Gene PHATRDRAFT_44623 details

Gene Information

• Locus tag: PHATRDRAFT_44623
• ID: 7198113
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 1076152
• End bp: 1078372
• Gene Length: 2221 bp
• Protein Length: 606 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178637
• Protein GI: 219115683

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCTAGAGATC TCGCGAAATT CGAATTCAGA ATTCAGCTTC TCTCTCTTTG CTTTACCAGT 
GTCACCGGTA TTCCTTTTCT TCTTTCGTAA AGGCTCTTTT ACGGTACCGA TCCGACGTTG 
ACGTAGAGAC AAAAAATGAA CAGTTGGATG CGTTGCTGCC ATTACCAGGA TTACTACTAG 
ATCCCTCTAC TTTTCCAGTG TAACGAGCCA TCCTCAATTT CTAGACGACC AATCTCCCTT 
GATAATTGCC GTGCACCGGC GCATCAGCGT AACGCAGACT CTGATCACTT GTTATCCTCC 
TCCTGTACAG ATCAAGCCGT ACTACGTTTC GACGGTTTAC ATTCGCATCT TTTATACTGC 
CTGCACTCTT TTACTCATAT CCACACCCAC ACGCACAGTC ATGTCGGCGG TTTCGTCTAC 
TCGCGAGCGC CGCGCGACTG CTGGCAAGCG CATGAGCGCA CTCGTGGGCC AGGCCTTGGA 
CGATGACGCT GCGTTTTGGA ATCACGACAC CTGGGCCGAC GAGCACGACG CATCTGGCAA 
CGAGAGTTTC CGAGAATCGG ACGAAGATTC GACGGCTCGC GTCGATGCTT TTGATTCCGA 
TTTCGACGAT AGCGAAAGTG ATCACGAGCA GCAGGAACAG GCGGCGGGTG CGGAAGAAGA 
ACGGGAATTG CAAAAAACGG AGCGCGGCAA CAAAAAACGA AAACTGTTTG GTGCGGGGCA 
GTACGCGGAT ATCGCCAAGG CGGGTCGCGA CCGTATGCCC AAAAAGAAGA AAGTCGGCAA 
TCGCGTAGTG GGAGACGGTG TCAATGCTGG TATTGTTCTC AATGTACCGA ACGCTCTCCC 
TCGCGGTCCA GCACAGTATT TCGTTGCTGG GGTTTCGAAA CCAATACCCC CGACCACTAT 
TAGTTCCCTC CAAGCGAAAC AGTCCGCGGT CTTGGGCATT CGACCGAGGC GGGCTGGGCG 
GCCGTCTTCT CGTTTCCGAA CTTCCCGGGG AGATTCAGCA CCATCCATGA CGATCAATGG 
TAAACCAGAT GGGTCGAAAA AGCGGCAACC TAAACATAAC TTTACGCAGG AAGAATTGCT 
TCTAGAAGCG GCGCTCGAAA CGGAACCGGA AAACCACCGT TGGCTACTTT CACGCCAGCG 
AATCCAAGAT CAGCAAGACC GTGATGCCGG TCCGAACGAC CGAAGCCACA GACGAGGAGG 
ACGGGTAATT GAGAGTTATG TCTCACGAAG AGGCGCCCCC AATACAATCA CATTCCCCGA 
AATGGATTAT GTACCAGAAA TTTTGACGCA ATCCTCTAGC GCGATGCTCG AACGGCTCCG 
GATACCGACC TTTTGTGTCG TTACGGGAGA GCGGGCCAAA TATAAAGATC CACTGACTGG 
TTTAGAATAT TCCAACGCTG CTGCATTTAA AGAGCTGCGA CGGCGGCATG CTTCTGGTGA 
GCTGAAGCCA CAGTCGTCCA AGCCCAAAAC AAAGAAAACG TTGTCAAAAG CCATTTCCAC 
GAAAGCAAAT GTTGGTAAAG TTGCCAAACC GATCCCTTGT GGCGATGGAG TATCCACGGG 
AGCGAGCAAC GCAAGCTCGG AGCATGGGCA AAATGGAGAG GGGTCTGTCC CTGCGAAACC 
AGCCGACTCA AGGAATACTT TAACAGAAAG AGCGAGCAAA TTGAAGCGGG CAGCAACTGT 
GACATTGTAC GGGACCTCTC CAATTTCGTC AGAATTGGAC ACAGCGGAAA GAGAGCAACC 
GGAAGAACCA CATTTATCAA CTACGCCACC GACAGACAAG TCACTTCCAT TTTCCGACGA 
TTCGAAAACA CCGTCACTAC CAGCTTCCAT CGCGCCGAGA ACAAATATTA AACTACTGAC 
CAAAGGTGGC GATGCTGATG CTTCCACCGA AATACGAGAA CCTTTGAAAA GTCCAAAAAT 
AGTATCGTTC CATGTCCTTT CCGCTTCCAA ATCGTCCGCC TTCGCGTCAC AGAATCATAC 
AATCTCTACG GCAATCAACT CACCAACGAG ATCGGCCACT TCACCGCCTT CGGCTCCTCA 
CACAACATCT TCCGCTCGCG GTTCTCCCGA TATTTCAGGT CACCGTAGGG CTTCGCCCCG 
TCGACGTAAA CCCAGCAGCA AGCTTTTGGA AACTGAATAT ACGCCTTTGG CCATTCCGAA 
CTCATCCTCA GGGGAAGAAG TCGACAAGTC GTCGATACCT TTCGAAACGA ACGCTTTGTA 
G 

 

Protein sequence

MSAVSSTRER RATAGKRMSA LVGQALDDDA AFWNHDTWAD EHDASGNESF RESDEDSTAR 
VDAFDSDFDD SESDHEQQEQ AAGAEEEREL QKTERGNKKR KLFGAGQYAD IAKAGRDRMP 
KKKKVGNRVV GDGVNAGIVL NVPNALPRGP AQYFVAGVSK PIPPTTISSL QAKQSAVLGI 
RPRRAGRPSS RFRTSRGDSA PSMTINGKPD GSKKRQPKHN FTQEELLLEA ALETEPENHR 
WLLSRQRIQD QQDRDAGPND RSHRRGGRVI ESYVSRRGAP NTITFPEMDY VPEILTQSSS 
AMLERLRIPT FCVVTGERAK YKDPLTGLEY SNAAAFKELR RRHASGELKP QSSKPKTKKT 
LSKAISTKAN VGKVAKPIPC GDGVSTGASN ASSEHGQNGE GSVPAKPADS RNTLTERASK 
LKRAATVTLY GTSPISSELD TAEREQPEEP HLSTTPPTDK SLPFSDDSKT PSLPASIAPR 
TNIKLLTKGG DADASTEIRE PLKSPKIVSF HVLSASKSSA FASQNHTIST AINSPTRSAT 
SPPSAPHTTS SARGSPDISG HRRASPRRRK PSSKLLETEY TPLAIPNSSS GEEVDKSSIP 
FETNAL