGTTA TTGCTAGCAG CGGTGCCGGA
ACGCCGGGGC ACTTTACCGA TGTTTTCTCG AAAACAAACG TCCAAGCGGC TCTAGCAGCC
GGTATGTTCC ATCGTAGGGA GGTCGAAATT GAAGATGTCA AGGCAGCGAT GCATGCCCAC
GGCACTGCAA CCAGGAAAAG CTCGTAA
|
|---|
| Protein sequence | MPSFKVSLLD YGAGNVRSVR NAILANGYEI EDITDPAQIA QAKAIIFPGV GSFGSAMRVL
QEKGFDGPLR TYLSAHDRPF LGICLGMQTL FESSDEHEDG RPAIPGLGVI PGKVIKFDST
KIAVPHIGWN GRIVHQESPV LRYVADDEDT YFVHSFYAPV IEENKEWILT TTTYGDQPFV
SAIQRGSVVA TQFHPEKSGS TGLKVLQGFL EVRIAESLDA DIKTETKLTK RVVVALDVRS
NDHGDLVVTK GDQYDVRENH KEGVVEGRGG VRNLGKPVSL ARRYYQEGAD EIAFLNITSF
RQGVIEDMPM LQVLEEASKN IFVPLTVGGG IRSYTEPISG RTWSALEVAS RYFRAGADKV
SMGSDAVHAA EAYVASGGTK TGTTSIEMIS RVYGVQAVVV SIDPKRVYIK SKEEVDSKHV
VVELGDDQLG PTGERLCWYQ CTVKGGREAR NICAVTVCKA CEALGAGEIM LNCIDMDGQC
NGFDLSLMRA VSRAVSIPVI ASSGAGTPGH FTDVFSKTNV QAALAAGMFH RREVEIEDVK
AAMHAHGTAT RKSS
|
|---|
| |