Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11204 |
Symbol | |
ID | 7199633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 787016 |
End bp | 788275 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179064 |
Protein GI | 219116538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GACCCGTCGA GCAAGTCTAT TTCGGGATAC ATGGACTTGG AGGGGTCAAA GTACAACGAG AATGGCGAAG ACAAACACCT TTTCTTTTGG ATGTTTGAAA AGCGCGGCAC ATCGGACGCG AATACACCGT TTATCGTCTG GTTGACTGGT GGACCGGGGT GTTCCTCGAC GCTCGCCTTG CTCAGCGAGA ATGGACCTTG TGAAGTCAAC GAAGACGGCA AGTCTACCAC CGTCAATCCC CACTCATGGA CCGAAAGTGC TCATGTTCTA TGGTTAGACC AACCAGCCGG AGTGGGGTAC TCGTACGGCA CGGAAACGAA CTCGAACGAA GCCATGGTTT CCGAAGACGC CTACTACTTT CTACAGGCTT TCTTTCAAAC ATACGACGAA TATTCCGAGA GTCCCCTCTT TATTGTTGGA GAATCCTACG GTGGACACTA TGGTCCGGCC ATTGCACACC GTGTTTGGCG AGGCAATCAG GAATCTTTGC CCAAAACTAT ACAGCTCAAC TTGTCCGGGC TTGGCATTGG GAACGGGCTC ACGGCTCCCG AAGAACAGTA CAAGTGGTAT CCCGAGATGG GTTACAACAA TTCTCACGGT ATCCAAGTTT TCGATAAGGC TACGTATGAA GGAATGCAGG ACGCCGTCCC CCGCTGCACC AGTCTCATTA AGAGGTGCAA TCAGGGCGAC TCCATGATTG ACAACTTTGC TTGTCAAACG GCCTTTCTTA TCTGCAATGC CGGCCTTACG TCACCCTACC AAATGACTGG CTTGAATCCC TACGATATTC GCAAGGAATG TGGTTCGCAT CCACTTTGTT ACGACTTTTC GCACATTGAA AAATTTCTCA ACGACAAGGC CACCAAGGAG GCTTTGAACG TGGATTTACA GCATTCGCAC GCTTGGAGAT CATGTAATAT GGGCATTAAC ATGAAATTCC ACACCGACTG GATGAAGGAC TTTTCTCCAT TTGTGGCGGA TTTGTTGAAT GCCGGTATTC CCGCGCTAAT TTACGCCGGT GACGTCGATT TTATTTGCAA CTATCTCGGA AACAAGGCGT GGACGTATGA ATTGGAATGG AAGGGCAAGG ACGCATTCCA GGCGGCAGAT GAACACGACT GGAAAGGGAA CGGATTGGCT CGCTCAGCAG AAGGTTTGAC CTTTTTGCAA GTCTACGACG CTGGACATAT GGTGCCTTCC GATCAGCCCG TGAACGCTCT AGACATGATT ACTATCTTTG TCAACGGAGG AGAGTTTTAA
|
Protein sequence | DPSSKSISGY MDLEGSKYNE NGEDKHLFFW MFEKRGTSDA NTPFIVWLTG GPGCSSTLAL LSENGPCEVN EDGKSTTVNP HSWTESAHVL WLDQPAGVGY SYGTETNSNE AMVSEDAYYF LQAFFQTYDE YSESPLFIVG ESYGGHYGPA IAHRVWRGNQ ESLPKTIQLN LSGLGIGNGL TAPEEQYKWY PEMGYNNSHG IQVFDKATYE GMQDAVPRCT SLIKRCNQGD SMIDNFACQT AFLICNAGLT SPYQMTGLNP YDIRKECGSH PLCYDFSHIE KFLNDKATKE ALNVDLQHSH AWRSCNMGIN MKFHTDWMKD FSPFVADLLN AGIPALIYAG DVDFICNYLG NKAWTYELEW KGKDAFQAAD EHDWKGNGLA RSAEGLTFLQ VYDAGHMVPS DQPVNALDMI TIFVNGGEF
|
| |