| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_11337 |
|---|
| Symbol | |
|---|
| ID | 7199559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 410724 |
|---|
| End bp | 411930 |
|---|
| Gene Length | 1207 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178995 |
|---|
| Protein GI | 219116400 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAAA TTGAAGGTCA CATAGTTGAA TTTTGCCAAG ACCAAAATGG ATCTCGATTC
ATTCAGCAGC GACTTGAACT GGGAGATACT TCAGAGCAGC AGATTGTCAT GTCGGAAGTG
CTTCCAGCAA TTCGTCGTTT GCGAAACGAC GTTTTTGGTA ACTATGTCAT CCAAAAGCTT
TTAGATTTTG GTTCGGCTGA CATGAAGTCT GAAATTCGGA ATACTTTGGA GAGCGAAATG
CTGCAGCTGT CACTTCAGAT GTATGGATGC CGTGTTGTTC AAAAAGCGTT GGAGGCTTTG
CCGGAAGAAG AGCTCCCTCG ACTGCTAATG GAATTTCACC ATAATGTCCT CAGCTGCATC
CATGATCAAA ATGAAAACCA TGTCATCCAG AAGTGTGTTG AAGTGATAAA TGCTCGGGCA
AAGAAAGCAA CTGCGCTTGG GGACCACGGT AGAGCCAAGT TCTTGACCGA GCAAATCGAA
TTCATTATCA ACGATGTACT GGTGAACACC AAAACATTGT CTTGTCATCC TTACGGCTGT
CGAGTACTTC AACGGATTCT TGAACACTGT GAGAAGACGA AGAAAACAGC CGTCCTGGAC
GAGATTTGCA AGGCCCATAG GAAGCTTCTC GATGACCAGT ACGGCAACTA CGTCATCCAA
CATGTCCTTC AATTTGGCCG TCAGTCTGAC AGAGATTCGA TTCTCCACAT CGTCGTAGAA
AATGGGCTTC TCGGTCTCTC AAGACAGAAA TTCGCAAGCA ATGTTGTTGA AAAGCTTCTT
AAATACGGTA ATGGGTCTCA ACGCAGAGCT ATAGTACGAG AAATGCTCAA GGTGAGTACC
TCACACGATA CTCAATTGGA TTTTACCATC TCGACTTACA TTATTTCTCT CGCACCCACG
GAAGCCTAAC ATTTCGTCAA CTTCCGGATC CGAAAGCTCT ACTGTAGTTC TCTTGATGGT
TCGTGATGCC TACGCAAATT ATGTGGTTCA AACAACACTA GACGTGGTTC CGGAATCTGA
CGAGAAGCGA TTGCTCCTCA AGGAATTGAG TGCACACTCC GAGGAATTAG TAAGAGACCA
TGAACGATTA TGTGACGTTT ACGGTCCAGC GATCTGAAAC TGACAAATTG CCTCGTTTGA
TCGACAGCGC AACTATACGT TTGCAAAGCA TATTGTGACG AAACTTACTA CAATGATGAC
GGAATGA
|
|---|
| Protein sequence | MFQIEGHIVE FCQDQNGSRF IQQRLELGDT SEQQIVMSEV LPAIRRLRND VFGNYVIQKL
LDFGSADMKS EIRNTLESEM LQLSLQMYGC RVVQKALEAL PEEELPRLLM EFHHNVLSCI
HDQNENHVIQ KCVEFLTEQI EFIINDVLVN TKTLSCHPYG CRVLQRILEH CEKTKKTAVL
DEICKAHRKL LDDQYGNYVI QHVLQFGRQS DRDSILHIVV ENGLLGLSRQ KFASNVVEKL
LKYGNGSQRR AIVREMLKVI LLMVRDAYAN YVVQTTLDVV PESDEKRLLL KELSAHSEEL
RNYTFAKHIV TKLTTMMTE
|
|---|
| |