| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50808 |
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| Symbol | HDR |
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| ID | 7197607 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 980726 |
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| End bp | 982449 |
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| Gene Length | 1724 bp |
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| Protein Length | 458 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | hydroxymethylbutenyl diphosphate reductase |
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| Protein accession | XP_002178617 |
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| Protein GI | 219115643 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACGAAACAAC ACCCATTCCA GGACGATTTG GTTGCCTTGT TTGTTGTTAT TCCGTAGACT
TGCTTTTCAC GAAACAGAGA CACCCGACAC CACCATCGAA TAGAAGTTGC TTATCATGAG
ATTTGCCTCT TCAGCCGTCG TGTTCATGGC TGTAGCTTCT ACAGTCACTG CCTTCCAGCA
GACTGCTTTC AAGCCGTCGC GTATTTCCAT CGTCGTGCAA CAATCGACAT CCGCAACTGA
AGCTGAGGAA AAGCGGGCTA CAAAGAAAGA GGAACGCTTG CGCATGATGA AGTCCGATCG
CTTCCATCGC CGAGGATTCA AGGAAGTCCG CGAGGGAGTC GAAAGTAACA TGGAAGATCA
ATTCCAGTCG CCAATTGTCA ATAGTTTGCG TACCAGCAAC TTTGTGATGG ATAGAGATGG
TGTCAAGGTG TATCTTGCAA AAGTACGTTT TTCGCACTTT GTCGTTTTTT TTTTAATCAC
AAATCTAACG CACTCTGCTC TTCTAGGATT TTGGATTTTG TTGGGGCGTT GAACGATCCA
TTGCTTTAGC GTACGAAGCT GCGGAACACT TTCCGGATCG CAAACTTCAC ATCACGAATG
AGCTTATCCA CAACCCCGAG GTAAACGAAA ACTTAAAGGC AAAAAACGTT CAGTTCATTG
AGAAGCTCGG AGATGGGACA AAAAACTTTG CGTCGGTTCA GGATGGTGAT GTCGTAATTC
TTCCAGCTTT CGGCGCTTCG TTCGAAGAAA TGGATTACTT TGACAAAAAG GTTAGTCTCA
ACTAAATTTC ACGCGAGTTT TATGCGCAGA CAGATTCTCA AGCTTTCACT TTTGCCGCTA
GAATGTTGAA ATTGTGGACA CTACATGTCC TTGGGTCTCT AAGGTTTGGA ACACAGTCGA
TAAGCATCAG AAGCAAGGTC TGACATCTGT GATTCACGGG AAGTATGCGC ACGAAGAAAC
TGTTGCGACC ACGTCCTTCT GCGAAGACTT CATCTGCGTA AAAAATTTCA AAGAGGCAGA
AATGGTCGCA AATTATATTC TCAACGGAGG GGACAAGGAC GCATTCATGA AGCATTTCGA
AAATGCTGTT AGTGAGGGAT TCGATCCTGA TAAACACCTC GAGAAGGTCG GTCTTGCTAA
CCAGACTACA ATGTACAAGA AAGAAACGCG TGCTATTGGA CAGCTTTTTC AAAAGACAAT
GATGAAAAAA TTTGGACCGG TGAAGTCGAA GGAGCATTAC ATGGAATTTG ACACGATCTG
CGACGCTACT CAGGAACGGC AAGACGCAAT TCACGACATG GTGGAAAGCG CTCAAAAGGA
TGGCTTGGAC TTCATTCTTG TGATTGGTGG TTGGGATTCT TCTAATACTG CGCATTTGCT
TGAGATTCCG GTTCATGCTG GAATCCGCGC CTTCCACATC AACCGTGCAG AGTGCATTGG
TGCGGACAAT ACGATTACTC ATCGAACGGT CGATGGGGAG ATTGTGACGA CTCAATTGTT
GGAAGACATG GACAAGGAAG TTGTTATGGG CGTGACTTCA GGAGCATCAA CACCGGATGC
CGCAGTCCAG GATTCTCTGA GCCAAATCTT TTTGTTGAAA AAGATGTACG ACGAGAGCAA
GAAATAGTAC CGAGTCGCTA ACTTCCCACT TCGGCGATCA ATTCCTTACC ATGCACGCAA
AGGGAATAGA TAATGAATGT ATAGTACAAC TGAAACTTTG TTGT
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| Protein sequence | MRFASSAVVF MAVASTVTAF QQTAFKPSRI SIVVQQSTSA TEAEEKRATK KEERLRMMKS
DRFHRRGFKE VREGVESNME DQFQSPIVNS LRTSNFVMDR DGVKVYLAKD FGFCWGVERS
IALAYEAAEH FPDRKLHITN ELIHNPEVNE NLKAKNVQFI EKLGDGTKNF ASVQDGDVVI
LPAFGASFEE MDYFDKKNVE IVDTTCPWVS KVWNTVDKHQ KQGLTSVIHG KYAHEETVAT
TSFCEDFICV KNFKEAEMVA NYILNGGDKD AFMKHFENAV SEGFDPDKHL EKVGLANQTT
MYKKETRAIG QLFQKTMMKK FGPVKSKEHY MEFDTICDAT QERQDAIHDM VESAQKDGLD
FILVIGGWDS SNTAHLLEIP VHAGIRAFHI NRAECIGADN TITHRTVDGE IVTTQLLEDM
DKEVVMGVTS GASTPDAAVQ DSLSQIFLLK KMYDESKK
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