Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44670 |
Symbol | |
ID | 7197654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1221942 |
End bp | 1223006 |
Gene Length | 1065 bp |
Protein Length | 317 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178664 |
Protein GI | 219115737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.724051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTCTGGATC GGAGACTACG CCAAACTTGA ACCAGTGGGA GCGAGCAACA GCAGCAGCAC AGCCCGCACC CGCGGCAACA CTTACTCACA GTCATCCACG GTTCCGTAGT CATGGTAACG CCGGCTGTCG GGACCAAATT AGCTCGCCCT TCGCCGTGGC GCGTCTGGGT GACAGCCGCC CGTCCGCACA CCATTACCGC CAGCGTCAGT CCCTGCCTCG TCGCCTACGC CAGTTGTCGG CCGTCGTGGG ATCTATTCCT GGCCTGGCTC GTCTTTTGTA TTACCGTACA GATTGGTACC AATCTGCACA ACGACTACAG TGATTTCGTA CAGGGAGCGG ACGATGTCGA TACACGGGTC GGCCACGCAC GGGCCACCGC ACAGGGCTGG TGGACTCCGG CGCAAACCTG CCGAGCCTCC GTGGGAGTCT TATCCGTTAC CTTTGCCAGT GGTGTGTATC TAGCCGTGGC AACCGGACAA ACCAAAAACG CATTCTTTTG GTTCCTTGTA TTGAGTAGCA TTTTCAACGC ATTCGCCTAC ACGGGTGGGC CCTTCCCACT CGGATACATT GGTCTCGGAA GCTGGAGTCT CGCTTACAGC GGGCTCGGGG ATCTCTTTGT CCTCCTATAT TTCGGATACG TCGCAATACT TATGCTACCC TATCTACTCT ACCGACAAGG CCAAGAAGTC GCCTGGCCGG CGCAATGGCG CTACGGCACC CAAGTCGGAC TCCTCGCCGT CACTATTCTC ATCGTTAACA ATCTCCGCGA TCGTCACACG GACCAGCGTG TCCACAAACG CACCACAGCC GTCCGTTTCG GCCGGCGCTT TTCACTTGTA CAGTATTACT TCTGCATCCT CGTCAGCTAT CTGTTGGTCC TTGTCGATGC CTACCAGGCC AATGCGTTGG GACGGTTGCT GCCCCTGCTC AGTCTCCCCC TCGCCGCCCG CCAACTCGTC GCTGTAGGGT TGACCGAAGG CGCGGCTCTC AACCCCTACG TGGGGGGTAG CGCCCAGACC CAATTGTTCT TTGCGATACT CCTCGCCTGT GGCCTGGAGT GGTAG
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Protein sequence | MVTPAVGTKL ARPSPWRVWV TAARPHTITA SVSPCLVAYA SCRPSWDLFL AWLVFCITVQ IGTNLHNDYS DFVQGADDVD TRVGHARATA QGWWTPAQTC RASVGVLSVT FASGVYLAVA TGQTKNAFFW FLVLSSIFNA FAYTGGPFPL GYIGLGSWSL AYSGLGDLFV LLYFGYVAIL MLPYLLYRQG QEVAWPAQWR YGTQVGLLAV TILIVNNLRD RHTDQRVHKR TTAVRFGRRF SLVQYYFCIL VSYLLVLVDA YQANALGRLL PLLSLPLAAR QLVAVGLTEG AALNPYVGGS AQTQLFFAIL LACGLEW
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