Gene PHATRDRAFT_44711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44711 
Symbol 
ID7197907 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1357536 
End bp1358776 
Gene Length1241 bp 
Protein Length309 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178411 
Protein GI219115231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.709544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTATTTTTC CGCCCTTGGA AAGGCTGTTT GAGAAACTTT GTCGGGCTTT CGTGTCGTCG 
AAGAACAGTC CTACCCGTGG GGTGTTGTTT GTAGCAACGT CGAAGCGAGC TAGTTTGTTG
CGGTAGTCGA GAAGTGGCGA GAATGAAGTT AGGCAAGGGC CTGGGCTAAT CCGGCTGTCT
TAGCCGGATG TTTTGGTGAG AAAATGGTTG ATTGGGGTCT TCAACTTCCC TTTCAGATGG
GCCTTGAGGC CTACTTGACC TCGCAAGTCA TTGAGGCACT GGACAGAGGC GACCCTGCCG
AAGTTGCCGA TGTCCTTAGC GTCGCTTTTA TCAACAGGAA CGTCTCGCGC GTTATCATAG
GTCAATTACG TCGTCCACGC CCTCCGACAG CTCGCCAAGC ACTGGTACAA CATGCTGTCT
CAAGAGTGGG GTAATTTTGC CCACCAGCGC ATGGAACAGT TGGATCCCTT CGAAACACTA
CGCTTTCACA TGCCCCGGGT CCTCCTTTTG CTGTCGAGTT TACGGGGACG CAACGCGTGG
GATGCTCAGG TATTAGGCCC AATCATGCGT AGATTGCAGG CTTTGAAGCC CGCTGTGGAT
AAATGTCGAG TCAGGCAACG ATAAAATGAT TTCTTTGAAA GTAGCTCATC TCATGCCTCG
GGCCTAAATT CCGGTGGCGG AAAACTTACT ATACATACAA CCAATCCGCC GCTCGGTACA
CGCCGTTCCT TTGCGAGGAG AAGACTTCGG AGTTGATCAA CTTTGGTAAG ACCAAGGTTG
TGCGAGTACC GCCGCAATCC GTTCTTGTCG TCGGAGGAGG CCCAACTGGA CTTATCACGA
CAATTCCCTG TACGGAAGCG TGTTTAGCTA CTGGGGGCAC CATGAAACTC CAGGAGGCTC
GCGATGCTTT TGCGAAAGGA GTATCAACCT TTGAAAGAGC CCAGATTGTT CGACTTGATG
CTCGCTGGAT AGCCATGCTA AGGTACCATC TTGGAAACAT TTTTGAGGAC GTCTACATTC
CTGCTTCCGG GGAAACCGAT GCTCAGTGGG GAAATACACT GTAAGTGAGC ATTTTACTGT
CTCCATTGCT GTTCTAATCA GCCCTTGATA TTAGGTTTCA GTGCCTGGGA AAAAGACGCA
CGGGAGACTT TCTTCAGCAG ACTGTACCAA TGGCGTCTAT TCAAGATGCT AACTTCACTC
TGGATCTCGG ACATACTGAC GTTGTCGAAG CCATCGGGTA A
 
Protein sequence
MVDWGLQLPF QMGLEAYLTS QVIEALDRGD PAEVADVLSV AFINRNVNYV VHALRQLAKH 
WYNMLSQEWG NFAHQRMEQL DPFETLRFHM PRVLLLLSSL RGRNAWDAQV LGPIMRRLQA
LKPAVDKCRL ISCLGPKFRW RKTYYTYNQS AARYTPFLCE EKTSELINFG KTKVVRVPPQ
SVLVVGGGPT GLITTIPCTE ACLATGGTMK LQEARDAFAK GVSTFERAQI VRLDARWIAM
LRYHLGNIFE DVYIPASGET DAQWGNTLFQ CLGKRRTGDF LQQTVPMASI QDANFTLDLG
HTDVVEAIG