Gene PHATRDRAFT_11145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11145 
Symbol 
ID7199575 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp478153 
End bp479421 
Gene Length1269 bp 
Protein Length325 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179006 
Protein GI219116422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.860159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCCAGCAAA CCCGACACGC GCGACGACTC TACGTGGGTA ATCTGCCGCC CCACATCACC 
GAAGACGCCA TTCACGTGGA ATTCCGACGA GCCATTGAGA TTGCGTCGCC GACGCCTTTG
TCGGAAGACC CCGTACTCTC GACGTACATC AATCACGAGC GCCGCTTCTG CTTTGTGGAA
TTCAAAACGG TAGAAATGGC CACGGCCTGT ATGAACTTGG ACGGACTGCA CGTGCAGGGT
GTGCCCGTCA AGGTGAAGCG ACCCAATGAT TACAACGCTA ACATGGCTCC CAAGATACAT
CCCAGTGCAC TCCCTCCACT CGACGTCAGC AAGCTCGGCA TCGTTTCGGG AACGGTCGAA
GACGGACCCA ACAAGATTTT CATTGGCGGA CTGCACTACC ATTTGCAAGA CTCACAGGTC
ATGGAACTCC TCCAAGCCTT TGGGAAAATT AAAGCATTCC ATCTCGTTTC GAACGATCCC
GAGTCCAACA TGTCCAAAGG ATATTGCTTT GTGGAATACG CCGATCCAAA CATTACCCCT
ATTGCCGTCC AAGGCCTGAA CGGTATGGAT ATTGGCAACG GCAAAGCTCT CACGGCGCGT
TTGGCGGGAG ATCGCACGGG CGGTGCCGGC GGCGCCGCCT TTTTGGGTAC CACCGCCGCC
ACCGATCCGC TTTCCATCCC GAACGGCCTA CCCGCAGCCG TGGCGACACG TCCGCTACCG
GGCGCTCCCC CACCACCCGA TCGCACCGTT GTCCAAGGGT ACGACGTGGA AACCTTGGTC
GACGCGGCTC TGGGACAAGT GCCCATGCCC ACCGCTCCGA TCTACCAGGA CGCGTTGGGT
ATGCCACTCA CGCGTATCGT GCCGGTCCTC GTGTCGGCCG CGGCCTCCCA CCAAGCCGTC
CCGGCCCTCG CCGCGGTGCC GGCGCCACCA ATGGGAGCTC ACGCAATGGA TCCCCAGAAC
GGCGTGCCGA ATATTCCCAC CCGTGTGTTG GTACTGCACA ACATGGTCAC CGACGAAGAT
TTGGCGACGG ATACCGAGTA TCAGGGTTTG TTTGACGAAG TCAAGGACGA GTGCGCCAAA
TTTGGACGTT TGGAACGGTT GGAAATTCCA CGTCAAGGAC CGGCAGCCCG CAAGGTCTTT
CTGGGATATG TGACTGTAGC GGAAGCAATG CAAGCCCAAC ACGAATTGCA GGGACGGCAA
TTTGGACCCA ACGTAGTGCA GACGACCTTT TTCCCCGAAT CAGAGTTTGA AGCGGGACGG
TTGTATTGA
 
Protein sequence
PQQTRHARRL YVGNLPPHIT EDAIHVEFRR AIEIASPTPL SEDPVLSTYI NHERRFCFVE 
FKTVEMATAC MNLDGLHVQG VPVKVKRPND YNANMAPKIH PSALPPLDVS KLGIVSGTVE
DGPNKIFIGG LHYHLQDSQV MELLQAFGKI KAFHLVSNDP ESNMSKGYCF VEYADPNITP
IAVQGLNGMD IGNGKALTAR LAGDRTGGAG GAAFLAHAMD PQNGVPNIPT RVLVLHNMVT
DEDLATDTEY QGLFDEVKDE CAKFGRLERL EIPRQGPAAR KVFLGYVTVA EAMQAQHELQ
GRQFGPNVVQ TTFFPESEFE AGRLY