Gene PHATRDRAFT_6454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_6454 
Symbol 
ID7198001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp123093 
End bp123674 
Gene Length582 bp 
Protein Length194 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178168 
Protein GI219114745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.679141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCATTGCGT CTATGAAACG CGGTGAAATG GTCGTCGTCG TTGACGATAT GGATCGGGAA 
AACGAGGGCG ATTTCATCAT GGCGGCGGAT CAGTGCACGG AACTAGACAT GGCACGGATT
GTACGCTACT CCTCGGGCGT CGTGTGCATC GCCATGGAAG GCTCACGACT GGAAGAACTA
AAGTTACCGC CCATGGTAAC AAACAACCAA GATCCCAAAG GCACGGCCTT TTCCGTAACG
GTGGATGCGA CCAAAAAGCA CGGTATCACC ACCGGCATTA GTGCGTCGGA TCGGGCCACG
ACCATCAATC TATTGGCGAA TCCCTCCACG GCGGCGATCG ATTTTCATCG ACCCGGACAC
ATTTTTCCGT TGCGGGCGCA AGAAGGTGGC GTGTTGGCGC GGGACGGACA CACCGAGGCC
GCGGTAGACC TATCGCGACT AGCGGGACGG AGTCCGGCGG GGGTTCTTTG TGAAATTGTC
TCGGAAGACA ATCCGACGGA AATGATGCGA CTACCGGAAA TTAGACGTTT TTGTAAGCGC
CACGGGTTCG TGCTGACCAG TATTGTGGAC ATAGCACAGT AC
 
Protein sequence
AIASMKRGEM VVVVDDMDRE NEGDFIMAAD QCTELDMARI VRYSSGVVCI AMEGSRLEEL 
KLPPMVTNNQ DPKGTAFSVT VDATKKHGIT TGISASDRAT TINLLANPST AAIDFHRPGH
IFPLRAQEGG VLARDGHTEA AVDLSRLAGR SPAGVLCEIV SEDNPTEMMR LPEIRRFCKR
HGFVLTSIVD IAQY