Gene PHATRDRAFT_51691 details

Gene Information

• Locus tag: PHATRDRAFT_51691
• ID: 7197609
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 983990
• End bp: 984758
• Gene Length: 769 bp
• Protein Length: 225 aa
• GC content: 51%
• Product: proteasome beta subunit
• Protein accession: XP_002178337
• Protein GI: 219115083

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAGCG CCAGTATGAT GGTGCCGGAA GCTTCCTATC CGGGCTTGAA ACCGGGTGAA 
GTTTCGACAG GTACCACCAT TATGGCCATT CCCACAGCGG AGGGTGTTGT TTTGGGAGCT 
GATTCACGCG TTTCTACGGG GACATACGTG GCCAACCGCG TTTCCGACAA GATTGCACAA 
ATGTCTGATC ATATCTTTGC CTGCCGTTCC GGAAGTGCTG CCGATACTCA AGCATTGACC 
GATTACGTCA AGTTTTACTT GCAGCAATTG ACGTACGTAG AACGAGAGAA TACCGGCAGC 
CCCAACCAAC GGACTCTGGT TTAGCAGTCG TTGGTAGCTA ATTGACTTTA TTTTCCTTTA 
CAGTGTCGAA ACAGGACGTC CTCCCCGTGT CAAGACGGCA GCACACCTCA TGCAACGACT 
GTGTTACGAA AACAAGGACA ATTTGATGGC GGGCGTGATT GTAGCGGGAT GGGACCCGGT 
TGACGGAGGC TCTGTCTATT CTATTCCTTT AGGCGGCACT TGTCTAAAAG TTCCGTTTGC 
TCTGAGCGGC TCGGGATCAA CCTACATCTA CGGATTGGTG GATTCCGAAT ACAACGATAG 
CTTGTCTCTT CAGGATGCAC GAACCTTGGT GAAGAAAGCT ATTTCGCATG CCATGGCACG 
GGACGGTAGT TCGGGTGGTA TCATCCGCAC AGTGGCGGTA ACGTCGGAGG GTAACAATCG 
CGACTATACG CCGGGTAATC AGCTACCCTT TGGGCCAGTC GGATATTAG 

 

Protein sequence

MQSASMMVPE ASYPGLKPGE VSTGTTIMAI PTAEGVVLGA DSRVSTGTYV ANRVSDKIAQ 
MSDHIFACRS GSAADTQALT DYVKFYLQQL TVETGRPPRV KTAAHLMQRL CYENKDNLMA 
GVIVAGWDPV DGGSVYSIPL GGTCLKVPFA LSGSGSTYIY GLVDSEYNDS LSLQDARTLV 
KKAISHAMAR DGSSGGIIRT VAVTSEGNNR DYTPGNQLPF GPVGY