| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54246 |
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| Symbol | BiP |
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| ID | 7197722 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 739667 |
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| End bp | 742082 |
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| Gene Length | 2416 bp |
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| Protein Length | 659 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | ER luminal binding protein precursor |
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| Protein accession | XP_002178567 |
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| Protein GI | 219115543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAAAGCAAA CAACGCGTCG TCCTACCCAG CGAGCCGCTT TGTTCTCATA CCAGATTACA
CACAGTCATA CCGATTGTAT TCGACTACTC TTGTGTGTTT GTACACAGTT ATTTGTGGAT
TAGCTTTTAA AGAAAGAACA TGATATTCAT GAGAATTGCC GTAGCAGCAC GTAAGTTTGG
AAGACGGCAC AGTCGGGTTT CCAGCGTGGC GGCATTGTGT TCCGTCCGTT CGTACGGACT
CTTCCTTTGG TGTGAAGGAA CGAATCTAAC GGATACTTTG GTTTCTTCTC TCTTTTGATT
GCAGTGGCCT TGCTGGCTGC TCCCTCCATT CGTGCCGAAG AGGCCGGTGA AGAGGCCAAG
ATGGGTACCG TGATCGGTAT CGATCTCGGC ACCACGTATT CGTGTGTCGG CGTGTTCAAG
AACGGACGCG TGGAAATCAT TGCCAACGAC CAGGGAAACC GTATCACTCC TTCATACGTT
GCTTTTATGC CCAGTGGAGA ACGTCTTGTG GGTGACGCTG CCAAGAATCA GGCCACCATC
AACCCCGAAA ACACCGTTTT TGACGTCAAG CGTCTCATCG GACGCAAATA CTCGGACAAG
TCCGTGCAGG CCGACAAGAA GCTCGTCCCC TACGAAATTA TCTCGGATAA GGACAAGCCC
ATGATCGAAG TCATCCAGAA CGAGAAAACC TTCAAGTTCG CTCCTGAAGA AGTCTCCGCC
ATGGTGTTGC AAAAAATGAA GCTTACGGCC GAGACATTCT TGGGCAAGGA AATCAAGCAC
GCCGTCGTTA CCGTTCCGGC GTACTTCAAT GATGCCCAGC GCCAGGCGAC CAAGGATGCC
GGAACAATTG CTGGTCTCAA GGTCGAACGC ATCATCAACG AACCGACTGC AGCTGCCATT
GCATACGGTA TGGACAAGAC CGGCGGGGAA TCCAACGTTC TCGTCTTTGA TCTCGGTGGT
GGAACTTTCG ATGTCACTCT TTTGACCATC GACAACGGCG TCTTCGAGGT GCTGGCCACG
AATGGTGACA CCCACTTGGG TGGAGAAGAT TTTGATCAGC GCGTTATGCA GTACTTCATC
AAAATGATGA AGAAAAAGTC CGACGTGGAC ATTTCCAAAG ACAAGCGTGC GTTGCAGAAG
CTCCGTAAGG AAGTCGAACG CGTCAAGCGA GCTCTTTCTT CGCAGCAGCA GGCCCGACTT
GAAATTGAAG ATTTGGCGGA AGGTTTTGAC CTCAGCGAGA CTTTGACCCG TGCCCGTTTT
GAGGAGCTAA ACAACGATTT GTTCAAAAAG ACCATGGGAC CGGTTGCTCG TGTCATGGAG
GATGCCGATC TCTCCAAGAG CGAAATCGAC GAAATTGTGT TGGTGGGAGG TTCCACCCGT
ATCCCCAAGG TTCAGCAACT CATTAGTGAA TACTTTGGTG GTAAGGAACC CAGTAAGGGT
ATCAACCCCG ATGAGGCTGT CGCCTACGGT GCTGCCGTGC AGGGCGGTAT TCTTTCCGGC
GAAGGCGGTG ACGCGACCAG TGAAATTCTT CTGTTGGACG TCACCCCGCT TTCTCAGGGT
ATCGAAACTG TCGGAGGTGT CATGACTAAG CTCATCAACC GTGGTACCAC CATTCCCACT
AAGAAATCTC GTAAGTTGAT CAAAGCGCCT TATCCGACCG CATTGTGATG GTGTTTCGTT
ACCCCTGTGA CTGACTTTGT TCGTTCCTTT TTTAAAAGAA ACCTTCTCCA CTCACCAGGA
TAATCAGAAC GTTGTTTTGA TTCAGGTTTA CGAGGGTGAG CGTTCTATGA CCAAGGACAA
CCACAATCTC GGAAAGTTTG AGTTGACTGG AATCCCGCCG GCTCCTCGGG GAGTCCCTCA
GATTGAAGTC ACCTTTGAAG TTGACGCCAA CGGAATTCTT CAGGTGTCTG CTGAAGATAA
GGGAACCGGG AAGGCCGAAA AGATCACGAT TACTGCCGAA AAGGGTCGCC TTAGTGAAGA
AGAGATCGAG CGCATGGTCC GGGAAGCGGA AGAATTCGCC GAAGAGGACA AGAAGGTCAA
GGAACGCATC GATGCCCGCA ATGGACTCGA ATCTTACTTG TACAACCTCA AGAATACCTT
GGACGATGAT GAAAAGGGCC TTGCCGACAA TCTTTCCGCC GAAGACAAAA AAGAACTGCA
AGATATGATT GACGAGACCT TGGACTGGAT GGACGGAAAT CCCGAAGCCG ACAAAGAGGA
CTACGACGAA AAGCTAAAGG AAGTTGAACA AGTGGCCAAT CCCATCATGC GAAATGTCTA
CTCCGGTGGT GCCGGCGGTG GCGCCGAGGA TGACGCCGAC TTTGCTGACG ATGAGTTGTA
AACTGGGTAC ATTTTTGGAT CGCCCATTCT TTTACAAAAC AGTTAGATAA CGCAATAAAT
CTTTTCTCAC ACACTC
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| Protein sequence | MIFMRIAVAA LALLAAPSIR AEEAGEEAKM GTVIGIDLGT TYSCVGVFKN GRVEIIANDQ
GNRITPSYVA FMPSGERLVG DAAKNQATIN PENTVFDVKR LIGRKYSDKS VQADKKLVPY
EIISDKDKPM IEVIQNEKTF KFAPEEVSAM VLQKMKLTAE TFLGKEIKHA VVTVPAYFND
AQRQATKDAG TIAGLKVERI INEPTAAAIA YGMDKTGGES NVLVFDLGGG TFDVTLLTID
NGVFEVLATN GDTHLGGEDF DQRVMQYFIK MMKKKSDVDI SKDKRALQKL RKEVERVKRA
LSSQQQARLE IEDLAEGFDL SETLTRARFE ELNNDLFKKT MGPVARVMED ADLSKSEIDE
IVLVGGSTRI PKVQQLISEY FGGKEPSKGI NPDEAVAYGA AVQGGILSGE GGDATSEILL
LDVTPLSQGI ETVGGVMTKL INRGTTIPTK KSQTFSTHQD NQNVVLIQVY EGERSMTKDN
HNLGKFELTG IPPAPRGVPQ IEVTFEVDAN GILQVSAEDK GTGKAEKITI TAEKGRLSEE
EIERMVREAE EFAEEDKKVK ERIDARNGLE SYLYNLKNTL DDDEKGLADN LSAEDKKELQ
DMIDETLDWM DGNPEADKED YDEKLKEVEQ VANPIMRNVY SGGAGGGAED DADFADDEL
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