Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11490 |
Symbol | MCM5 |
ID | 7199856 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 40227 |
End bp | 42558 |
Gene Length | 2332 bp |
Protein Length | 667 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178693 |
Protein GI | 219115796 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGCAGGTAG ATCTGGCGCA CATTGGAGAG TACGATGCTT CCATGTTGGG ATACCTCCTT AATCAGCCCG CCCACATTCT CCCGGCATTG GAAAACGCCG CGTCGGATGC ACTCAAGTCG CTTCTCTACG AGCGCAAATA TCCTGCCAGT GCCGACGATC TCGACAAGCT CGACGAAGAC ATGCTCGACG CGACCCAGGA AACGCAAGAG TTGGACCCCA CGGAGAATTC CGTCAGTGAA GCTCTGCTCG CTGGTGTGCG TATACAGATT CTGCTCCAGG GAAGCTTGCA ACCGACACCC TTGCGATCCA TTCAATCCCA GCACATGAAT CGCTTACTCA AGTGTCCCGG AATTGTCATA TCAACGTCTC CCGTCAAGAA CCGTGCCACG ACGTTGAAAG TGCGCTGTTC CCGTTGTCTC GATTCCCAAA CGGTGTACGC TACCGAAGGG CCCTTCGGAT CGCTGACTTT GCCCACCACG TGTCGAGGGC CCAGTCCGCA CGAATGCGGT CGCTTTCCCT ACTCGGTCGT TCCGGACGAA TCCATCTTTG TCGATCAGCA AACACTCAAA CTACAAGAAG CCCCGGAACG GGTGCCGACT GGGGAAATGC CGCGCTCGGT ATTGCTGGCC GTCGAACGCT CCAACGTCGA TCAGGCAGCA CCCGGAACAA GAGTATCGGT GCTTTGCGTA CCGACTCTAT TCACCTCGGG GAAAGACGGA ACCCACAAGT CCGTCTACTT GCGTGTCCTA GGGATGACCA AGGATAACGA TGCGCACGGA GAAGCCGTCA CCTACACACC AGCCGAAGAA GAGGCATTTC GGACCTTGTC GCGTCGGCCC GACGTATACG AAATTCTGCA GCGTTCCATT GCACCAAACA TTTCTGGTTC TTACACGGTC GATATCAAGA AAGCGCTCTG CTGTCAGCTT CTGGGTGGAT CGCGAAAGAA ATTGCCCGAC GGGGTGCGCC TGCGCGGTGA CATTAACGTC CTCCTCTTGG GCGATCCCTC GATGGCGAAA TCGCAGTTTC TCAAATTTAT TTCCAAGGTA GCACCGGTGG GTATCTATAC CTCTGGAAAA GGCTCTTCGG CCGCCGGGTT GACTGCTTCC GTGGTACGAG ACGCCAAGGG GGAGTTTTAT CTCGAAGGTG GTGCCATGGT CCTGGCCGAC GGTGGTATCG TTTGCATTGA CGAATTCGAC AAGATGCGTC CAGCAGATCG TGTTGCTATC CACGAAGCCA TGGAACAACA AACAATTTCC GTAGCCAAGG CAGGTATTAC GACGGTTTTA AATTCACGCT CCTCCGTACT AGCTGCGGCC AATCCTGTCT TTGGTCGGTA CGATGATTTC AAGTCAGCCT CCGAAAACAT AGACCTCATG ACAACCATTT TGAGTCGTTT TGATGTCATA TTTCTGGTAC GAGATATTCG TGAAGAGGAA CGTGATCGAC TGATTTGCCA GCACGTAATG GGGATCCATA TAGGCGCATC CAATCGGTCG GACGGTGGTT TGGGGCATGT CAGGGGCGGG GGTGCCGACG ACGGTGGTGC TTTGTCCTAC ATGGCTGGTT CCAGCGGAAT ATCGGATCCT AACGAAGAGT CGGTCAATAG GTACGTTGAA ACAAAACTCT CATCCAGTGC CCTTTGCACC TCCACATCTC ACAAAAATTT TCCTTGGTCA AAGTTCCTCA AACGCTACCC CCGAAGCTAT CGCCGAAAAT GTTCTGCGCG TGGCTACCAC CGGCGAAGGA GAGCTAGATG TACCAGCAAT GAAGAAATAC ATTCAATACT GCAAGGCTCG TTGCTCGCCG CGTCTGTCGG AAGAAGCGGG TGAAGTCTTG ACGAGTTCCT ACGTAAAGAT TAGGGATGAT GTGCGTCGCC GGGCGATTGC CTCGTCCGGA AGATCGGATG GAAGAGACGG GGATACGCAA TCGGCCATTC CAATCACTGT ACGGCAGCTG GAAGCTTTAG TGCGTTTGTC TGAAAGCTTG GCGAAGATGC GACTGGACCC GCAAGTGCGG TCTGAAGACG TAACGGAGGC GTTGCGTCTA TTTAAAGTAA GCACGATGGC AGCAAATGCG GTCGACCAAA ATTTAGGGGA AACATCATAT GCGTCGGTAT CTGCCCCCAA CCGTGAAGAA ATGGAACGGA CAGAGGCCTT TTTGCGTAGC CGTTTGAACG TTGGGAGCAT GGTCAACAAG CAAAGGCTGG TGGAAGAAGG ATCTGGTCAA GGATTCAATG CAATCTTGAT CGCACGGGCA TTATCCATTA TGGCTAGCCG TGGTGAAGTA TTGGAAAGAA ATCAAGGTCG TTTGCTGAAG CGAGTCAAAT AA
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Protein sequence | LQVDLAHIGE YDASMLGYLL NQPAHILPAL ENAASDALKS LLYERKYPAT LLAGVRIQIL LQGSLQPTPL RSIQSQHMNR LLKCPGIVIS TSPVKNRATT LKVRCSRCLD SQTVYATEGP FGSLTLPTTC RGPSPHECGR FPYSVVPDES IFVDQQTLKL QEAPERVPTG EMPRSVLLAV ERSNVDQAAP GTRVSVLCVP TLFTSGKDGT HKSVYLRVLG MTKDNDAHGE AVTYTPAEEE AFRTLSRRPD VYEILQRSIA PNISGSYTVD IKKALCCQLL GGSRKKLPDG VRLRGDINVL LLGDPSMAKS QFLKFISKVA PVGIYTSGKG SSAAGLTASV VRDAKGEFYL EGGAMVLADG GIVCIDEFDK MRPADRVAIH EAMEQQTISV AKAGITTVLN SRSSVLAAAN PVFGRYDDFK SASENIDLMT TILSRFDVIF LVRDIREEER DRLICQHVMG IHIGASNRSD GGLGHLDVPA MKKYIQYCKA RCSPRLSEEA GEVLTSSYVK IRDDVRRRAI ASSGRSDGRD GDTQSAIPIT VRQLEALVRL SESLAKMRLD PQVRSEDVTE ALRLFKVSTM AANAVDQNLG ETSYASVSAP NREEMERTEA FLRSRLNVGS MVNKQRLVEE GSGQGFNAIL IARALSIMAS RGEVLERNQG RLLKRVK
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