| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54257 |
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| Symbol | |
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| ID | 7198080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 900730 |
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| End bp | 902693 |
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| Gene Length | 1964 bp |
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| Protein Length | 419 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178598 |
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| Protein GI | 219115605 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.196942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAGTTTGGTT CCGAACTCCT TGTGTTTGTC GTCTGGTATG CATTTGGATG CCTTGGACTG
GATGCAAGAG AGTTATTGAG AGACCTTGTT GGCATATGGC AAGTTAACGC TTGGAATGCA
CAGCGTGAAC CTGAGACTCC ATTGAGATGA AAGGGACGGG AAGGAAGTCT TTCGCACTAA
CTGTACCACG CTGGCTTTGT ACGAGTGAGC ACGAAACATC GCTCGTCCGC CTTTCCCCCG
TACTCGGAAT TCGACATTGG AGTGAAACCG ACAGCTGCTT CACCTTTGGT CCAATGGCAT
TGAGACTTTC TATCGATTCG GAACGCATTT TCCATTGTGG GCTAGCAGAA TTCTTTTTTT
CTCGGTACAT TGCATTTTCT CGCATCGGGT CATGCTTGCC AGGCTCGTCA GTTCATTTAC
GGCACTCATT TTTTCGCGCG ACACCGTTAC CCAATGAAAA GATAAGAAGT TGATGTGTCA
TCGGATCACG ATTGCGCGGA TACCCCCCAA TTTACTACTC ACTTCCAGCC CTGCCCCACT
TGAATTTATT GTACTCGACT TACACCGTTT TCTTTGAAAT TCTATTTTCG TGTAGAAACA
CCAGCTTTGA GAGTATTGAT ATGAAGTTCG GCAAGAACCT CCGTGAACAA ACCCTCAAAG
AATGGCGATT TTACTCTGTC GATTACAAAG CTCTGAAGAA GAGTATCAGA GTCGGAGGAG
ATGACTCAAC TATTCCCTTT GGCAATGAAT TCTTTAGTAT TCTTGAGGAT GATCAGCGGA
AGATTACCAA GTTTTATCAA GACAAGGAGA ATTGGGCACT TCAGTACATG AAGACTCTAG
AAGAGCGCGT TGCTGACCTC CGTGAAGCTC AAACTGTTGT TCCTCCCGAG TCGCCCACTG
AGCAATTGTC GGAGTCGGAT AGTTCTCTTT CTTCTTCAGA TGAAGATAGT GCTTCATGCG
ACTCACAGTC AGAAAAGGGG CCTGCGAAGT TTTCGGGCTT TCAAATGTTG ACTAAACGCC
AGAGTTTCGG TACCAAACAG GCGTCTTTGA AGGATGAGTA CCGTCGAATG GGTGCTTCTA
AACACTTCAA GGCTTTCATC TACGCTAAAA AGTCCCTCGC AACGTTCAGT CGCGAGCTTG
GTCTGCTCAT CGAATTCCTA AGCCTTAACA AAACAGCGTT CTCCAAGATT CTCAAAAAGT
TTGACAAACG CACGGGATCT TCGATTCGAG ACGTGAAGCT GACTGAGCTT TGTAAGGCCC
TCCCGTTTCT GGACGGGGAT GTTTTCCGTG AACTTAAAGC CGAAGTCGAG AGTCTTATTG
ACGAAGTGAA CGCTCTGAAG CCTGACTTGC CGGAAGGCTG GGAAGATCGA AAGGTCTACA
CTATTGGTTG CTTTGACCTC TTCCATCGTG GACATCAAAA TGTACTCTTG TCACTGCGAG
AGTTTGGCTA TTACATAGTT GCAGGTATCC ACGATGACGA GTCCTATTTC AAACTGAAGA
ATAAGTACAC GATTGACAAT CTCGAGACTC GCATGGCAAA CGCCAAGCCT TTCGTTGACC
AGATCTATGT GATTCCGTCT ACTGATCCGC TTCTATACAT CAAGAGTATG GTCAGTCAGC
AGGATATTGA CATGGGTACT TGTTGCTATG CCAGAGGCGA CGACATGTTG AACTTTCCTG
GTCGCGAGTG GGTAGAATCG GTGATGCCTG TTCATTTTGT GCCGCGTACG GAAGCCTGCA
GCTCTACGCT GATCCGCACT ATCTACCACA GTGAAGATGA AGAGCTCCGT ACGAAGGCTG
CATTTGCCAA GACGCGCTAC GATGGAAAGC CAATTGATGA AGAGGGAAAT GTTCTGAAAT
TCACTAAAGC AGCGGCATGA TTGTAAGAGA AGTGGAATGA ATTTTACTGT ACAATACTTC
AATGGCCAAT TTATGTAGTA GTAACATTAA TACTTCCTTC ACAC
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| Protein sequence | MKFGKNLREQ TLKEWRFYSV DYKALKKSIR VGGDDSTIPF GNEFFSILED DQRKITKFYQ
DKENWALQYM KTLEERVADL REAQTVVPPE SPTEQLSESD SSLSSSDEDS ASCDSQSEKG
PAKFSGFQML TKRQSFGTKQ ASLKDEYRRM GASKHFKAFI YAKKSLATFS RELGLLIEFL
SLNKTAFSKI LKKFDKRTGS SIRDVKLTEL CKALPFLDGD VFRELKAEVE SLIDEVNALK
PDLPEGWEDR KVYTIGCFDL FHRGHQNVLL SLREFGYYIV AGIHDDESYF KLKNKYTIDN
LETRMANAKP FVDQIYVIPS TDPLLYIKSM VSQQDIDMGT CCYARGDDML NFPGREWVES
VMPVHFVPRT EACSSTLIRT IYHSEDEELR TKAAFAKTRY DGKPIDEEGN VLKFTKAAA
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