Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44705 |
Symbol | |
ID | 7197931 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1329406 |
End bp | 1332035 |
Gene Length | 2630 bp |
Protein Length | 735 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178683 |
Protein GI | 219115775 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTTT CGTTCCACAG CGAAGCTTTG TTCGCTCTCC TCGTCGTTAC CACAATAAAG ATAGACAATG TGTCGGGGAC TCTGGCGTCT CCATTTCCTT TCGAAGAACT CAACGCAGAT GGCTCCCCGA CGGGCGAAAT GTACGTCTTT GGCGGACCAG GTAATAGCTG GCTCGAGGAC AAGAACGGGT TCACTATCTG TCCCGTAGTC ACGCACCCCG ATAAAATCCC CCAACAGCTC TCCAATGAAG ATTCGGTCGG CAACGCTGAT CCGGAGACGA CCTTTTACTA CTGTGGAAAA GATAAGAACG GCGACGTGGT GCCTAGAATG GATCTTCAAG TAGGAAGAGA AAGTCCTCAA GCCTCCGGCC TTAAGCCAAA CGTCGGAAAA AACGAAAATC AGATCGAGGA GGAGTGTGGG GCTTTTTGCG AGGTGGACGA CAGCGGACGC CGACTAGGAG AGTTCCGCGG CAGTCATCGC AAGCTCCAGG GCACCCTGAA GAACCTGGTG GTTCTAATGC GATTTAGTGA TCACTCTTCT CGTAATTTTC TCCCAACTGT CGCGGAAGTA GACGACCTTA TGAATGCTGA AAGTCCTACT GCATCATGTC CTACTGGAAG CGTTAAACAG GTGTTCCTGG AGAACAGCAA CGGCAGATTG ATTCTTGATT CCACCGTTTA CCAATGGGTG ACCCTTGACC CCGTATACAC GGAGACATAC TGCGCCAACG ATAAGTCTGG TCTAGATGTG CGAATCCACG AGTGTATTGC GAATGCACTG GACAAAGTTG AAGCTGGCGG ATTGGACTTT CGTGACTTTG ACCAGGACAA CGACGGGCTT ATTGATGCGA TCACTTTTCT ACACTCGGGC TACGGAGCGG AATGTAAGTG TCGTCAAGTG AATATAGCGT GGTCGACATA GACCACACAC TCTCACTTCT TGCTTTGTAA TCTTCTATAC CTCAGGGAAT GGGGCCAGCA ATCGGATCTG GTCTCACAAG TGGTCGCTGT TTACCATCGA GGATGGGGGC GAGGCCGGTT GGACATCCAG CGTTGGCGTA AGTGTCTTCA ACTACCATAT TAATCCATCT CTATGGGGAT CTACTGGTAC AAGCATTGGT CGTATCGGAG TAATAGGTAC GCAACAGAGC AATTAAAGGA GGCAGAAGCT TTACAGGAGC ATTATTGTGT CTTTTATTTC CAGCATCCTG TGGTACGGAT GATCTCACCA AATACTTTAA TATCCACCAT AGCACACGAG ACCGGTCACT TCTTAGGACT GCCTGATCTA TATGATATAG ATGGAGGGGG AAAGGGGCTG AACTCCTGGA GTCTTATGGC AAATAGCTGG GGATTTGATA GTTCGCAGCT ATATCCACCC CTATTAGATC CGTGGTGCAA GATCCAGCTA GGCTGGGTGA CGCCTACAGT GCTGACGGAA ACCTCCAGGA ACATTGAGAT CAAACCTTCG TATACTGACG ACGACTACTA TATCATTCAA AGAGGATTCC CCGAGGATGA GTTCCTCCTG ATTGAATATC GTCGCAGGGT AGGATACGAC AGCCTGATTC CCGAGGTAAG GTTGTGTATT GCGTCCCAAA GGGAGTGACA GATGATTGGT TATCCAAACT GCCTTTCTGA AAATGTTCTT TGATTGCAGG AAGGGCTTCT GATCTACCAC ATTGATGACA CTGCTAGTTT CGATCAAGAA GGGTTTCCTG GACAAACGGG TTGGCCTGAA AATGGCAATC ACTATCGTGT AGCTCTCTTG CAGGCCGATG GCGAATATGA CCTGGAACAG TTTCTAGATT CCGATGCTGG GGATGTCTTT CGGGGTGGAA GGGATGGTGC TTCTTCTCTC GGCCCTGGCC CTGATATCTA CCCAAATACC GACAGCTACC AGTCTGGAAG TGTAACCAAA ACGGGCATCC TGATTGAAAA CATAAGTTTG GCAGGAGATA CTGTAACGTT CGATTTCGTG TACGAGGAGG AAGGCGTCCC GTCCTTAATG CCCTCCGGCG TCCCATCCTT AATGCCCTCC GGCGTCCCGA CAGCTACTCC AAGAGAACCA ACAGCTTCTC CAAGGGAACC AACAGCTACT CCAAGGGAAC CAACAGCGAC TCCTGGGGAA CCAACACCTA CTCCAAGGGA ACCAACAGCT TCTCCAAGAG ATCCAACAGC TTCTCCAAGG GAGCCATCAG CGACTCCTAG GGAACCAACA GCGACTCCTA GGGAACCAAC AGCTCCTCCC TCATCTGTAC CGACTACTCA GCCAACAGGG GTGCCGTCTT TCATGCCGAC GGCGGACTTT TTTTCCTCGG TACCGAGCCA TCAGCCCACT CGGGTTCCCA TTACCCTTCC TACGAATATG AATAATAGAG ACAGAGGCAA CGGTATGAAA AGGAATCGAA TGAGCGCGAA CGTGAATAGA AACAGACAGA GATTATCCAA TTTATAAAGA TAAGGACAAG CCTAGACTAT TGCGTGCAGG ACTCGGTGCA TCAGCCGAAT CGAAATCCGA AGTTGCAAGT CGGCTGTTCA AACAGTTACG GTTCGTAGAA TTGACTGTGA GTGAAAAACA CAAAGAAAAG TAAAAAACTG TAAAAAAGTC TAAGAAGCAA CAAGACAGCG
|
Protein sequence | MKFSFHSEAL FALLVVTTIK IDNVSGTLAS PFPFEELNAD GSPTGEMYVF GGPGNSWLED KNGFTICPVV THPDKIPQQL SNEDSVGNAD PETTFYYCGK DKNGDVVPRM DLQVGRESPQ ASGLKPNVGK NENQIEEECG AFCEVDDSGR RLGEFRGSHR KLQGTLKNLV VLMRFSDHSS RNFLPTVAEV DDLMNAESPT ASCPTGSVKQ VFLENSNGRL ILDSTVYQWV TLDPVYTETY CANDKSGLDV RIHECIANAL DKVEAGGLDF RDFDQDNDGL IDAITFLHSG YGAEWNGASN RIWSHKWSLF TIEDGGEAGW TSSVGVSVFN YHINPSLWGS TGTSIGRIGV IAHETGHFLG LPDLYDIDGG GKGLNSWSLM ANSWGFDSSQ LYPPLLDPWC KIQLGWVTPT VLTETSRNIE IKPSYTDDDY YIIQRGFPED EFLLIEYRRR VGYDSLIPEE GLLIYHIDDT ASFDQEGFPG QTGWPENGNH YRVALLQADG EYDLEQFLDS DAGDVFRGGR DGASSLGPGP DIYPNTDSYQ SGSVTKTGIL IENISLAGDT VTFDFVYEEE GVPSLMPSGV PSLMPSGVPT ATPREPTASP REPTATPREP TATPGEPTPT PREPTASPRD PTASPREPSA TPREPTATPR EPTAPPSSVP TTQPTGVPSF MPTADFFSSV PSHQPTRVPI TLPTNMNNRD RGNGMKRNRM SANDSVHQPN RNPKLQVGCS NSYGS
|
| |