| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44703 |
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| Symbol | |
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| ID | 7197930 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 1322562 |
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| End bp | 1327088 |
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| Gene Length | 4527 bp |
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| Protein Length | 1453 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178682 |
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| Protein GI | 219115773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.816493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGGCT TTGGATCTTC ACTCCGCATA GCACGTCGGT CCGGCTGGGA AGGAGCCTAC
CTCGACTACG AAACCCTCAA ACTCTTGCTT TCGCAAATCG AAGCCGTCTA CGAAGAAGAG
ACGCACCGCC AAACATCGCA CGAATGGAAC GTCTTGGGCG AACAAGAAAC CGCAAGGGAC
TATCGGGAAG AATTGTTTCT GGAGTCGGAC TCGGACGAAG AATACGCGTC CCTGGAAGAC
GATGTTGACA TCAACGACAA CGACGATCTT TCTGCCGGTA TGGGCGCAGC CGACGAATCG
GGACAAAACG TCGACTTTTC AATGGGAACG TCGTCCCGAT CGAGCAAACC CTTCAAGTTG
TCCTATTCCC ACGAAGCCAC CTCGAGTGAC GAGGAAGAGG ACCAGGTGGA CGTTGGCTGT
GGAGCCGGTA CCTTGAGTTC CTGGACACCC CGGACCTGGG ACACCAGTAA TATTACTCGC
AAAAAGCCAC CGTACCAGCA GCAAGGCGGA AACGCCGCCA AACGCAAGGC TCATCGGTTG
CCACGATTGA GAGAAGACGA CGACTTCTAC GCGAGCGCTG GCGGAAGTGG CCACGCGATT
GGGGGAAGCG GCGTTCGCTC AGGGATCGGC ACTCTTCCCT CTCACGGAAC AACGCTCACC
AACAATACCG CCACCCAAGC ATTTTACATG GCTGGGGGTT CCGGCAGTGA CAGTGCCGAG
TATTTGCAGA CCTTGGGAAG CTCTCACACT CCGTCCATTC TCAACGCCCC CATACGTAGA
ACGGGCGAAA GTGCGTCATT GCTGCCACCC ACCACACCAT CCCAATCGAA TGCGTCCTGG
TATACGTTCC ATACATCTCC ATCCGTACGG ACGAGTCACA ATATGGACAA TACAACTCCA
CCGCACGTAA CTTCAGCAGA TTTTCTGCGA GACAACCACC TTCTACCCGA GAGCATCAAT
CTCACACCAC CATTGTCCGG ACGCATGAAC CACCGGGGAG AGGACGAACG TAATCGCGAC
CGCGTCGCTC GTCGCAAACG TCGGCACAGA CTCCGTGCCA TACGCAAACA GAAGGAACGG
AAGGTACCCC GGCACATTCG TGTCGCACAT TCCAAAGCTA GGGCCATTAC GGAACGGTTC
CTGGGATTAC TGCGAGCCGA AACAGAAAAG GTCATGTTGT TTGCTCAGTC GAGATTGGGA
GAATTGGCCG ATACAGCTGG TAGTTTGCGC TTTCCTTCGA TCGATGAGAT CGACTATGTT
CCACACCAAA CACAGGGCTC GGCCGCCTAT GATTATCGCC TTACCGACGG TGGGATGCAC
CCTTCGGCAT CCTCTTCAGA AGACGACGGC CCGGCAGGAG CATGTCCCTG GTCAGACAGC
TCGGACGAAG AAGACGCGAC TACTGCCAAC AACGGTCGCG CAAGTCCCCG TGAAGGATCG
TACATAATAC CCAAAGGTCA CCTGTCGGAA GAAACTTTGG GACGAGCTAA TCCCAGCGCG
TCTAAAAGTG TTGCATCTTC CGCCAAACAG CTCAAACGGG CGGCCAAAAT TAAGGAGAGC
AAAGGCCAGC GAAATGTTAA GCAGCACGCG GAAACGCTGT CATCCGTGCA GCGACAGATT
GCTCATTTTG CTCGCCTACG AAAAAATAGA CCTGTCTTTC AACGGAATGA CCAAATTCTT
GGGGAAGATA TGTTGCTGAT ATCGGCCGTG GAAGAGGCGG ACGGCTTTAC CGCCGTGGGG
GTAGAACTCA TGCACGTGCT CCGCTACATT TGTGTCAACT TGATTGCCGT TCGCAAAATA
TGTCGCAAGC ATGATCGTCT CCTGATGAAT CGAATGCTTG GAGGATACTA TCACCGCACA
AGGAATTTGG GGCACGATCG GTACGCCCAC ATAGAGGATG TGCAAACCCT GGGTGGTCTA
CTGGCACGAG TTTCTGGCGA TATCTACGAA GCTCATCCAG CGTTGATTGG GCATATGACG
TATTATAAAC TCGTGGGAGT GTACGATCGA AAGGTCCAAA AGCTAGCAAA TTCACGTACC
GTGCAAGTAA TTTCTGCCTG TCTGGCCCTG GCCCTATCAG AGCACGAAAT AACACAGTCG
AGAGCCGAGA AGCTGACCAA GATCCAGTCT ACAACGTCAT CGGACACTCC AAAACGATCA
GGACATGGCG GCACCTTGTC ATGGGTACAA GGATTGAAGA ACAGCTTGTT TCAGCCAGCT
GTAAAATCCG ACGATGAAGA AGATGACGGG CCGCCATCGA CGACTTCCAC GGTATCTTTG
ACAAGGCTGC GATTCACTGT CACATCAATT TTTGCTTTGC GAGAAGCAGC TCGATACAAA
ATGGACCATT ATGCTACATA CTTGTCTAGA TCGTTGATTT CGTTTACAGG ACAGCCCGCT
GCCGGCGAAG GACTGGACGG CTGCTCGCGA GTGACTCTCG ATTTTTTGGT GTCGTACAAT
CCCGATGCAG CATTGCTTTT CGACTCTTCG GTACTGTACA ATGGTATCAA GCACGGACTT
TGGCTCGGTG AACCTGTGAG TGAGGTCATG GTCTCAACGT TGGCAGCTGC TACAAGTCCA
GATCCTGCGT TTCTGCTCAA TGGTTCATCG ACACTAAGTC CGGAAGAGCT TGCGGTGGCA
AATGCAGTCA GCATCGTACC CGGACCTAAG AACTTGTTCC TCCAAAGTTT TTTGAAGGGA
CTTCTTCCTA AACAACTTGC TGTGAAGGGA AGTCCGAACA TATCAGAGGC TCCATTGAAG
ATCTTGCGAT TAAGTCAATT TTCATGCTTT CTTTATTCGG TAAGTTTATG CTGCCTTTTT
CCGACTGAGA CTACGCTTCA GAGTTCATTA CGACTCACAT TATATTGAAT CCCTCTATCC
AGATGAATTA TTTTGTCGCT CATTCGAGTA CAAATACTTT TACGCACGCG ATGGGGGCTC
ATTCAGCCTA TTCCTCTGTG ATTATTGGGA TTCCTAATGT GGCAGCTATC ATCGTCGCGG
TCATACATGT ACAAGCAGTT GCTTCGGAAA AGACCGCTGG GCGGTTTCCC AGAGACAGTA
CAGGTCTTCT GCGTGGTTGT TTTCTGGTAT CTGCAATCAT GGGCGTGCTT GGAAACATTG
CGCACAGTCT CGCGATCGAA AAAGAATGCC TAGCACTTGC GATATGTGGA CGTTTCCTCT
TGGGGTTTAG CTCCGCCGAG ATATTGCATC GACAGTTGTT GTCGACTTGC TTGCCTGCGT
ACATCGTTTC AGAATCATCG ATGCTTGTGC AGCTTCGAGC AGTCGGCACT GTTCTTGGGC
TTATCGCCGG CACAATCATT GAATCCTTGC CGATTTCCTT CGATGCACTC GGAATTCGCG
TCCTTCAAAC ATCGGGCTGG CTGATGGCAG TCCTCTGGAT GACTCAACTG ATAAATCTAT
TATTGAGCTC AGGATTAGTT GAAGGGCGGA TGAAAGCTTT AGGGTGCGAT TTTTCGGTAC
TAGAGGGACA AGAGATCAAT GGTCCTGCAA AAGCTTCGAG TGTCGACTAC AGTTCCGACT
CATCTAGCTC CGTTGAGCCA GGAACACCTA CGAGCGTACT GTACCGATCT TCTTCAGACG
TTACGTCCCA TGATCCTTTC ACTATAGCCT ACGGGAGTCA GCAAGAGGAG CAAATAATGT
CAGACCAAAA CACTGCCAGC ACGGAATCGA CCCCTCTAAA GACTTTTGAT CACGGCATTC
GACGACGGCC CTTTCGCCAA ATCACCACAT TTTTTGCTCG AACAAAGAAG CTGCTTGCAT
TTCATATTGC AATCCCTATA TCTTTGGCAA TTCTCCTGTA CACTAGCTAT GCCACTGAAG
TATTCTTCAC CGCCACTCCG ATTGTTGTCT GCCGATACTT TGGATGGAAC GGTGATCATG
CCGGCGTCTT TCTCGGCGGC CTCGCTCTTT TGGTTCTCCC GACCTACTTT GTATGTGAGT
TGGTGGCTCG ACGATACGAG GAACGTACTG TTCTCAAGGT AAGTCGATAG CAAAATTGCG
GCGGTACGGA ATCGTTGGCA ACCTGCGATG GCCAATTTTG ATTTCCTGTT CCTTCTACAG
CGATCACTGC ACGTTATAAG TTGGGGGCTG TTTTTTATGA TTAATTGGGT AAGCATATGC
TCACTGGCGG GGCGGTTTTC AAGTCTGCTA GCGGAGAGGC CTGACGGTCC CATGGCTCAC
CCTTACGACT GGAAGTTGGG AGTCTTCCAG TACGTGATCG GATTGACGTT TACCTTTATT
GGTCTCACAT CGCTCGAGGG GGCGGCCCAG GCACTGGCAT CTAAGGCGTC ACCGTCTCGG
CTAAGCAGCG TGTCGGTACA TGTGAGTAGT CTCGCTGTCT TTCTTTCCTT CACTGGCCGC
ATCTTTGCCG ATGGTCAAAT CTTTTTTGTG GAGCTTTCGC ACAAGCTGAT AAATGTGGAC
ATTGTGAACT CGCTGGTCGT TCCAGTATTC TTGGCTTGCT TTGTCGGCCT GTATTTTGTA
AAAAAACACT ACTTTTTCCT AATGTAA
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| Protein sequence | MVGFGSSLRI ARRSGWEGAY LDYETLKLLL SQIEAVYEEE THRQTSHEWN VLGEQETARD
YREELFLESD SDEEYASLED DVDINDNDDL SAGMGAADES GQNVDFSMGT SSRSSKPFKL
SYSHEATSSD EEEDQVDVGC GAGTLSSWTP RTWDTSNITR KKPPYQQQGG NAAKRKAHRL
PRLREDDDFY ASAGGSGHAI GGSGVRSGIG TLPSHGTTLT NNTATQAFYM AGGSGSDSAE
YLQTLGSSHT PSILNAPIRR TGESASLLPP TTPSQSNASW YTFHTSPSVR TSHNMDNTTP
PHVTSADFLR DNHLLPESIN LTPPLSGRMN HRGEDERNRD RVARRKRRHR LRAIRKQKER
KVPRHIRVAH SKARAITERF LGLLRAETEK VMLFAQSRLG ELADTAGSLR FPSIDEIDYV
PHQTQGSAAY DYRLTDGGMH PSASSSEDDG PAGACPWSDS SDEEDATTAN NGRASPREGS
YIIPKGHLSE ETLGRANPSA SKSVASSAKQ LKRAAKIKES KGQRNVKQHA ETLSSVQRQI
AHFARLRKNR PVFQRNDQIL GEDMLLISAV EEADGFTAVG VELMHVLRYI CVNLIAVRKI
CRKHDRLLMN RMLGGYYHRT RNLGHDRYAH IEDVQTLGGL LARVSGDIYE AHPALIGHMT
YYKLVGVYDR KVQKLANSRT VQVISACLAL ALSEHEITQS RAEKLTKIQS TTSSDTPKRS
GHGGTLSWVQ GLKNSLFQPA VKSDDEEDDG PPSTTSTVSL TRLRFTVTSI FALREAARYK
MDHYATYLSR SLISFTGQPA AGEGLDGCSR VTLDFLVSYN PDAALLFDSS VLYNGIKHGL
WLGEPVSEVM VSTLAAATSP DPAFLLNGSS TLSPEELAVA NAVSIVPGPK NLFLQSFLKG
LLPKQLAVKG SPNISEAPLK ILRLSQFSCF LYSMNYFVAH SSTNTFTHAM GAHSAYSSVI
IGIPNVAAII VAVIHVQAVA SEKTAGRFPR DSTGLLRGCF LVSAIMGVLG NIAHSLAIEK
ECLALAICGR FLLGFSSAEI LHRQLLSTCL PAYIVSESSM LVQLRAVGTV LGLIAGTIIE
SLPISFDALG IRVLQTSGWL MAVLWMTQLI NLLLSSGLVE GRMKALGCDF SVLEGQEING
PAKASSVDYS SDSSSSVEPG TPTSVLYRSS SDVTSHDPFT IAYGSQQEEQ IMSDQNTAST
ESTPLKTFDH GIRRRPFRQI TTFFARTKKL LAFHIAIPIS LAILLYTSYA TEVFFTATPI
VVCRYFGWNG DHAGVFLGGL ALLVLPTYFV CELVARRYEE RTVLKRSLHV ISWGLFFMIN
WVSICSLAGR FSSLLAERPD GPMAHPYDWK LGVFQYVIGL TFTFIGLTSL EGAAQALASK
ASPSRLSSVS VHVSSLAVFL SFTGRIFADG QIFFVELSHK LINVDIVNSL VVPVFLACFV
GLYFVKKHYF FLM
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