Gene PHATRDRAFT_44670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44670 
Symbol 
ID7197654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1221942 
End bp1223006 
Gene Length1065 bp 
Protein Length317 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178664 
Protein GI219115737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.724051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCTGGATC GGAGACTACG CCAAACTTGA ACCAGTGGGA GCGAGCAACA GCAGCAGCAC 
AGCCCGCACC CGCGGCAACA CTTACTCACA GTCATCCACG GTTCCGTAGT CATGGTAACG
CCGGCTGTCG GGACCAAATT AGCTCGCCCT TCGCCGTGGC GCGTCTGGGT GACAGCCGCC
CGTCCGCACA CCATTACCGC CAGCGTCAGT CCCTGCCTCG TCGCCTACGC CAGTTGTCGG
CCGTCGTGGG ATCTATTCCT GGCCTGGCTC GTCTTTTGTA TTACCGTACA GATTGGTACC
AATCTGCACA ACGACTACAG TGATTTCGTA CAGGGAGCGG ACGATGTCGA TACACGGGTC
GGCCACGCAC GGGCCACCGC ACAGGGCTGG TGGACTCCGG CGCAAACCTG CCGAGCCTCC
GTGGGAGTCT TATCCGTTAC CTTTGCCAGT GGTGTGTATC TAGCCGTGGC AACCGGACAA
ACCAAAAACG CATTCTTTTG GTTCCTTGTA TTGAGTAGCA TTTTCAACGC ATTCGCCTAC
ACGGGTGGGC CCTTCCCACT CGGATACATT GGTCTCGGAA GCTGGAGTCT CGCTTACAGC
GGGCTCGGGG ATCTCTTTGT CCTCCTATAT TTCGGATACG TCGCAATACT TATGCTACCC
TATCTACTCT ACCGACAAGG CCAAGAAGTC GCCTGGCCGG CGCAATGGCG CTACGGCACC
CAAGTCGGAC TCCTCGCCGT CACTATTCTC ATCGTTAACA ATCTCCGCGA TCGTCACACG
GACCAGCGTG TCCACAAACG CACCACAGCC GTCCGTTTCG GCCGGCGCTT TTCACTTGTA
CAGTATTACT TCTGCATCCT CGTCAGCTAT CTGTTGGTCC TTGTCGATGC CTACCAGGCC
AATGCGTTGG GACGGTTGCT GCCCCTGCTC AGTCTCCCCC TCGCCGCCCG CCAACTCGTC
GCTGTAGGGT TGACCGAAGG CGCGGCTCTC AACCCCTACG TGGGGGGTAG CGCCCAGACC
CAATTGTTCT TTGCGATACT CCTCGCCTGT GGCCTGGAGT GGTAG
 
Protein sequence
MVTPAVGTKL ARPSPWRVWV TAARPHTITA SVSPCLVAYA SCRPSWDLFL AWLVFCITVQ 
IGTNLHNDYS DFVQGADDVD TRVGHARATA QGWWTPAQTC RASVGVLSVT FASGVYLAVA
TGQTKNAFFW FLVLSSIFNA FAYTGGPFPL GYIGLGSWSL AYSGLGDLFV LLYFGYVAIL
MLPYLLYRQG QEVAWPAQWR YGTQVGLLAV TILIVNNLRD RHTDQRVHKR TTAVRFGRRF
SLVQYYFCIL VSYLLVLVDA YQANALGRLL PLLSLPLAAR QLVAVGLTEG AALNPYVGGS
AQTQLFFAIL LACGLEW